Wall clock time and date at job start Tue Mar 9 2021 12:59:34 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42897 * 1 3 3 C 1.35957 * 116.99817 * 2 1 4 4 C 1.38908 * 120.06014 * 179.97438 * 3 2 1 5 5 F 1.35100 * 120.05130 * 0.04787 * 4 3 2 6 6 C 1.38339 * 119.90041 * 179.76121 * 4 3 2 7 7 C 1.38257 * 120.03032 * 0.51583 * 6 4 3 8 8 C 1.50697 * 119.93529 * 179.76099 * 7 6 4 9 9 H 1.09006 * 112.84651 * 190.91649 * 8 7 6 10 10 C 1.53782 * 113.61907 * 322.22573 * 8 7 6 11 11 C 1.53780 * 87.08121 * 139.98046 * 10 8 7 12 12 H 1.09003 * 113.69207 * 220.00934 * 11 10 8 13 13 N 1.46499 * 113.61547 * 89.11616 * 11 10 8 14 14 C 1.34776 * 119.99941 * 107.49771 * 13 11 10 15 15 O 1.21283 * 120.00254 * 0.02562 * 14 13 11 16 16 C 1.50699 * 120.00405 * 180.02562 * 14 13 11 17 17 O 1.42894 * 109.47583 * 180.02562 * 16 14 13 18 18 C 1.35900 * 117.00370 * 179.97438 * 17 16 14 19 19 C 1.38708 * 120.05751 * 180.02562 * 18 17 16 20 20 C 1.50697 * 120.02761 * 0.02562 * 19 18 17 21 21 O 1.42902 * 109.46958 * 284.99588 * 20 19 18 22 22 Si 1.86304 * 109.47015 * 165.00056 * 20 19 18 23 23 C 1.38171 * 119.94045 * 180.02562 * 19 18 17 24 24 C 1.38240 * 120.06065 * 359.97438 * 23 19 18 25 25 C 1.38295 * 120.10794 * 0.02562 * 24 23 19 26 26 C 1.38119 * 120.05704 * 0.02562 * 25 24 23 27 27 C 1.53779 * 113.61332 * 59.72651 * 8 7 6 28 28 C 1.38257 * 120.12310 * 359.48454 * 7 6 4 29 29 C 1.38180 * 120.10117 * 0.25471 * 28 7 6 30 30 H 1.09003 * 109.46874 * 180.02562 * 1 2 3 31 31 H 1.09001 * 109.47045 * 300.00010 * 1 2 3 32 32 H 1.08991 * 109.47530 * 60.00458 * 1 2 3 33 33 H 1.08004 * 119.98435 * 180.27549 * 6 4 3 34 34 H 1.08998 * 113.60941 * 25.43362 * 10 8 7 35 35 H 1.08997 * 113.61075 * 254.53173 * 10 8 7 36 36 H 0.97002 * 120.00478 * 287.50595 * 13 11 10 37 37 H 1.09001 * 109.47049 * 59.99786 * 16 14 13 38 38 H 1.08998 * 109.46949 * 300.00530 * 16 14 13 39 39 H 1.08995 * 109.47425 * 44.99934 * 20 19 18 40 40 H 0.96706 * 113.99943 * 300.00487 * 21 20 19 41 41 H 1.48505 * 109.99877 * 179.97438 * 22 20 19 42 42 H 1.48497 * 109.99934 * 301.31494 * 22 20 19 43 43 H 1.08005 * 119.97011 * 180.02562 * 23 19 18 44 44 H 1.07995 * 119.94494 * 180.27435 * 24 23 19 45 45 H 1.07997 * 119.96986 * 179.97438 * 25 24 23 46 46 H 1.08001 * 120.02616 * 179.97438 * 26 25 24 47 47 H 1.09002 * 113.61624 * 105.46744 * 27 8 7 48 48 H 1.08999 * 113.61799 * 334.56280 * 27 8 7 49 49 H 1.08000 * 119.95164 * 180.23067 * 28 7 6 50 50 H 1.08000 * 120.01870 * 179.97438 * 29 28 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0462 1.2114 0.0000 4 6 3.4333 1.2856 0.0005 5 9 4.1713 0.1540 0.0001 6 6 4.0578 2.5200 -0.0045 7 6 3.3022 3.6778 0.0008 8 6 3.9848 5.0213 0.0008 9 1 3.2979 5.8450 0.1953 10 6 5.2602 5.0644 0.8590 11 6 5.8865 5.9197 -0.2550 12 1 6.9281 5.6744 -0.4624 13 7 5.6634 7.3578 -0.0864 14 6 6.6819 8.1587 0.2846 15 8 7.7832 7.6891 0.4784 16 6 6.4524 9.6379 0.4587 17 8 7.6741 10.2666 0.8515 18 6 7.6401 11.6104 1.0513 19 6 8.7901 12.2853 1.4334 20 6 10.0791 11.5290 1.6270 21 8 10.0233 10.7989 2.8542 22 14 11.5016 12.7308 1.6837 23 6 8.7527 13.6515 1.6363 24 6 7.5706 14.3459 1.4584 25 6 6.4227 13.6753 1.0774 26 6 6.4546 12.3095 0.8743 27 6 4.8924 5.2511 -1.2192 28 6 1.9215 3.6053 0.0003 29 6 1.2922 2.3751 -0.0002 30 1 -0.3633 -1.0277 0.0005 31 1 -0.3633 0.5138 0.8900 32 1 -0.3634 0.5137 -0.8899 33 1 5.1362 2.5792 -0.0085 34 1 5.7363 4.0917 0.9825 35 1 5.1347 5.5981 1.8010 36 1 4.7827 7.7335 -0.2416 37 1 5.6964 9.8004 1.2269 38 1 6.1106 10.0659 -0.4837 39 1 10.2218 10.8360 0.7980 40 1 9.8974 11.3534 3.6364 41 1 12.7787 11.9975 1.8749 42 1 11.5512 13.5187 0.4259 43 1 9.6479 14.1775 1.9335 44 1 7.5445 15.4143 1.6132 45 1 5.5004 14.2199 0.9394 46 1 5.5577 11.7862 0.5772 47 1 4.4700 5.9356 -1.9549 48 1 5.2680 4.3295 -1.6638 49 1 1.3340 4.5115 0.0006 50 1 0.2136 2.3200 -0.0001 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_9824364_2989392.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:59:34 Heat of formation + Delta-G solvation = -94.658445 kcal Electronic energy + Delta-G solvation = -34375.246739 eV Core-core repulsion = 29443.689069 eV Total energy + Delta-G solvation = -4931.557669 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 388.156 amu Computer time = 1.21 seconds Orbital eigenvalues (eV) -49.90345 -41.83363 -41.39532 -40.80340 -39.80722 -38.51626 -37.89130 -37.46620 -34.61921 -32.71343 -31.77842 -31.55355 -31.05773 -29.37062 -28.42883 -26.72515 -26.66860 -25.76220 -23.97895 -23.60270 -22.65921 -22.57719 -21.83560 -20.33361 -19.50292 -19.38790 -18.43371 -18.10980 -17.87720 -17.78319 -17.48799 -17.21223 -17.07401 -16.82255 -16.52018 -16.21476 -16.11516 -15.98604 -15.73981 -15.50866 -15.40741 -15.25881 -15.06881 -14.98236 -14.64213 -14.21729 -14.16623 -13.95042 -13.79261 -13.60094 -13.52894 -13.42975 -13.10744 -12.99793 -12.88801 -12.35530 -12.24939 -12.18565 -12.17557 -12.06696 -12.04906 -11.75711 -11.49790 -11.27506 -11.05695 -10.37594 -10.20747 -9.97375 -9.93882 -9.19803 -9.14232 -5.05469 0.07550 0.14785 0.26489 0.43993 1.28924 1.38673 1.45787 1.62170 1.95640 2.16645 2.45149 2.57761 2.73550 3.15829 3.43042 3.48733 3.56533 3.62894 3.66861 3.70391 3.76886 3.90088 3.91137 3.95802 3.98778 4.06238 4.15200 4.18372 4.24893 4.31916 4.33243 4.33445 4.38357 4.48762 4.54652 4.59983 4.67350 4.67962 4.75104 4.80411 4.85364 4.89726 4.99874 4.99930 5.05778 5.08789 5.17077 5.30791 5.40540 5.42031 5.55655 5.58709 5.63561 5.79192 6.24698 6.28200 6.45673 6.81900 7.10318 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.017 3.983 2 O -0.341 6.341 3 C 0.075 3.925 4 C 0.033 3.967 5 F -0.154 7.154 6 C -0.116 4.116 7 C -0.081 4.081 8 C -0.054 4.054 9 H 0.131 0.869 10 C -0.148 4.148 11 C 0.113 3.887 12 H 0.077 0.923 13 N -0.689 5.689 14 C 0.514 3.486 15 O -0.573 6.573 16 C 0.038 3.962 17 O -0.316 6.316 18 C 0.125 3.875 19 C -0.172 4.172 20 C -0.073 4.073 21 O -0.557 6.557 22 Si 0.794 3.206 23 C -0.079 4.079 24 C -0.154 4.154 25 C -0.076 4.076 26 C -0.213 4.213 27 C -0.125 4.125 28 C -0.075 4.075 29 C -0.179 4.179 30 H 0.113 0.887 31 H 0.071 0.929 32 H 0.072 0.928 33 H 0.146 0.854 34 H 0.088 0.912 35 H 0.072 0.928 36 H 0.423 0.577 37 H 0.125 0.875 38 H 0.124 0.876 39 H 0.078 0.922 40 H 0.391 0.609 41 H -0.304 1.304 42 H -0.281 1.281 43 H 0.157 0.843 44 H 0.154 0.846 45 H 0.154 0.846 46 H 0.155 0.845 47 H 0.098 0.902 48 H 0.094 0.906 49 H 0.167 0.833 50 H 0.162 0.838 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -11.536 9.086 -0.034 14.685 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.076 4.076 2 O -0.256 6.256 3 C 0.029 3.971 4 C 0.013 3.987 5 F -0.133 7.133 6 C -0.135 4.135 7 C -0.081 4.081 8 C -0.072 4.072 9 H 0.149 0.851 10 C -0.186 4.186 11 C 0.008 3.992 12 H 0.095 0.905 13 N -0.343 5.343 14 C 0.300 3.700 15 O -0.451 6.451 16 C -0.040 4.040 17 O -0.229 6.229 18 C 0.080 3.920 19 C -0.174 4.174 20 C -0.182 4.182 21 O -0.365 6.365 22 Si 0.699 3.301 23 C -0.096 4.096 24 C -0.172 4.172 25 C -0.094 4.094 26 C -0.231 4.231 27 C -0.162 4.162 28 C -0.093 4.093 29 C -0.197 4.197 30 H 0.132 0.868 31 H 0.090 0.910 32 H 0.091 0.909 33 H 0.164 0.836 34 H 0.107 0.893 35 H 0.091 0.909 36 H 0.262 0.738 37 H 0.142 0.858 38 H 0.141 0.859 39 H 0.096 0.904 40 H 0.240 0.760 41 H -0.233 1.233 42 H -0.208 1.208 43 H 0.174 0.826 44 H 0.172 0.828 45 H 0.172 0.828 46 H 0.172 0.828 47 H 0.116 0.884 48 H 0.113 0.887 49 H 0.184 0.816 50 H 0.180 0.820 Dipole moment (debyes) X Y Z Total from point charges -9.681 8.116 -0.653 12.650 hybrid contribution -0.545 -1.306 -0.494 1.499 sum -10.226 6.809 -1.148 12.339 Atomic orbital electron populations 1.23409 0.75694 1.05734 1.02813 1.86111 1.24139 1.26531 1.88791 1.19334 0.90852 0.86634 1.00310 1.17434 0.86754 0.83153 1.11349 1.91450 1.76926 1.50227 1.94672 1.21014 1.01592 0.89635 1.01260 1.19618 0.93528 0.94116 1.00851 1.21588 0.95156 0.93970 0.96496 0.85126 1.23583 0.96393 1.00548 0.98100 1.21849 1.00001 0.79583 0.97808 0.90453 1.45287 1.12886 1.06909 1.69243 1.20593 0.84401 0.88881 0.76132 1.90785 1.26314 1.77191 1.50769 1.22702 0.87283 0.89450 1.04591 1.86188 1.34410 1.19021 1.83322 1.19112 0.94883 0.81880 0.96150 1.19850 0.94706 0.94755 1.08041 1.25179 1.02753 1.01485 0.88751 1.86546 1.95998 1.37979 1.15960 0.94054 0.72665 0.78374 0.84985 1.21108 0.99660 0.91254 0.97604 1.21456 0.92189 1.01731 1.01815 1.21419 0.99632 0.93257 0.95058 1.21594 0.97084 0.96481 1.07970 1.23391 0.95020 1.01496 0.96342 1.21327 0.93730 0.98160 0.96068 1.21481 1.01535 0.90849 1.05848 0.86843 0.91022 0.90936 0.83640 0.89314 0.90880 0.73846 0.85787 0.85881 0.90408 0.76017 1.23291 1.20793 0.82644 0.82801 0.82803 0.82759 0.88377 0.88717 0.81590 0.82039 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.06 9.81 113.37 1.11 1.05 16 2 O -0.34 -2.26 10.36 -93.07 -0.96 -3.23 16 3 C 0.07 0.39 6.69 22.53 0.15 0.54 16 4 C 0.03 0.25 7.31 22.45 0.16 0.42 16 5 F -0.15 -1.99 17.11 44.97 0.77 -1.22 16 6 C -0.12 -0.24 8.57 22.30 0.19 -0.05 16 7 C -0.08 0.25 5.29 -19.86 -0.11 0.15 16 8 C -0.05 0.41 3.85 -11.02 -0.04 0.36 16 9 H 0.13 -1.68 8.09 -2.38 -0.02 -1.70 16 10 C -0.15 0.42 7.25 31.12 0.23 0.65 16 11 C 0.11 -0.21 4.32 45.52 0.20 -0.02 16 12 H 0.08 0.37 7.46 -2.39 -0.02 0.35 16 13 N -0.69 3.04 5.26 -440.03 -2.32 0.72 16 14 C 0.51 2.10 7.91 87.66 0.69 2.79 16 15 O -0.57 -9.83 16.10 16.00 0.26 -9.58 16 16 C 0.04 -0.06 5.22 71.24 0.37 0.31 16 17 O -0.32 -2.68 9.00 -73.39 -0.66 -3.35 16 18 C 0.13 0.58 6.66 22.51 0.15 0.73 16 19 C -0.17 -0.73 5.27 -19.77 -0.10 -0.84 16 20 C -0.07 -0.52 2.38 71.23 0.17 -0.35 16 21 O -0.56 -4.86 12.88 -148.98 -1.92 -6.78 16 22 Si 0.79 1.35 29.92 68.60 2.05 3.40 16 23 C -0.08 0.13 8.66 22.25 0.19 0.32 16 24 C -0.15 0.63 10.04 22.28 0.22 0.85 16 25 C -0.08 0.34 10.04 22.25 0.22 0.56 16 26 C -0.21 0.46 9.04 22.37 0.20 0.66 16 27 C -0.12 0.84 7.29 31.12 0.23 1.07 16 28 C -0.08 0.38 9.70 22.26 0.22 0.60 16 29 C -0.18 0.34 9.04 22.36 0.20 0.54 16 30 H 0.11 -0.66 8.14 -2.39 -0.02 -0.68 16 31 H 0.07 -0.45 7.66 -2.39 -0.02 -0.47 16 32 H 0.07 -0.47 7.66 -2.39 -0.02 -0.49 16 33 H 0.15 0.05 6.67 -2.91 -0.02 0.03 16 34 H 0.09 -0.10 6.32 -2.39 -0.02 -0.12 16 35 H 0.07 -0.12 8.14 -2.39 -0.02 -0.14 16 36 H 0.42 -5.51 8.70 -92.71 -0.81 -6.31 16 37 H 0.12 -1.03 7.66 -2.39 -0.02 -1.04 16 38 H 0.12 -1.03 7.66 -2.39 -0.02 -1.05 16 39 H 0.08 1.02 7.83 -2.39 -0.02 1.01 16 40 H 0.39 -0.53 8.70 -74.05 -0.64 -1.17 16 41 H -0.30 -2.99 7.11 99.48 0.71 -2.28 16 42 H -0.28 -1.54 7.11 99.48 0.71 -0.83 16 43 H 0.16 -1.09 5.13 -2.91 -0.01 -1.10 16 44 H 0.15 -1.41 8.06 -2.91 -0.02 -1.44 16 45 H 0.15 -1.52 8.06 -2.91 -0.02 -1.54 16 46 H 0.15 -1.32 6.30 -2.91 -0.02 -1.34 16 47 H 0.10 -0.97 8.14 -2.39 -0.02 -0.99 16 48 H 0.09 -0.47 7.71 -2.39 -0.02 -0.49 16 49 H 0.17 -1.97 8.05 -2.91 -0.02 -2.00 16 50 H 0.16 -1.17 6.30 -2.91 -0.02 -1.19 16 Total: 0.00 -36.14 417.65 1.48 -34.66 By element: Atomic # 1 Polarization: -24.59 SS G_CDS: -0.40 Total: -24.98 kcal Atomic # 6 Polarization: 5.69 SS G_CDS: 4.66 Total: 10.35 kcal Atomic # 7 Polarization: 3.04 SS G_CDS: -2.32 Total: 0.72 kcal Atomic # 8 Polarization: -19.64 SS G_CDS: -3.29 Total: -22.93 kcal Atomic # 9 Polarization: -1.99 SS G_CDS: 0.77 Total: -1.22 kcal Atomic # 14 Polarization: 1.35 SS G_CDS: 2.05 Total: 3.40 kcal Total: -36.14 1.48 -34.66 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_9824364_2989392.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -59.999 kcal (2) G-P(sol) polarization free energy of solvation -36.141 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -96.140 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.482 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -34.659 kcal (6) G-S(sol) free energy of system = (1) + (5) -94.658 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.21 seconds