Wall clock time and date at job start Tue Mar 9 2021 13:00:17 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42900 * 1 3 3 C 1.35981 * 117.00003 * 2 1 4 4 C 1.38674 * 119.99833 * 179.97438 * 3 2 1 5 5 C 1.38155 * 120.00288 * 180.02562 * 4 3 2 6 6 C 1.50692 * 120.00568 * 180.02562 * 5 4 3 7 7 O 1.42904 * 109.47480 * 104.97385 * 6 5 4 8 8 Si 1.86305 * 109.47031 * 344.97744 * 6 5 4 9 9 C 1.38685 * 119.99646 * 359.97438 * 5 4 3 10 10 O 1.35978 * 119.99782 * 180.02562 * 9 5 4 11 11 C 1.42897 * 116.99889 * 180.02562 * 10 9 5 12 12 C 1.50698 * 109.47551 * 179.97438 * 11 10 9 13 13 O 1.21282 * 119.99407 * 359.97438 * 12 11 10 14 14 N 1.34776 * 120.00491 * 179.97438 * 12 11 10 15 15 C 1.46501 * 120.00225 * 179.97438 * 14 12 11 16 16 H 1.09001 * 112.84549 * 23.80332 * 15 14 12 17 17 C 1.53778 * 113.61080 * 154.99864 * 15 14 12 18 18 C 1.53781 * 87.08008 * 89.20216 * 17 15 14 19 19 H 1.08995 * 113.61688 * 270.79162 * 18 17 15 20 20 C 1.50701 * 113.61402 * 139.97773 * 18 17 15 21 21 C 1.38260 * 119.93981 * 301.50828 * 20 18 17 22 22 C 1.38331 * 120.03136 * 179.97438 * 21 20 18 23 23 F 1.35099 * 120.04481 * 180.02562 * 22 21 20 24 24 C 1.38902 * 119.90564 * 0.04242 * 22 21 20 25 25 O 1.35957 * 120.06276 * 180.25070 * 24 22 21 26 26 C 1.42905 * 117.00134 * 179.72342 * 25 24 22 27 27 C 1.38665 * 119.87480 * 359.97438 * 24 22 21 28 28 C 1.38177 * 119.97029 * 0.02562 * 27 24 22 29 29 C 1.53781 * 87.17554 * 25.39031 * 18 17 15 30 30 C 1.38715 * 119.99616 * 0.27565 * 9 5 4 31 31 C 1.38110 * 120.00405 * 359.44719 * 30 9 5 32 32 H 1.09005 * 109.47077 * 60.00243 * 1 2 3 33 33 H 1.08997 * 109.47094 * 180.02562 * 1 2 3 34 34 H 1.09004 * 109.47099 * 300.00346 * 1 2 3 35 35 H 1.08009 * 120.00212 * 0.04278 * 4 3 2 36 36 H 1.09003 * 109.47518 * 224.98069 * 6 5 4 37 37 H 0.96703 * 113.99334 * 60.00633 * 7 6 5 38 38 H 1.48496 * 110.00239 * 178.68203 * 8 6 5 39 39 H 1.48495 * 109.99860 * 300.00076 * 8 6 5 40 40 H 1.09004 * 109.47646 * 59.99242 * 11 10 9 41 41 H 1.09004 * 109.47290 * 299.99532 * 11 10 9 42 42 H 0.97003 * 119.99647 * 359.97438 * 14 12 11 43 43 H 1.08995 * 113.62042 * 334.65592 * 17 15 14 44 44 H 1.08999 * 113.68890 * 203.75935 * 17 15 14 45 45 H 1.08004 * 119.97931 * 359.97438 * 21 20 18 46 46 H 1.08998 * 109.46899 * 300.00351 * 26 25 24 47 47 H 1.08998 * 109.46995 * 60.00320 * 26 25 24 48 48 H 1.08997 * 109.47223 * 180.02562 * 26 25 24 49 49 H 1.07998 * 120.01450 * 179.97438 * 27 24 22 50 50 H 1.08001 * 119.95230 * 180.02562 * 28 27 24 51 51 H 1.08997 * 113.61737 * 89.15659 * 29 18 17 52 52 H 1.09002 * 113.61567 * 220.06585 * 29 18 17 53 53 H 1.08004 * 119.99593 * 179.70227 * 30 9 5 54 54 H 1.07995 * 120.00281 * 180.25135 * 31 30 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0463 1.2116 0.0000 4 6 3.4312 1.2841 0.0005 5 6 4.0585 2.5151 0.0011 6 6 5.5633 2.5939 0.0011 7 8 6.0209 2.9671 -1.3003 8 14 6.2723 0.9321 0.4556 9 6 3.3032 3.6782 0.0005 10 8 3.9206 4.8897 0.0005 11 6 3.0807 6.0458 0.0005 12 6 3.9348 7.2873 0.0012 13 8 5.1438 7.1915 0.0021 14 7 3.3553 8.5041 0.0008 15 6 4.1857 9.7111 0.0019 16 1 5.1832 9.5388 -0.4024 17 6 3.4834 10.9424 -0.5941 18 6 2.9654 11.2356 0.8238 19 1 2.0127 10.7560 1.0485 20 6 2.9826 12.6993 1.1822 21 6 4.1715 13.4041 1.1484 22 6 4.1894 14.7478 1.4765 23 9 5.3509 15.4369 1.4431 24 6 3.0114 15.3874 1.8407 25 8 3.0244 16.7092 2.1588 26 6 1.7749 17.3024 2.5180 27 6 1.8212 14.6767 1.8736 28 6 1.8093 13.3347 1.5449 29 6 4.1849 10.4589 1.3477 30 6 1.9179 3.6055 0.0052 31 6 1.2909 2.3750 -0.0011 32 1 -0.3633 0.5138 -0.8900 33 1 -0.3633 -1.0276 0.0005 34 1 -0.3633 0.5139 0.8900 35 1 4.0194 0.3783 0.0003 36 1 5.8882 3.3386 0.7278 37 1 5.6903 3.8241 -1.6026 38 1 7.7560 0.9881 0.4282 39 1 5.8040 0.5326 1.8070 40 1 2.4513 6.0378 0.8905 41 1 2.4514 6.0378 -0.8895 42 1 2.3883 8.5807 -0.0003 43 1 2.6948 10.6943 -1.3044 44 1 4.1714 11.6985 -0.9726 45 1 5.0868 12.9052 0.8657 46 1 1.0757 17.2079 1.6871 47 1 1.3699 16.7945 3.3932 48 1 1.9260 18.3572 2.7471 49 1 0.9041 15.1717 2.1568 50 1 0.8821 12.7815 1.5702 51 1 5.0661 11.0816 1.5016 52 1 3.9617 9.8207 2.2027 53 1 1.3297 4.5113 0.0097 54 1 0.2124 2.3185 -0.0015 There are 77 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 77 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_9824364_4974302.mol2 54 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:00:17 Heat of formation + Delta-G solvation = -131.522947 kcal Electronic energy + Delta-G solvation = -38726.432531 eV Core-core repulsion = 33319.056485 eV Total energy + Delta-G solvation = -5407.376045 eV No. of doubly occupied orbitals = 77 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 418.172 amu Computer time = 1.30 seconds Orbital eigenvalues (eV) -49.90156 -41.90197 -41.56729 -40.90809 -40.17286 -39.52033 -38.19259 -37.85290 -36.91772 -34.59434 -32.80727 -31.77590 -31.52269 -30.87830 -29.38502 -28.44364 -27.93738 -26.70954 -26.58927 -25.75152 -24.02092 -23.71799 -22.64433 -22.40602 -21.88007 -20.32182 -19.54094 -19.40570 -18.81899 -18.50703 -18.11444 -17.94225 -17.80285 -17.48684 -17.37441 -17.21113 -16.91869 -16.59691 -16.23402 -16.11431 -16.06305 -15.80841 -15.69248 -15.55777 -15.45139 -15.34521 -15.17965 -14.77028 -14.45629 -14.22832 -14.11825 -14.07773 -13.93768 -13.58959 -13.53203 -13.50917 -13.41007 -13.10409 -13.02840 -12.89005 -12.50500 -12.30450 -12.23663 -12.17373 -12.05094 -12.01825 -11.48880 -11.43333 -11.30760 -11.25992 -11.23523 -11.00833 -10.18234 -10.08717 -9.97050 -9.13968 -8.81198 -4.93931 0.07488 0.07758 0.15035 0.34402 1.33328 1.41535 1.43446 1.57696 1.91325 2.16669 2.36008 2.45433 2.54972 2.57596 3.16220 3.44466 3.47093 3.55193 3.63995 3.67606 3.71260 3.75033 3.86082 3.91355 3.96271 3.96623 4.09629 4.10411 4.14379 4.18676 4.21711 4.25614 4.28667 4.32067 4.32854 4.46163 4.46807 4.49363 4.61720 4.67762 4.71589 4.76642 4.80876 4.81883 4.86703 4.90182 4.98121 5.01277 5.06163 5.10016 5.13261 5.18090 5.21862 5.41531 5.44284 5.60014 5.64133 6.14132 6.24677 6.41959 6.47587 6.52236 7.12361 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.017 3.983 2 O -0.334 6.334 3 C 0.090 3.910 4 C -0.119 4.119 5 C -0.119 4.119 6 C -0.081 4.081 7 O -0.545 6.545 8 Si 0.810 3.190 9 C 0.090 3.910 10 O -0.317 6.317 11 C 0.038 3.962 12 C 0.515 3.485 13 O -0.572 6.572 14 N -0.690 5.690 15 C 0.115 3.885 16 H 0.079 0.921 17 C -0.125 4.125 18 C -0.055 4.055 19 H 0.131 0.869 20 C -0.081 4.081 21 C -0.116 4.116 22 C 0.032 3.968 23 F -0.154 7.154 24 C 0.074 3.926 25 O -0.342 6.342 26 C 0.018 3.982 27 C -0.179 4.179 28 C -0.076 4.076 29 C -0.148 4.148 30 C -0.158 4.158 31 C -0.161 4.161 32 H 0.068 0.932 33 H 0.114 0.886 34 H 0.066 0.934 35 H 0.151 0.849 36 H 0.061 0.939 37 H 0.372 0.628 38 H -0.295 1.295 39 H -0.264 1.264 40 H 0.124 0.876 41 H 0.129 0.871 42 H 0.423 0.577 43 H 0.098 0.902 44 H 0.094 0.906 45 H 0.147 0.853 46 H 0.072 0.928 47 H 0.071 0.929 48 H 0.113 0.887 49 H 0.161 0.839 50 H 0.166 0.834 51 H 0.087 0.913 52 H 0.072 0.928 53 H 0.170 0.830 54 H 0.162 0.838 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -15.595 0.383 -0.378 15.604 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.077 4.077 2 O -0.248 6.248 3 C 0.045 3.955 4 C -0.137 4.137 5 C -0.120 4.120 6 C -0.188 4.188 7 O -0.351 6.351 8 Si 0.711 3.289 9 C 0.045 3.955 10 O -0.231 6.231 11 C -0.040 4.040 12 C 0.301 3.699 13 O -0.450 6.450 14 N -0.344 5.344 15 C 0.010 3.990 16 H 0.098 0.902 17 C -0.163 4.163 18 C -0.073 4.073 19 H 0.149 0.851 20 C -0.081 4.081 21 C -0.135 4.135 22 C 0.013 3.987 23 F -0.133 7.133 24 C 0.028 3.972 25 O -0.256 6.256 26 C -0.076 4.076 27 C -0.198 4.198 28 C -0.093 4.093 29 C -0.187 4.187 30 C -0.177 4.177 31 C -0.180 4.180 32 H 0.087 0.913 33 H 0.132 0.868 34 H 0.085 0.915 35 H 0.168 0.832 36 H 0.079 0.921 37 H 0.220 0.780 38 H -0.223 1.223 39 H -0.190 1.190 40 H 0.142 0.858 41 H 0.146 0.854 42 H 0.261 0.739 43 H 0.116 0.884 44 H 0.112 0.888 45 H 0.164 0.836 46 H 0.091 0.909 47 H 0.090 0.910 48 H 0.131 0.869 49 H 0.179 0.821 50 H 0.184 0.816 51 H 0.106 0.894 52 H 0.091 0.909 53 H 0.187 0.813 54 H 0.179 0.821 Dipole moment (debyes) X Y Z Total from point charges -13.478 -0.658 0.222 13.496 hybrid contribution -0.370 2.495 0.543 2.580 sum -13.848 1.836 0.765 13.990 Atomic orbital electron populations 1.23358 0.76366 1.05602 1.02398 1.86088 1.23414 1.26356 1.88938 1.18981 0.91917 0.85397 0.99213 1.20178 0.92469 0.96762 1.04303 1.19446 0.95950 0.91070 1.05581 1.25492 0.92934 1.12399 0.87990 1.86663 1.74233 1.42241 1.32005 0.92242 0.76233 0.79108 0.81317 1.18789 0.91761 0.84195 1.00750 1.86085 1.35613 1.11967 1.89450 1.22728 0.92560 0.81718 1.06994 1.20561 0.88309 0.85492 0.75506 1.90782 1.16897 1.87333 1.49965 1.45295 1.11141 1.03463 1.74477 1.21859 0.95498 0.84040 0.97635 0.90235 1.23386 1.00924 0.95603 0.96411 1.21599 1.00051 0.89483 0.96171 0.85147 1.19638 0.91783 0.96325 1.00360 1.21011 1.00966 0.90550 1.00927 1.17441 0.80081 0.91408 1.09789 1.91451 1.47074 1.79908 1.94851 1.19341 0.94084 0.84621 0.99149 1.86112 1.36352 1.20382 1.82759 1.23406 0.83505 0.99643 1.01079 1.21480 0.96536 0.96191 1.05558 1.21334 0.99134 0.93283 0.95582 1.23613 0.98936 0.98651 0.97456 1.21381 0.91976 1.00064 1.04248 1.21426 1.01612 0.90909 1.04007 0.91350 0.86804 0.91510 0.83172 0.92098 0.77974 1.22262 1.18970 0.85796 0.85380 0.73855 0.88352 0.88786 0.83580 0.90938 0.91037 0.86866 0.82109 0.81603 0.89425 0.90878 0.81314 0.82053 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.11 9.81 113.37 1.11 1.00 16 2 O -0.33 -0.55 10.50 -93.34 -0.98 -1.53 16 3 C 0.09 0.18 6.68 22.49 0.15 0.33 16 4 C -0.12 -0.48 8.59 22.35 0.19 -0.29 16 5 C -0.12 -0.67 5.28 -19.78 -0.10 -0.77 16 6 C -0.08 -0.65 2.33 71.23 0.17 -0.48 16 7 O -0.55 -5.37 12.65 -148.98 -1.89 -7.25 16 8 Si 0.81 4.39 30.17 68.60 2.07 6.46 16 9 C 0.09 0.23 6.62 22.49 0.15 0.38 16 10 O -0.32 -1.13 8.56 -74.26 -0.64 -1.76 16 11 C 0.04 -0.22 5.22 71.24 0.37 0.15 16 12 C 0.51 0.09 7.91 87.66 0.69 0.78 16 13 O -0.57 -7.19 16.10 16.00 0.26 -6.93 16 14 N -0.69 5.00 5.26 -439.76 -2.31 2.69 16 15 C 0.12 -0.48 4.33 45.58 0.20 -0.28 16 16 H 0.08 0.18 7.46 -2.39 -0.02 0.16 16 17 C -0.13 1.05 7.29 31.12 0.23 1.27 16 18 C -0.06 0.49 3.85 -11.01 -0.04 0.45 16 19 H 0.13 -1.86 8.08 -2.39 -0.02 -1.88 16 20 C -0.08 0.33 5.29 -19.85 -0.11 0.23 16 21 C -0.12 -0.13 8.51 22.30 0.19 0.06 16 22 C 0.03 0.23 7.31 22.45 0.16 0.39 16 23 F -0.15 -1.90 17.11 44.97 0.77 -1.13 16 24 C 0.07 0.35 6.69 22.53 0.15 0.50 16 25 O -0.34 -2.12 10.36 -93.07 -0.96 -3.09 16 26 C 0.02 -0.07 9.81 113.37 1.11 1.05 16 27 C -0.18 0.44 9.04 22.36 0.20 0.65 16 28 C -0.08 0.44 9.70 22.26 0.22 0.66 16 29 C -0.15 0.68 7.27 31.18 0.23 0.91 16 30 C -0.16 0.57 9.03 22.35 0.20 0.77 16 31 C -0.16 0.46 9.03 22.35 0.20 0.66 16 32 H 0.07 -0.61 7.66 -2.38 -0.02 -0.63 16 33 H 0.11 -1.02 8.14 -2.39 -0.02 -1.04 16 34 H 0.07 -0.58 7.66 -2.39 -0.02 -0.60 16 35 H 0.15 0.22 5.13 -2.91 -0.01 0.20 16 36 H 0.06 0.65 7.82 -2.39 -0.02 0.63 16 37 H 0.37 2.69 8.59 -74.06 -0.64 2.05 16 38 H -0.29 -3.51 7.11 99.48 0.71 -2.80 16 39 H -0.26 -1.93 7.11 99.48 0.71 -1.22 16 40 H 0.12 -1.50 7.65 -2.39 -0.02 -1.52 16 41 H 0.13 -1.62 7.67 -2.38 -0.02 -1.64 16 42 H 0.42 -6.59 8.70 -92.71 -0.81 -7.40 16 43 H 0.10 -1.13 8.14 -2.39 -0.02 -1.15 16 44 H 0.09 -0.60 7.64 -2.39 -0.02 -0.62 16 45 H 0.15 -0.10 6.72 -2.91 -0.02 -0.12 16 46 H 0.07 -0.50 7.67 -2.39 -0.02 -0.52 16 47 H 0.07 -0.48 7.66 -2.39 -0.02 -0.50 16 48 H 0.11 -0.69 8.14 -2.39 -0.02 -0.71 16 49 H 0.16 -1.24 6.30 -2.91 -0.02 -1.26 16 50 H 0.17 -2.10 8.05 -2.91 -0.02 -2.12 16 51 H 0.09 -0.23 6.39 -2.39 -0.02 -0.24 16 52 H 0.07 -0.26 8.14 -2.39 -0.02 -0.28 16 53 H 0.17 -1.97 6.29 -2.91 -0.02 -1.99 16 54 H 0.16 -1.41 6.29 -2.91 -0.02 -1.43 16 Total: 0.00 -32.32 446.53 1.57 -30.75 By element: Atomic # 1 Polarization: -26.20 SS G_CDS: -0.42 Total: -26.62 kcal Atomic # 6 Polarization: 2.74 SS G_CDS: 5.67 Total: 8.41 kcal Atomic # 7 Polarization: 5.00 SS G_CDS: -2.31 Total: 2.69 kcal Atomic # 8 Polarization: -16.36 SS G_CDS: -4.21 Total: -20.56 kcal Atomic # 9 Polarization: -1.90 SS G_CDS: 0.77 Total: -1.13 kcal Atomic # 14 Polarization: 4.39 SS G_CDS: 2.07 Total: 6.46 kcal Total: -32.32 1.57 -30.75 kcal The number of atoms in the molecule is 54 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_9824364_4974302.mol2 54 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -100.770 kcal (2) G-P(sol) polarization free energy of solvation -32.323 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -133.093 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.570 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -30.753 kcal (6) G-S(sol) free energy of system = (1) + (5) -131.523 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.30 seconds