Wall clock time and date at job start Tue Mar 9 2021 13:00:29 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42899 * 1 3 3 C 1.35952 * 116.99882 * 2 1 4 4 C 1.38906 * 120.06260 * 179.97438 * 3 2 1 5 5 F 1.35104 * 120.04747 * 359.97438 * 4 3 2 6 6 C 1.38333 * 119.90603 * 180.25581 * 4 3 2 7 7 C 1.38258 * 120.02906 * 359.46982 * 6 4 3 8 8 C 1.50697 * 119.93784 * 180.25784 * 7 6 4 9 9 H 1.09000 * 112.85016 * 169.05824 * 8 7 6 10 10 C 1.53781 * 113.61442 * 300.25366 * 8 7 6 11 11 C 1.53782 * 87.08235 * 139.98348 * 10 8 7 12 12 H 1.09006 * 113.61358 * 220.02045 * 11 10 8 13 13 N 1.46499 * 113.61563 * 89.20227 * 11 10 8 14 14 C 1.34769 * 120.00138 * 155.00057 * 13 11 10 15 15 O 1.21287 * 120.00171 * 0.02562 * 14 13 11 16 16 C 1.50696 * 120.00339 * 179.97438 * 14 13 11 17 17 O 1.42896 * 109.47407 * 180.02562 * 16 14 13 18 18 C 1.36005 * 117.00246 * 179.97438 * 17 16 14 19 19 C 1.39148 * 120.07543 * 179.97438 * 18 17 16 20 20 O 1.36001 * 120.07189 * 359.97438 * 19 18 17 21 21 C 1.42904 * 116.99602 * 179.97438 * 20 19 18 22 22 C 1.38566 * 119.85416 * 180.02562 * 19 18 17 23 23 C 1.38240 * 119.99859 * 0.02562 * 22 19 18 24 24 C 1.50697 * 119.92414 * 179.97438 * 23 22 19 25 25 O 1.42905 * 109.47279 * 64.99942 * 24 23 22 26 26 Si 1.86299 * 109.46942 * 184.99484 * 24 23 22 27 27 C 1.38255 * 120.14464 * 359.96610 * 23 22 19 28 28 C 1.38240 * 120.14637 * 359.77581 * 27 23 22 29 29 C 1.53777 * 87.07998 * 334.56715 * 11 10 8 30 30 C 1.38262 * 120.12565 * 0.50974 * 7 6 4 31 31 C 1.38186 * 120.09296 * 359.76910 * 30 7 6 32 32 H 1.08999 * 109.47508 * 179.97438 * 1 2 3 33 33 H 1.09005 * 109.47399 * 300.00148 * 1 2 3 34 34 H 1.09001 * 109.47166 * 60.00196 * 1 2 3 35 35 H 1.07999 * 119.98652 * 179.70364 * 6 4 3 36 36 H 1.09005 * 113.61662 * 254.53261 * 10 8 7 37 37 H 1.09000 * 113.61468 * 25.43779 * 10 8 7 38 38 H 0.97001 * 120.00136 * 334.99962 * 13 11 10 39 39 H 1.08998 * 109.47196 * 300.00134 * 16 14 13 40 40 H 1.09002 * 109.47174 * 59.99815 * 16 14 13 41 41 H 1.09001 * 109.47054 * 60.00517 * 21 20 19 42 42 H 1.09001 * 109.46549 * 179.97438 * 21 20 19 43 43 H 1.08994 * 109.47387 * 300.00022 * 21 20 19 44 44 H 1.08006 * 119.99889 * 179.97438 * 22 19 18 45 45 H 1.08999 * 109.47307 * 304.99160 * 24 23 22 46 46 H 0.96692 * 114.00404 * 59.99736 * 25 24 23 47 47 H 1.48502 * 110.00349 * 179.97438 * 26 24 23 48 48 H 1.48501 * 109.99922 * 301.31803 * 26 24 23 49 49 H 1.08001 * 119.92295 * 180.02562 * 27 23 22 50 50 H 1.08000 * 119.99712 * 180.25324 * 28 27 23 51 51 H 1.08998 * 113.62002 * 270.88146 * 29 11 10 52 52 H 1.09003 * 113.61854 * 139.97986 * 29 11 10 53 53 H 1.07996 * 119.95254 * 179.74333 * 30 7 6 54 54 H 1.07996 * 120.01416 * 179.97438 * 31 30 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0462 1.2114 0.0000 4 6 3.4332 1.2856 0.0005 5 9 4.1713 0.1539 0.0016 6 6 4.0579 2.5199 0.0059 7 6 3.3023 3.6777 -0.0004 8 6 3.9849 5.0212 -0.0004 9 1 3.2983 5.8448 -0.1962 10 6 4.8912 5.2517 1.2204 11 6 5.8863 5.9198 0.2569 12 1 6.9277 5.6734 0.4647 13 7 5.6648 7.3581 0.0887 14 6 6.6841 8.1582 -0.2815 15 8 7.7849 7.6874 -0.4759 16 6 6.4561 9.6377 -0.4552 17 8 7.6783 10.2651 -0.8484 18 6 7.6454 11.6099 -1.0490 19 6 8.7993 12.2861 -1.4327 20 8 9.9628 11.6039 -1.6074 21 6 11.1071 12.3634 -2.0023 22 6 8.7607 13.6564 -1.6353 23 6 7.5776 14.3485 -1.4557 24 6 7.5376 15.8388 -1.6760 25 8 7.7945 16.1239 -3.0526 26 14 5.8556 16.4904 -1.2103 27 6 6.4310 13.6765 -1.0747 28 6 6.4615 12.3088 -0.8761 29 6 5.2612 5.0638 -0.8572 30 6 1.9216 3.6053 -0.0014 31 6 1.2923 2.3751 -0.0009 32 1 -0.3634 -1.0276 -0.0005 33 1 -0.3634 0.5139 0.8900 34 1 -0.3633 0.5138 -0.8900 35 1 5.1362 2.5791 0.0112 36 1 4.4681 5.9367 1.9552 37 1 5.2664 4.3304 1.6659 38 1 4.7844 7.7346 0.2437 39 1 5.7006 9.8011 -1.2237 40 1 6.1143 10.0657 0.4872 41 1 11.3210 13.1182 -1.2455 42 1 11.9655 11.6996 -2.1057 43 1 10.9077 12.8515 -2.9562 44 1 9.6551 14.1837 -1.9327 45 1 8.2968 16.3179 -1.0578 46 1 7.1564 15.7282 -3.6619 47 1 5.8032 17.9592 -1.4224 48 1 4.8087 15.8217 -2.0240 49 1 5.5086 14.2207 -0.9358 50 1 5.5635 11.7856 -0.5824 51 1 5.7375 4.0910 -0.9798 52 1 5.1368 5.5969 -1.7998 53 1 1.3341 4.5115 -0.0021 54 1 0.2137 2.3200 -0.0013 There are 77 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 77 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_9824364_60476.mol2 54 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:00:29 Heat of formation + Delta-G solvation = -127.191883 kcal Electronic energy + Delta-G solvation = -38434.346044 eV Core-core repulsion = 33027.157808 eV Total energy + Delta-G solvation = -5407.188236 eV No. of doubly occupied orbitals = 77 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 418.172 amu Computer time = 1.45 seconds Orbital eigenvalues (eV) -49.88020 -41.87497 -41.56054 -40.88200 -39.99374 -39.17779 -38.89391 -37.89801 -37.00359 -34.55894 -32.07858 -31.75323 -31.50822 -31.26098 -29.47602 -28.49644 -28.36602 -26.67598 -26.25528 -25.65085 -23.93610 -23.60506 -22.73024 -22.47954 -21.81271 -20.29082 -19.79874 -19.39264 -18.57757 -18.44685 -18.07449 -17.83178 -17.77377 -17.49867 -17.19584 -17.18148 -16.84383 -16.66555 -16.18057 -16.12232 -16.09578 -15.91126 -15.79475 -15.71944 -15.49272 -15.38112 -15.19633 -14.85947 -14.57293 -14.30619 -14.13993 -13.91433 -13.76648 -13.59280 -13.52224 -13.49426 -13.39627 -13.07622 -12.86671 -12.61722 -12.57817 -12.22770 -12.15957 -12.14075 -12.12675 -12.01044 -11.98119 -11.61038 -11.45695 -11.22673 -10.99450 -10.59999 -10.14556 -9.94730 -9.77394 -9.11718 -8.90866 -4.87276 0.10049 0.17385 0.18203 0.29337 1.34433 1.46156 1.48743 1.64171 2.00776 2.18573 2.32077 2.47838 2.56826 2.58261 3.18433 3.42095 3.47495 3.53867 3.66993 3.67236 3.71434 3.73742 3.87417 3.92181 3.94635 3.99838 4.06652 4.15377 4.15922 4.21296 4.28006 4.29647 4.31023 4.34042 4.34454 4.37062 4.51740 4.58036 4.64261 4.66434 4.67317 4.69367 4.79802 4.85181 4.89976 4.92631 5.02341 5.04596 5.08934 5.12801 5.13957 5.21073 5.38530 5.46043 5.60450 5.63294 5.66757 5.98457 6.26697 6.43854 6.50427 6.56448 7.17749 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.018 3.982 2 O -0.342 6.342 3 C 0.074 3.926 4 C 0.032 3.968 5 F -0.154 7.154 6 C -0.116 4.116 7 C -0.080 4.080 8 C -0.055 4.055 9 H 0.132 0.868 10 C -0.125 4.125 11 C 0.114 3.886 12 H 0.078 0.922 13 N -0.689 5.689 14 C 0.514 3.486 15 O -0.574 6.574 16 C 0.035 3.965 17 O -0.315 6.315 18 C 0.086 3.914 19 C 0.076 3.924 20 O -0.335 6.335 21 C 0.021 3.979 22 C -0.152 4.152 23 C -0.116 4.116 24 C -0.086 4.086 25 O -0.551 6.551 26 Si 0.777 3.223 27 C -0.111 4.111 28 C -0.159 4.159 29 C -0.148 4.148 30 C -0.075 4.075 31 C -0.179 4.179 32 H 0.113 0.887 33 H 0.072 0.928 34 H 0.071 0.929 35 H 0.146 0.854 36 H 0.099 0.901 37 H 0.093 0.907 38 H 0.424 0.576 39 H 0.128 0.872 40 H 0.132 0.868 41 H 0.066 0.934 42 H 0.110 0.890 43 H 0.062 0.938 44 H 0.140 0.860 45 H 0.121 0.879 46 H 0.386 0.614 47 H -0.308 1.308 48 H -0.273 1.273 49 H 0.158 0.842 50 H 0.178 0.822 51 H 0.088 0.912 52 H 0.072 0.928 53 H 0.167 0.833 54 H 0.161 0.839 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -11.056 5.066 3.687 12.708 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.076 4.076 2 O -0.256 6.256 3 C 0.028 3.972 4 C 0.013 3.987 5 F -0.133 7.133 6 C -0.135 4.135 7 C -0.081 4.081 8 C -0.073 4.073 9 H 0.150 0.850 10 C -0.162 4.162 11 C 0.008 3.992 12 H 0.096 0.904 13 N -0.343 5.343 14 C 0.300 3.700 15 O -0.452 6.452 16 C -0.043 4.043 17 O -0.229 6.229 18 C 0.040 3.960 19 C 0.030 3.970 20 O -0.250 6.250 21 C -0.074 4.074 22 C -0.171 4.171 23 C -0.116 4.116 24 C -0.194 4.194 25 O -0.359 6.359 26 Si 0.682 3.318 27 C -0.129 4.129 28 C -0.177 4.177 29 C -0.187 4.187 30 C -0.093 4.093 31 C -0.198 4.198 32 H 0.131 0.869 33 H 0.091 0.909 34 H 0.090 0.910 35 H 0.164 0.836 36 H 0.117 0.883 37 H 0.112 0.888 38 H 0.263 0.737 39 H 0.146 0.854 40 H 0.149 0.851 41 H 0.084 0.916 42 H 0.128 0.872 43 H 0.080 0.920 44 H 0.158 0.842 45 H 0.139 0.861 46 H 0.235 0.765 47 H -0.236 1.236 48 H -0.199 1.199 49 H 0.175 0.825 50 H 0.195 0.805 51 H 0.106 0.894 52 H 0.091 0.909 53 H 0.184 0.816 54 H 0.179 0.821 Dipole moment (debyes) X Y Z Total from point charges -10.168 4.867 3.542 11.816 hybrid contribution 0.415 -0.636 -1.412 1.603 sum -9.753 4.231 2.130 10.843 Atomic orbital electron populations 1.23405 0.75721 1.05700 1.02806 1.86109 1.24117 1.26581 1.88814 1.19340 0.90878 0.86621 1.00390 1.17445 0.86742 0.83184 1.11373 1.91451 1.76926 1.50247 1.94677 1.21018 1.01611 0.89609 1.01237 1.19637 0.93498 0.94185 1.00731 1.21603 0.95182 0.93894 0.96598 0.85038 1.23389 0.95013 1.01510 0.96334 1.21827 1.00011 0.79663 0.97651 0.90400 1.45275 1.12923 1.06815 1.69278 1.20607 0.84346 0.88934 0.76090 1.90785 1.26415 1.77185 1.50844 1.22789 0.87025 0.89364 1.05111 1.86226 1.34696 1.18098 1.83891 1.18590 0.93133 0.82646 1.01582 1.18687 0.85673 0.90871 1.01737 1.86193 1.17183 1.37573 1.84023 1.23278 0.86162 0.97823 1.00127 1.21019 1.00433 0.91070 1.04584 1.20110 0.93300 0.96433 1.01801 1.25322 1.15306 0.93429 0.85339 1.86572 1.56194 1.76930 1.16213 0.93971 0.72127 0.75663 0.90055 1.21050 0.98206 0.93895 0.99712 1.21385 0.96532 0.95145 1.04617 1.23588 0.96408 1.00555 0.98152 1.21335 0.93770 0.98125 0.96061 1.21480 1.01510 0.90888 1.05883 0.86889 0.90927 0.91046 0.83595 0.88264 0.88810 0.73750 0.85428 0.85075 0.91553 0.87150 0.91986 0.84209 0.86125 0.76462 1.23626 1.19870 0.82468 0.80507 0.89406 0.90880 0.81551 0.82111 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.06 9.81 113.37 1.11 1.05 16 2 O -0.34 -2.16 10.36 -93.01 -0.96 -3.13 16 3 C 0.07 0.36 6.69 22.53 0.15 0.51 16 4 C 0.03 0.23 7.31 22.45 0.16 0.40 16 5 F -0.15 -1.92 17.11 44.97 0.77 -1.15 16 6 C -0.12 -0.16 8.57 22.30 0.19 0.03 16 7 C -0.08 0.31 5.29 -19.85 -0.11 0.21 16 8 C -0.05 0.47 3.86 -11.01 -0.04 0.43 16 9 H 0.13 -1.85 8.09 -2.39 -0.02 -1.87 16 10 C -0.12 0.99 7.29 31.12 0.23 1.22 16 11 C 0.11 -0.38 4.32 45.52 0.20 -0.18 16 12 H 0.08 0.26 7.47 -2.38 -0.02 0.24 16 13 N -0.69 4.27 5.27 -440.05 -2.32 1.95 16 14 C 0.51 1.12 7.91 87.66 0.69 1.82 16 15 O -0.57 -8.88 16.10 15.99 0.26 -8.62 16 16 C 0.03 -0.14 5.22 71.23 0.37 0.23 16 17 O -0.32 -2.40 9.45 -67.19 -0.64 -3.04 16 18 C 0.09 0.40 6.70 22.57 0.15 0.55 16 19 C 0.08 0.57 6.70 22.57 0.15 0.72 16 20 O -0.34 -3.67 10.28 -79.70 -0.82 -4.49 16 21 C 0.02 0.05 9.81 113.37 1.11 1.16 16 22 C -0.15 -0.50 8.67 22.35 0.19 -0.31 16 23 C -0.12 0.07 5.35 -19.86 -0.11 -0.04 16 24 C -0.09 0.16 2.80 71.23 0.20 0.36 16 25 O -0.55 -0.96 12.83 -148.98 -1.91 -2.87 16 26 Si 0.78 -3.61 29.88 68.60 2.05 -1.56 16 27 C -0.11 0.46 8.66 22.27 0.19 0.65 16 28 C -0.16 0.59 9.04 22.35 0.20 0.79 16 29 C -0.15 0.60 7.25 31.12 0.23 0.82 16 30 C -0.08 0.43 9.70 22.26 0.22 0.65 16 31 C -0.18 0.43 9.04 22.36 0.20 0.63 16 32 H 0.11 -0.68 8.14 -2.39 -0.02 -0.70 16 33 H 0.07 -0.49 7.66 -2.38 -0.02 -0.51 16 34 H 0.07 -0.47 7.66 -2.39 -0.02 -0.49 16 35 H 0.15 -0.06 6.67 -2.91 -0.02 -0.08 16 36 H 0.10 -1.12 8.14 -2.38 -0.02 -1.14 16 37 H 0.09 -0.57 7.71 -2.39 -0.02 -0.58 16 38 H 0.42 -6.36 8.70 -92.71 -0.81 -7.17 16 39 H 0.13 -1.43 7.65 -2.39 -0.02 -1.45 16 40 H 0.13 -1.52 7.68 -2.39 -0.02 -1.54 16 41 H 0.07 -0.02 7.66 -2.39 -0.02 -0.04 16 42 H 0.11 -0.01 8.14 -2.39 -0.02 -0.03 16 43 H 0.06 0.03 7.67 -2.39 -0.02 0.01 16 44 H 0.14 0.28 6.30 -2.91 -0.02 0.26 16 45 H 0.12 -0.35 7.96 -2.39 -0.02 -0.37 16 46 H 0.39 -1.53 8.70 -74.06 -0.64 -2.17 16 47 H -0.31 -1.20 7.11 99.48 0.71 -0.49 16 48 H -0.27 0.66 7.01 99.48 0.70 1.36 16 49 H 0.16 -1.50 4.83 -2.91 -0.01 -1.51 16 50 H 0.18 -2.19 6.30 -2.91 -0.02 -2.21 16 51 H 0.09 -0.19 6.32 -2.39 -0.02 -0.20 16 52 H 0.07 -0.21 8.14 -2.39 -0.02 -0.23 16 53 H 0.17 -2.10 8.05 -2.91 -0.02 -2.12 16 54 H 0.16 -1.23 6.30 -2.91 -0.02 -1.25 16 Total: 0.00 -37.18 447.33 1.69 -35.49 By element: Atomic # 1 Polarization: -23.84 SS G_CDS: -0.44 Total: -24.27 kcal Atomic # 6 Polarization: 6.00 SS G_CDS: 5.70 Total: 11.70 kcal Atomic # 7 Polarization: 4.27 SS G_CDS: -2.32 Total: 1.95 kcal Atomic # 8 Polarization: -18.07 SS G_CDS: -4.07 Total: -22.14 kcal Atomic # 9 Polarization: -1.92 SS G_CDS: 0.77 Total: -1.15 kcal Atomic # 14 Polarization: -3.61 SS G_CDS: 2.05 Total: -1.56 kcal Total: -37.18 1.69 -35.49 kcal The number of atoms in the molecule is 54 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_9824364_60476.mol2 54 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -91.707 kcal (2) G-P(sol) polarization free energy of solvation -37.178 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -128.884 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.692 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.485 kcal (6) G-S(sol) free energy of system = (1) + (5) -127.192 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.45 seconds