Wall clock time and date at job start Tue Mar 9 2021 13:00:50 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42897 * 1 3 3 C 1.35953 * 117.00599 * 2 1 4 4 C 1.38902 * 120.06652 * 179.97438 * 3 2 1 5 5 F 1.35101 * 120.04992 * 359.97438 * 4 3 2 6 6 C 1.38339 * 119.90666 * 179.97438 * 4 3 2 7 7 C 1.38254 * 120.02822 * 0.02562 * 6 4 3 8 8 C 1.50700 * 119.93770 * 179.97438 * 7 6 4 9 9 H 1.09000 * 112.90619 * 348.75186 * 8 7 6 10 10 C 1.53777 * 113.61502 * 120.00204 * 8 7 6 11 11 C 1.53775 * 87.17193 * 140.02469 * 10 8 7 12 12 H 1.09003 * 113.61320 * 219.97966 * 11 10 8 13 13 N 1.46497 * 113.61594 * 89.07845 * 11 10 8 14 14 C 1.34770 * 120.00176 * 155.00035 * 13 11 10 15 15 O 1.21703 * 120.00641 * 359.97438 * 14 13 11 16 16 C 1.46585 * 120.00354 * 179.97438 * 14 13 11 17 17 C 1.36644 * 125.46369 * 179.71703 * 16 14 13 18 18 C 1.37476 * 113.29875 * 179.80020 * 17 16 14 19 19 C 1.50701 * 122.45171 * 180.24281 * 18 17 16 20 20 C 1.33820 * 115.09922 * 0.49616 * 18 17 16 21 21 C 1.50697 * 124.52200 * 179.70764 * 20 18 17 22 22 O 1.42903 * 109.47420 * 113.32376 * 21 20 18 23 23 Si 1.86300 * 109.46901 * 233.32329 * 21 20 18 24 24 S 1.70618 * 110.95316 * 359.72423 * 20 18 17 25 25 C 1.53780 * 87.08253 * 334.52329 * 11 10 8 26 26 C 1.38267 * 120.12508 * 0.23652 * 7 6 4 27 27 C 1.38183 * 120.09567 * 359.48677 * 26 7 6 28 28 H 1.08999 * 109.47503 * 180.02562 * 1 2 3 29 29 H 1.09000 * 109.47272 * 300.00659 * 1 2 3 30 30 H 1.09006 * 109.46892 * 60.00217 * 1 2 3 31 31 H 1.07993 * 119.98217 * 180.02562 * 6 4 3 32 32 H 1.09003 * 113.61115 * 25.43191 * 10 8 7 33 33 H 1.08999 * 113.61387 * 254.61706 * 10 8 7 34 34 H 0.97004 * 119.99633 * 334.99438 * 13 11 10 35 35 H 1.07996 * 123.35046 * 0.02562 * 17 16 14 36 36 H 1.08995 * 109.47109 * 265.16697 * 19 18 17 37 37 H 1.09000 * 109.46720 * 25.16591 * 19 18 17 38 38 H 1.09004 * 109.46742 * 145.16282 * 19 18 17 39 39 H 1.09004 * 109.47249 * 353.32312 * 21 20 18 40 40 H 0.96697 * 113.99892 * 59.99504 * 22 21 20 41 41 H 1.48500 * 110.00054 * 180.02562 * 23 21 20 42 42 H 1.48493 * 110.00071 * 301.31655 * 23 21 20 43 43 H 1.09004 * 113.60940 * 139.97781 * 25 11 10 44 44 H 1.08996 * 113.61754 * 270.88373 * 25 11 10 45 45 H 1.07997 * 119.94985 * 179.71973 * 26 7 6 46 46 H 1.07998 * 120.01434 * 180.23018 * 27 26 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0463 1.2113 0.0000 4 6 3.4334 1.2855 0.0005 5 9 4.1713 0.1538 0.0016 6 6 4.0581 2.5197 0.0000 7 6 3.3026 3.6776 -0.0005 8 6 3.9852 5.0211 -0.0005 9 1 5.0553 4.9533 0.1958 10 6 3.6367 5.8892 -1.2211 11 6 3.5904 7.0883 -0.2594 12 1 2.7780 7.7843 -0.4682 13 7 4.8837 7.7554 -0.0906 14 6 4.9306 9.0509 0.2778 15 8 3.8987 9.6669 0.4698 16 6 6.2247 9.7184 0.4473 17 6 6.4019 11.0236 0.8106 18 6 7.7244 11.3885 0.8995 19 6 8.1551 12.7790 1.2898 20 6 8.6012 10.4202 0.6090 21 6 10.0985 10.5888 0.6325 22 8 10.6511 9.7934 1.6832 23 14 10.8105 10.0423 -1.0001 24 16 7.7975 8.9696 0.2082 25 6 3.2666 6.0806 0.8563 26 6 1.9218 3.6052 0.0044 27 6 1.2924 2.3751 -0.0008 28 1 -0.3634 -1.0276 0.0005 29 1 -0.3634 0.5139 0.8899 30 1 -0.3633 0.5138 -0.8901 31 1 5.1364 2.5788 0.0000 32 1 2.6711 5.6489 -1.6663 33 1 4.4386 5.9502 -1.9568 34 1 5.7062 7.2646 -0.2439 35 1 5.5845 11.7002 1.0117 36 1 8.3309 13.3704 0.3913 37 1 7.3724 13.2478 1.8861 38 1 9.0735 12.7241 1.8743 39 1 10.3435 11.6371 0.8031 40 1 10.4718 8.8472 1.5962 41 1 12.2867 10.2030 -0.9897 42 1 10.4564 8.6237 -1.2593 43 1 3.7708 6.2956 1.7985 44 1 2.2000 5.8928 0.9790 45 1 1.3344 4.5115 0.0085 46 1 0.2138 2.3201 -0.0007 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_9824364_6739946.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:00:50 Heat of formation + Delta-G solvation = -60.304374 kcal Electronic energy + Delta-G solvation = -30781.282595 eV Core-core repulsion = 26259.049068 eV Total energy + Delta-G solvation = -4522.233527 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 378.113 amu Computer time = 1.01 seconds Orbital eigenvalues (eV) -49.88845 -41.72325 -40.95451 -40.11532 -39.45374 -37.99964 -37.64021 -34.60909 -32.48643 -31.85331 -31.16821 -29.82466 -28.46383 -27.09483 -26.69568 -25.64368 -24.41529 -23.80935 -22.64991 -22.00882 -20.50938 -20.05201 -19.59594 -19.35399 -18.10832 -17.89174 -17.58030 -17.47264 -17.20427 -17.04508 -16.45365 -16.12262 -16.10607 -16.09115 -15.83988 -15.67918 -15.47881 -15.24549 -14.96702 -14.75968 -14.39209 -14.10374 -14.03893 -13.74223 -13.65982 -13.45849 -13.40867 -13.15722 -13.11671 -13.01315 -12.96677 -12.49367 -12.36793 -12.30088 -12.21945 -11.85266 -11.78598 -11.50601 -11.33380 -11.27103 -10.94415 -10.26577 -9.97972 -9.72373 -9.44231 -9.13676 -4.99578 -0.70136 0.07251 0.15398 0.27401 0.68298 1.09156 1.26112 1.51700 1.88670 1.92462 2.03624 2.17023 2.44996 3.15814 3.26127 3.42456 3.50966 3.56834 3.62553 3.71744 3.76156 3.92774 4.02008 4.09149 4.13933 4.20730 4.23737 4.32052 4.33049 4.45111 4.50097 4.52458 4.59992 4.68166 4.74142 4.78111 4.83702 4.85592 4.88582 4.89110 5.00925 5.01825 5.05264 5.12653 5.16037 5.31280 5.40313 5.41684 5.59102 5.62575 6.24507 6.29266 6.31359 6.98059 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.017 3.983 2 O -0.340 6.340 3 C 0.075 3.925 4 C 0.035 3.965 5 F -0.152 7.152 6 C -0.113 4.113 7 C -0.078 4.078 8 C -0.064 4.064 9 H 0.109 0.891 10 C -0.124 4.124 11 C 0.113 3.887 12 H 0.096 0.904 13 N -0.699 5.699 14 C 0.594 3.406 15 O -0.566 6.566 16 C -0.279 4.279 17 C -0.052 4.052 18 C -0.100 4.100 19 C -0.102 4.102 20 C -0.230 4.230 21 C -0.049 4.049 22 O -0.540 6.540 23 Si 0.740 3.260 24 S 0.223 5.777 25 C -0.142 4.142 26 C -0.081 4.081 27 C -0.177 4.177 28 H 0.114 0.886 29 H 0.070 0.930 30 H 0.071 0.929 31 H 0.154 0.846 32 H 0.111 0.889 33 H 0.087 0.913 34 H 0.409 0.591 35 H 0.152 0.848 36 H 0.093 0.907 37 H 0.073 0.927 38 H 0.074 0.926 39 H 0.141 0.859 40 H 0.384 0.616 41 H -0.281 1.281 42 H -0.257 1.257 43 H 0.067 0.933 44 H 0.107 0.893 45 H 0.159 0.841 46 H 0.160 0.840 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.696 2.168 -3.168 3.902 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.077 4.077 2 O -0.254 6.254 3 C 0.029 3.971 4 C 0.015 3.985 5 F -0.131 7.131 6 C -0.131 4.131 7 C -0.078 4.078 8 C -0.083 4.083 9 H 0.127 0.873 10 C -0.162 4.162 11 C 0.008 3.992 12 H 0.114 0.886 13 N -0.349 5.349 14 C 0.381 3.619 15 O -0.447 6.447 16 C -0.399 4.399 17 C -0.086 4.086 18 C -0.112 4.112 19 C -0.161 4.161 20 C -0.350 4.350 21 C -0.160 4.160 22 O -0.348 6.348 23 Si 0.641 3.359 24 S 0.493 5.507 25 C -0.180 4.180 26 C -0.099 4.099 27 C -0.195 4.195 28 H 0.132 0.868 29 H 0.089 0.911 30 H 0.090 0.910 31 H 0.171 0.829 32 H 0.129 0.871 33 H 0.106 0.894 34 H 0.246 0.754 35 H 0.169 0.831 36 H 0.111 0.889 37 H 0.092 0.908 38 H 0.093 0.907 39 H 0.158 0.842 40 H 0.233 0.767 41 H -0.207 1.207 42 H -0.182 1.182 43 H 0.086 0.914 44 H 0.126 0.874 45 H 0.176 0.824 46 H 0.178 0.822 Dipole moment (debyes) X Y Z Total from point charges -0.108 0.863 -3.674 3.776 hybrid contribution -0.277 -0.026 1.415 1.442 sum -0.385 0.836 -2.259 2.439 Atomic orbital electron populations 1.23405 0.75758 1.05743 1.02746 1.86108 1.24062 1.26467 1.88788 1.19326 0.90967 0.86520 1.00326 1.17430 0.86645 0.83245 1.11181 1.91454 1.76843 1.50149 1.94646 1.21102 1.01806 0.89305 1.00931 1.19564 0.93451 0.94001 1.00803 1.21610 1.00129 0.88987 0.97536 0.87254 1.23424 1.04620 0.92176 0.95971 1.21953 0.85586 0.93860 0.97826 0.88615 1.45468 1.09897 1.10254 1.69307 1.17117 0.87042 0.81811 0.75929 1.90833 1.35360 1.65963 1.52505 1.24472 0.97055 1.00035 1.18362 1.20830 0.97587 0.94127 0.96071 1.18830 0.91133 0.98933 1.02336 1.20688 1.02356 0.90286 1.02760 1.24544 1.01667 0.99326 1.09458 1.24805 0.87465 1.01668 1.02069 1.86655 1.77716 1.23066 1.47386 0.93902 0.79225 0.83307 0.79491 1.82672 0.93775 1.11029 1.63230 1.23651 1.02413 0.94331 0.97598 1.21216 0.94064 0.97920 0.96662 1.21432 1.01477 0.90792 1.05849 0.86756 0.91141 0.91011 0.82880 0.87105 0.89426 0.75426 0.83051 0.88872 0.90848 0.90740 0.84187 0.76656 1.20696 1.18194 0.91444 0.87436 0.82396 0.82211 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.06 9.81 113.37 1.11 1.06 16 2 O -0.34 -2.19 10.36 -93.03 -0.96 -3.15 16 3 C 0.07 0.38 6.69 22.53 0.15 0.54 16 4 C 0.03 0.24 7.31 22.45 0.16 0.40 16 5 F -0.15 -1.76 17.11 44.97 0.77 -0.99 16 6 C -0.11 -0.12 9.68 22.30 0.22 0.10 16 7 C -0.08 0.21 5.29 -19.85 -0.11 0.11 16 8 C -0.06 0.40 3.86 -10.92 -0.04 0.36 16 9 H 0.11 -0.87 8.09 -2.39 -0.02 -0.89 16 10 C -0.12 0.89 7.28 31.12 0.23 1.12 16 11 C 0.11 -0.34 4.32 45.52 0.20 -0.14 16 12 H 0.10 0.05 7.46 -2.39 -0.02 0.03 16 13 N -0.70 1.09 5.26 -444.11 -2.34 -1.24 16 14 C 0.59 2.96 7.78 86.42 0.67 3.64 16 15 O -0.57 -7.28 16.44 -4.36 -0.07 -7.35 16 16 C -0.28 -0.63 6.45 24.08 0.16 -0.48 16 17 C -0.05 -0.12 9.78 21.72 0.21 0.09 16 18 C -0.10 0.06 5.78 -21.05 -0.12 -0.07 16 19 C -0.10 0.44 9.48 71.24 0.68 1.11 16 20 C -0.23 0.42 4.83 24.68 0.12 0.54 16 21 C -0.05 0.15 2.77 71.23 0.20 0.35 16 22 O -0.54 -0.05 12.88 -148.98 -1.92 -1.97 16 23 Si 0.74 -3.23 32.13 68.60 2.20 -1.02 16 24 S 0.22 -0.67 20.83 -56.49 -1.18 -1.85 16 25 C -0.14 0.64 7.26 31.21 0.23 0.87 16 26 C -0.08 0.30 8.62 22.26 0.19 0.49 16 27 C -0.18 0.21 9.04 22.36 0.20 0.42 16 28 H 0.11 -0.65 8.14 -2.39 -0.02 -0.67 16 29 H 0.07 -0.41 7.66 -2.39 -0.02 -0.43 16 30 H 0.07 -0.44 7.66 -2.38 -0.02 -0.45 16 31 H 0.15 -0.38 8.05 -2.91 -0.02 -0.40 16 32 H 0.11 -0.94 7.73 -2.39 -0.02 -0.96 16 33 H 0.09 -0.72 8.14 -2.39 -0.02 -0.74 16 34 H 0.41 -2.52 7.81 -92.71 -0.72 -3.25 16 35 H 0.15 0.42 8.06 -2.91 -0.02 0.39 16 36 H 0.09 -0.68 8.14 -2.39 -0.02 -0.70 16 37 H 0.07 -0.31 8.10 -2.39 -0.02 -0.33 16 38 H 0.07 -0.33 7.00 -2.39 -0.02 -0.35 16 39 H 0.14 -0.72 6.25 -2.39 -0.01 -0.74 16 40 H 0.38 -2.11 8.70 -74.06 -0.64 -2.75 16 41 H -0.28 -0.68 7.11 99.48 0.71 0.02 16 42 H -0.26 0.56 7.11 99.48 0.71 1.26 16 43 H 0.07 -0.14 8.14 -2.38 -0.02 -0.15 16 44 H 0.11 -0.69 6.30 -2.39 -0.02 -0.70 16 45 H 0.16 -1.38 6.64 -2.91 -0.02 -1.40 16 46 H 0.16 -0.99 6.30 -2.91 -0.02 -1.01 16 Total: 0.00 -22.01 399.66 0.68 -21.32 By element: Atomic # 1 Polarization: -13.97 SS G_CDS: -0.28 Total: -14.24 kcal Atomic # 6 Polarization: 6.05 SS G_CDS: 4.45 Total: 10.50 kcal Atomic # 7 Polarization: 1.09 SS G_CDS: -2.34 Total: -1.24 kcal Atomic # 8 Polarization: -9.52 SS G_CDS: -2.95 Total: -12.47 kcal Atomic # 9 Polarization: -1.76 SS G_CDS: 0.77 Total: -0.99 kcal Atomic # 14 Polarization: -3.23 SS G_CDS: 2.20 Total: -1.02 kcal Atomic # 16 Polarization: -0.67 SS G_CDS: -1.18 Total: -1.85 kcal Total: -22.01 0.68 -21.32 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_9824364_6739946.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -38.981 kcal (2) G-P(sol) polarization free energy of solvation -22.005 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -60.986 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.682 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.323 kcal (6) G-S(sol) free energy of system = (1) + (5) -60.304 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.01 seconds