Wall clock time and date at job start Tue Mar 9 2021 13:00:53 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42903 * 1 3 3 C 1.35952 * 116.99992 * 2 1 4 4 C 1.38896 * 120.06568 * 180.02562 * 3 2 1 5 5 F 1.35107 * 120.04929 * 0.02562 * 4 3 2 6 6 C 1.38331 * 119.90887 * 179.97438 * 4 3 2 7 7 C 1.38255 * 120.03092 * 0.02562 * 6 4 3 8 8 C 1.50692 * 119.94102 * 179.97438 * 7 6 4 9 9 H 1.09004 * 112.90785 * 11.24923 * 8 7 6 10 10 C 1.53784 * 113.61665 * 142.50316 * 8 7 6 11 11 C 1.53778 * 87.08081 * 139.98095 * 10 8 7 12 12 H 1.08999 * 113.61526 * 220.02035 * 11 10 8 13 13 N 1.46498 * 113.61736 * 89.11728 * 11 10 8 14 14 C 1.34778 * 120.00186 * 107.49948 * 13 11 10 15 15 O 1.21634 * 119.99910 * 0.02562 * 14 13 11 16 16 C 1.47189 * 120.00131 * 180.02562 * 14 13 11 17 17 C 1.36010 * 123.46182 * 0.02778 * 16 14 13 18 18 S 1.70445 * 110.81904 * 179.97438 * 17 16 14 19 19 C 1.75507 * 92.44450 * 359.97438 * 18 17 16 20 20 C 1.50691 * 124.71233 * 180.02562 * 19 18 17 21 21 O 1.42902 * 109.47519 * 119.97431 * 20 19 18 22 22 Si 1.86299 * 109.47337 * 359.97438 * 20 19 18 23 23 C 1.32774 * 110.57424 * 359.73753 * 19 18 17 24 24 C 1.53778 * 87.08449 * 334.56700 * 11 10 8 25 25 C 1.38263 * 120.12119 * 0.23310 * 7 6 4 26 26 C 1.38186 * 120.09791 * 359.49658 * 25 7 6 27 27 H 1.08996 * 109.47502 * 59.99623 * 1 2 3 28 28 H 1.09003 * 109.46998 * 179.97438 * 1 2 3 29 29 H 1.08995 * 109.47078 * 299.99080 * 1 2 3 30 30 H 1.08001 * 119.98814 * 180.02562 * 6 4 3 31 31 H 1.08993 * 113.61313 * 254.52692 * 10 8 7 32 32 H 1.09000 * 113.61578 * 25.43424 * 10 8 7 33 33 H 0.97004 * 120.00105 * 287.50659 * 13 11 10 34 34 H 1.08001 * 124.58541 * 0.02562 * 17 16 14 35 35 H 1.09007 * 109.47274 * 239.97963 * 20 19 18 36 36 H 0.96699 * 114.00530 * 179.97438 * 21 20 19 37 37 H 1.48500 * 109.99675 * 60.00048 * 22 20 19 38 38 H 1.48493 * 110.00330 * 181.31994 * 22 20 19 39 39 H 1.08001 * 123.45782 * 180.24489 * 23 19 18 40 40 H 1.08998 * 113.61879 * 270.88747 * 24 11 10 41 41 H 1.08997 * 113.69304 * 139.98833 * 24 11 10 42 42 H 1.08008 * 119.95396 * 179.71883 * 25 7 6 43 43 H 1.07998 * 120.01827 * 180.27652 * 26 25 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0462 1.2113 0.0000 4 6 3.4332 1.2856 -0.0005 5 9 4.1713 0.1540 -0.0016 6 6 4.0578 2.5199 -0.0011 7 6 3.3023 3.6777 -0.0005 8 6 3.9849 5.0212 -0.0005 9 1 5.0549 4.9535 -0.1968 10 6 3.2669 6.0770 -0.8577 11 6 3.5893 7.0867 0.2564 12 1 2.7763 7.7825 0.4638 13 7 4.8821 7.7547 0.0869 14 6 4.9282 9.0497 -0.2836 15 8 3.8963 9.6640 -0.4768 16 6 6.2271 9.7206 -0.4543 17 6 7.4223 9.1020 -0.2577 18 16 8.7146 10.1757 -0.5446 19 6 7.6284 11.4959 -0.9414 20 6 8.0701 12.8825 -1.3327 21 8 7.5843 13.1855 -2.6420 22 14 9.9311 12.9665 -1.3261 23 6 6.3635 11.1015 -0.8550 24 6 3.6363 5.8893 1.2201 25 6 1.9216 3.6053 0.0054 26 6 1.2922 2.3751 0.0003 27 1 -0.3634 0.5139 -0.8899 28 1 -0.3633 -1.0277 -0.0005 29 1 -0.3633 0.5137 0.8900 30 1 5.1362 2.5791 -0.0019 31 1 3.7712 6.2908 -1.8000 32 1 2.2004 5.8881 -0.9805 33 1 5.7051 7.2649 0.2413 34 1 7.5369 8.0699 0.0392 35 1 7.6713 13.6053 -0.6208 36 1 7.8311 14.0650 -2.9594 37 1 10.4872 11.9857 -2.2925 38 1 10.3790 14.3375 -1.6793 39 1 5.5229 11.7480 -1.0595 40 1 2.6708 5.6490 1.6653 41 1 4.4382 5.9503 1.9557 42 1 1.3340 4.5115 0.0104 43 1 0.2136 2.3200 0.0004 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_9824364_6894386.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:00:53 Heat of formation + Delta-G solvation = -55.460324 kcal Electronic energy + Delta-G solvation = -28592.959499 eV Core-core repulsion = 24226.473645 eV Total energy + Delta-G solvation = -4366.485854 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 364.098 amu Computer time = 0.88 seconds Orbital eigenvalues (eV) -49.87337 -41.72279 -40.95693 -39.92732 -38.72794 -37.93621 -37.21680 -34.56245 -32.03276 -31.80961 -31.02089 -28.41977 -26.96569 -26.66866 -26.44397 -25.14798 -23.82997 -22.65461 -22.04119 -20.50094 -20.32025 -19.40751 -18.75916 -18.44741 -18.23882 -17.96069 -17.55893 -17.19461 -16.88604 -16.35444 -16.25049 -16.09481 -15.95899 -15.83724 -15.68533 -15.36542 -15.16891 -14.67896 -14.19288 -14.16191 -13.89724 -13.83931 -13.70567 -13.68614 -13.58206 -13.35492 -13.07533 -12.97516 -12.74149 -12.40779 -12.34436 -12.20045 -12.04906 -11.81124 -11.47265 -11.26586 -11.04532 -10.64060 -10.18221 -9.96734 -9.91900 -9.43744 -9.12435 -5.06208 -0.32939 0.08420 0.16715 0.37560 0.70541 0.82464 1.21789 1.58051 1.88609 2.06366 2.17843 2.25712 2.46381 3.17097 3.30133 3.46657 3.58834 3.64136 3.72056 3.77363 3.90781 3.95710 4.02352 4.04589 4.16675 4.22234 4.28172 4.32811 4.33181 4.42522 4.51467 4.64252 4.69039 4.72941 4.79735 4.84447 4.89376 4.90875 5.01062 5.03870 5.07691 5.16360 5.17411 5.18886 5.45803 5.63268 5.64511 6.25142 6.46965 6.52587 7.15606 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.017 3.983 2 O -0.340 6.340 3 C 0.074 3.926 4 C 0.035 3.965 5 F -0.152 7.152 6 C -0.111 4.111 7 C -0.078 4.078 8 C -0.061 4.061 9 H 0.114 0.886 10 C -0.143 4.143 11 C 0.113 3.887 12 H 0.088 0.912 13 N -0.693 5.693 14 C 0.579 3.421 15 O -0.582 6.582 16 C -0.183 4.183 17 C -0.189 4.189 18 S 0.249 5.751 19 C -0.213 4.213 20 C -0.050 4.050 21 O -0.557 6.557 22 Si 0.726 3.274 23 C -0.078 4.078 24 C -0.123 4.123 25 C -0.082 4.082 26 C -0.178 4.178 27 H 0.069 0.931 28 H 0.114 0.886 29 H 0.071 0.929 30 H 0.156 0.844 31 H 0.066 0.934 32 H 0.102 0.898 33 H 0.415 0.585 34 H 0.208 0.792 35 H 0.102 0.898 36 H 0.398 0.602 37 H -0.271 1.271 38 H -0.257 1.257 39 H 0.132 0.868 40 H 0.106 0.894 41 H 0.091 0.909 42 H 0.156 0.844 43 H 0.159 0.841 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.781 1.154 3.988 4.996 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.076 4.076 2 O -0.254 6.254 3 C 0.028 3.972 4 C 0.015 3.985 5 F -0.131 7.131 6 C -0.130 4.130 7 C -0.079 4.079 8 C -0.079 4.079 9 H 0.133 0.867 10 C -0.182 4.182 11 C 0.008 3.992 12 H 0.106 0.894 13 N -0.344 5.344 14 C 0.367 3.633 15 O -0.464 6.464 16 C -0.201 4.201 17 C -0.328 4.328 18 S 0.515 5.485 19 C -0.329 4.329 20 C -0.160 4.160 21 O -0.368 6.368 22 Si 0.626 3.374 23 C -0.108 4.108 24 C -0.160 4.160 25 C -0.100 4.100 26 C -0.197 4.197 27 H 0.088 0.912 28 H 0.133 0.867 29 H 0.090 0.910 30 H 0.174 0.826 31 H 0.084 0.916 32 H 0.121 0.879 33 H 0.253 0.747 34 H 0.225 0.775 35 H 0.120 0.880 36 H 0.249 0.751 37 H -0.197 1.197 38 H -0.182 1.182 39 H 0.150 0.850 40 H 0.124 0.876 41 H 0.109 0.891 42 H 0.174 0.826 43 H 0.177 0.823 Dipole moment (debyes) X Y Z Total from point charges 4.202 0.759 3.516 5.531 hybrid contribution -2.148 0.316 -1.121 2.444 sum 2.054 1.075 2.395 3.333 Atomic orbital electron populations 1.23399 0.75797 1.05732 1.02714 1.86108 1.24030 1.26473 1.88806 1.19325 0.91024 0.86464 1.00379 1.17432 0.86591 0.83298 1.11148 1.91456 1.76811 1.50150 1.94644 1.21115 1.01897 0.89183 1.00790 1.19594 0.93378 0.94178 1.00705 1.21563 1.00300 0.88715 0.97335 0.86744 1.23599 1.02200 0.94685 0.97711 1.21896 0.86010 0.93669 0.97662 0.89415 1.45370 1.09770 1.10246 1.69057 1.17844 0.87933 0.81901 0.75658 1.90787 1.36542 1.66300 1.52732 1.20074 0.93150 0.95051 1.11805 1.26191 0.96341 1.06598 1.03633 1.82925 1.06306 0.97672 1.61572 1.23832 0.97000 1.00559 1.11523 1.24396 1.11749 0.93175 0.86724 1.86568 1.77573 1.40669 1.31957 0.94541 0.71894 0.81458 0.89481 1.20983 0.97025 0.94237 0.98521 1.23405 1.04505 0.92140 0.95991 1.21210 0.94209 0.97827 0.96768 1.21422 1.01436 0.90849 1.05955 0.91194 0.86740 0.91040 0.82609 0.91553 0.87932 0.74699 0.77491 0.88009 0.75064 1.19678 1.18187 0.84996 0.87563 0.89088 0.82644 0.82347 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.05 9.81 113.37 1.11 1.06 16 2 O -0.34 -2.25 10.36 -93.01 -0.96 -3.22 16 3 C 0.07 0.39 6.69 22.53 0.15 0.55 16 4 C 0.03 0.24 7.31 22.45 0.16 0.40 16 5 F -0.15 -1.73 17.11 44.97 0.77 -0.96 16 6 C -0.11 -0.08 9.68 22.30 0.22 0.14 16 7 C -0.08 0.21 5.29 -19.86 -0.11 0.11 16 8 C -0.06 0.40 3.85 -11.01 -0.04 0.36 16 9 H 0.11 -1.06 8.09 -2.39 -0.02 -1.08 16 10 C -0.14 0.56 7.25 31.12 0.23 0.79 16 11 C 0.11 -0.29 4.32 45.52 0.20 -0.09 16 12 H 0.09 0.19 7.46 -2.39 -0.02 0.17 16 13 N -0.69 1.49 5.23 -443.53 -2.32 -0.83 16 14 C 0.58 3.57 7.79 86.59 0.67 4.24 16 15 O -0.58 -9.09 16.40 -4.14 -0.07 -9.16 16 16 C -0.18 -0.61 5.98 -19.87 -0.12 -0.73 16 17 C -0.19 0.78 10.38 67.30 0.70 1.48 16 18 S 0.25 -0.91 20.18 -56.49 -1.14 -2.05 16 19 C -0.21 -0.44 5.72 24.51 0.14 -0.30 16 20 C -0.05 0.03 2.94 71.23 0.21 0.24 16 21 O -0.56 -1.51 12.82 -148.98 -1.91 -3.42 16 22 Si 0.73 -2.54 30.91 68.60 2.12 -0.42 16 23 C -0.08 -0.49 9.91 22.67 0.22 -0.27 16 24 C -0.12 0.89 7.29 31.12 0.23 1.12 16 25 C -0.08 0.26 8.59 22.26 0.19 0.46 16 26 C -0.18 0.13 9.04 22.36 0.20 0.34 16 27 H 0.07 -0.38 7.66 -2.39 -0.02 -0.40 16 28 H 0.11 -0.63 8.14 -2.39 -0.02 -0.65 16 29 H 0.07 -0.41 7.66 -2.39 -0.02 -0.43 16 30 H 0.16 -0.51 8.05 -2.91 -0.02 -0.53 16 31 H 0.07 -0.08 8.14 -2.39 -0.02 -0.10 16 32 H 0.10 -0.52 6.32 -2.39 -0.02 -0.54 16 33 H 0.42 -3.74 7.20 -92.71 -0.67 -4.41 16 34 H 0.21 -2.58 7.01 -2.91 -0.02 -2.60 16 35 H 0.10 -0.43 7.96 -2.38 -0.02 -0.45 16 36 H 0.40 -2.36 8.74 -74.06 -0.65 -3.01 16 37 H -0.27 -0.66 7.11 99.48 0.71 0.05 16 38 H -0.26 0.10 7.11 99.48 0.71 0.80 16 39 H 0.13 1.31 8.06 -2.91 -0.02 1.28 16 40 H 0.11 -0.85 7.71 -2.39 -0.02 -0.86 16 41 H 0.09 -0.82 8.14 -2.39 -0.02 -0.84 16 42 H 0.16 -1.21 6.67 -2.91 -0.02 -1.23 16 43 H 0.16 -0.88 6.30 -2.91 -0.02 -0.90 16 Total: 0.00 -26.56 378.40 0.66 -25.89 By element: Atomic # 1 Polarization: -15.53 SS G_CDS: -0.19 Total: -15.72 kcal Atomic # 6 Polarization: 5.52 SS G_CDS: 4.37 Total: 9.89 kcal Atomic # 7 Polarization: 1.49 SS G_CDS: -2.32 Total: -0.83 kcal Atomic # 8 Polarization: -12.85 SS G_CDS: -2.94 Total: -15.79 kcal Atomic # 9 Polarization: -1.73 SS G_CDS: 0.77 Total: -0.96 kcal Atomic # 14 Polarization: -2.54 SS G_CDS: 2.12 Total: -0.42 kcal Atomic # 16 Polarization: -0.91 SS G_CDS: -1.14 Total: -2.05 kcal Total: -26.56 0.66 -25.89 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_9824364_6894386.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -29.569 kcal (2) G-P(sol) polarization free energy of solvation -26.555 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -56.124 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.664 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.891 kcal (6) G-S(sol) free energy of system = (1) + (5) -55.460 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.88 seconds