Wall clock time and date at job start Tue Mar 9 2021 13:01:06 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42899 * 1 3 3 C 1.35960 * 117.00043 * 2 1 4 4 C 1.38899 * 120.06202 * 179.97438 * 3 2 1 5 5 F 1.35099 * 120.04995 * 0.05097 * 4 3 2 6 6 C 1.38335 * 119.90492 * 180.02562 * 4 3 2 7 7 C 1.38253 * 120.02787 * 359.97438 * 6 4 3 8 8 C 1.50699 * 119.93980 * 179.97438 * 7 6 4 9 9 H 1.09006 * 112.84563 * 348.80257 * 8 7 6 10 10 C 1.53778 * 113.61878 * 120.00158 * 8 7 6 11 11 C 1.53784 * 87.08287 * 139.98350 * 10 8 7 12 12 H 1.08996 * 113.60915 * 220.01936 * 11 10 8 13 13 N 1.46500 * 113.61400 * 89.20177 * 11 10 8 14 14 C 1.34773 * 119.99927 * 155.00129 * 13 11 10 15 15 O 1.21287 * 119.99906 * 359.97438 * 14 13 11 16 16 C 1.50698 * 119.99957 * 179.97438 * 14 13 11 17 17 N 1.46503 * 109.47213 * 179.97438 * 16 14 13 18 18 C 1.36831 * 125.06598 * 265.02767 * 17 16 14 19 19 C 1.34237 * 109.93833 * 179.97438 * 18 17 16 20 20 C 1.50699 * 126.49844 * 180.02562 * 19 18 17 21 21 O 1.42904 * 109.46972 * 254.97625 * 20 19 18 22 22 Si 1.86296 * 109.47291 * 14.97544 * 20 19 18 23 23 C 1.46493 * 106.99979 * 0.02562 * 19 18 17 24 24 C 1.39592 * 134.03518 * 179.97438 * 23 19 18 25 25 C 1.36664 * 119.75672 * 179.24290 * 24 23 19 26 26 C 1.38787 * 120.53340 * 0.65965 * 25 24 23 27 27 C 1.37794 * 120.66304 * 359.57712 * 26 25 24 28 28 C 1.37695 * 125.06053 * 84.72146 * 17 16 14 29 29 C 1.53778 * 87.08070 * 334.56875 * 11 10 8 30 30 C 1.38266 * 120.12968 * 0.02562 * 7 6 4 31 31 C 1.38184 * 120.09215 * 359.97438 * 30 7 6 32 32 H 1.09004 * 109.46836 * 59.99970 * 1 2 3 33 33 H 1.09001 * 109.47419 * 179.97438 * 1 2 3 34 34 H 1.09001 * 109.47541 * 299.99907 * 1 2 3 35 35 H 1.08003 * 119.98652 * 179.72933 * 6 4 3 36 36 H 1.09007 * 113.61431 * 254.53070 * 10 8 7 37 37 H 1.08995 * 113.61433 * 25.34666 * 10 8 7 38 38 H 0.97004 * 120.00016 * 334.99538 * 13 11 10 39 39 H 1.08992 * 109.47825 * 300.00259 * 16 14 13 40 40 H 1.09005 * 109.47030 * 60.00355 * 16 14 13 41 41 H 1.08004 * 125.02993 * 359.97438 * 18 17 16 42 42 H 1.09000 * 109.47059 * 134.98073 * 20 19 18 43 43 H 0.96703 * 113.99663 * 60.00447 * 21 20 19 44 44 H 1.48500 * 109.99853 * 58.68365 * 22 20 19 45 45 H 1.48498 * 110.00090 * 179.97438 * 22 20 19 46 46 H 1.07998 * 120.11960 * 359.97438 * 24 23 19 47 47 H 1.08001 * 119.73080 * 180.21504 * 25 24 23 48 48 H 1.08002 * 119.66901 * 179.60767 * 26 25 24 49 49 H 1.07995 * 120.10616 * 180.02562 * 27 26 25 50 50 H 1.09001 * 113.61551 * 270.88897 * 29 11 10 51 51 H 1.08997 * 113.61674 * 139.98292 * 29 11 10 52 52 H 1.07994 * 119.95202 * 179.97438 * 30 7 6 53 53 H 1.07993 * 120.01596 * 180.02562 * 31 30 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0462 1.2114 0.0000 4 6 3.4333 1.2856 0.0005 5 9 4.1713 0.1540 0.0000 6 6 4.0579 2.5199 0.0011 7 6 3.3023 3.6777 0.0005 8 6 3.9849 5.0212 0.0017 9 1 5.0549 4.9522 0.1980 10 6 3.6372 5.8900 -1.2186 11 6 3.5896 7.0870 -0.2543 12 1 2.7767 7.7827 -0.4620 13 7 4.8819 7.7560 -0.0851 14 6 4.9269 9.0508 0.2861 15 8 3.8974 9.6623 0.4795 16 6 6.2562 9.7388 0.4608 17 7 6.0368 11.1302 0.8635 18 6 5.9967 12.1988 0.0098 19 6 5.7778 13.3287 0.7007 20 6 5.6650 14.7196 0.1317 21 8 6.8612 15.4484 0.4148 22 14 5.4212 14.6183 -1.7124 23 6 5.6693 12.9533 2.1125 24 6 5.4494 13.6666 3.2921 25 6 5.3855 13.0022 4.4847 26 6 5.5511 11.6251 4.5344 27 6 5.7740 10.9021 3.3827 28 6 5.8342 11.5567 2.1570 29 6 3.2664 6.0766 0.8590 30 6 1.9216 3.6053 0.0000 31 6 1.2922 2.3751 -0.0005 32 1 -0.3633 0.5139 -0.8900 33 1 -0.3634 -1.0277 -0.0005 34 1 -0.3634 0.5138 0.8900 35 1 5.1363 2.5791 0.0059 36 1 4.4403 5.9526 -1.9531 37 1 2.6728 5.6490 -1.6656 38 1 5.7052 7.2669 -0.2400 39 1 6.8334 9.2245 1.2290 40 1 6.8038 9.7158 -0.4815 41 1 6.1226 12.1415 -1.0613 42 1 4.8137 15.2290 0.5834 43 1 7.6607 15.0518 0.0425 44 1 4.1975 13.8355 -2.0207 45 1 5.3079 15.9836 -2.2855 46 1 5.3184 14.7382 3.2610 47 1 5.2119 13.5541 5.3966 48 1 5.5043 11.1150 5.4852 49 1 5.9012 9.8308 3.4318 50 1 2.1998 5.8875 0.9809 51 1 3.7699 6.2898 1.8019 52 1 1.3342 4.5116 0.0000 53 1 0.2137 2.3201 -0.0014 There are 75 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 75 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_9824364_9818708.mol2 53 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:01:06 Heat of formation + Delta-G solvation = -18.545922 kcal Electronic energy + Delta-G solvation = -37654.817082 eV Core-core repulsion = 32567.826280 eV Total energy + Delta-G solvation = -5086.990802 eV No. of doubly occupied orbitals = 75 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 411.168 amu Computer time = 1.42 seconds Orbital eigenvalues (eV) -49.88226 -42.52639 -41.61932 -40.81983 -39.72185 -38.12802 -37.95693 -37.52947 -34.59174 -33.92616 -31.87468 -31.58491 -31.07968 -30.22290 -28.99833 -28.31720 -26.67573 -26.16829 -25.43055 -23.94409 -23.71894 -22.92992 -22.50283 -21.79869 -20.65537 -20.26060 -19.43599 -18.63494 -18.47117 -18.00134 -17.71865 -17.57059 -17.27704 -17.20587 -16.78429 -16.43926 -16.35606 -16.15539 -16.10450 -15.97518 -15.72019 -15.56605 -15.32150 -15.25304 -15.02142 -14.76248 -14.69628 -14.38418 -14.12696 -14.05145 -13.72006 -13.65296 -13.64180 -13.44331 -13.19248 -13.01681 -12.98426 -12.70537 -12.57543 -12.37195 -12.25568 -12.20585 -12.11577 -11.83728 -11.81222 -11.47663 -11.27644 -11.13238 -10.54411 -10.30185 -10.12043 -9.97780 -9.14912 -9.13623 -8.61525 -5.04789 0.07087 0.14954 0.15617 0.63750 1.35029 1.43745 1.47641 1.65404 1.76907 2.00833 2.16623 2.21537 2.45039 2.95161 3.16173 3.47185 3.57419 3.59530 3.65344 3.69601 3.73069 3.76136 3.78912 3.89493 3.95896 4.03444 4.06701 4.16075 4.19497 4.21142 4.22310 4.30957 4.31283 4.31417 4.48982 4.50654 4.56782 4.63128 4.67776 4.72370 4.78555 4.79359 4.83376 4.88526 4.89311 4.91342 5.02606 5.06729 5.13820 5.15795 5.17126 5.44436 5.50870 5.62588 5.64079 5.66340 5.73747 5.76065 6.21201 6.23696 6.25154 6.50993 6.89709 7.17664 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.018 3.982 2 O -0.340 6.340 3 C 0.073 3.927 4 C 0.035 3.965 5 F -0.152 7.152 6 C -0.110 4.110 7 C -0.079 4.079 8 C -0.059 4.059 9 H 0.119 0.881 10 C -0.124 4.124 11 C 0.116 3.884 12 H 0.080 0.920 13 N -0.693 5.693 14 C 0.493 3.507 15 O -0.574 6.574 16 C 0.087 3.913 17 N -0.466 5.466 18 C 0.081 3.919 19 C -0.227 4.227 20 C -0.042 4.042 21 O -0.561 6.561 22 Si 0.802 3.198 23 C -0.118 4.118 24 C -0.091 4.091 25 C -0.154 4.154 26 C -0.109 4.109 27 C -0.132 4.132 28 C 0.091 3.909 29 C -0.144 4.144 30 C -0.084 4.084 31 C -0.179 4.179 32 H 0.070 0.930 33 H 0.114 0.886 34 H 0.069 0.931 35 H 0.158 0.842 36 H 0.093 0.907 37 H 0.099 0.901 38 H 0.422 0.578 39 H 0.144 0.856 40 H 0.170 0.830 41 H 0.209 0.791 42 H 0.087 0.913 43 H 0.393 0.607 44 H -0.294 1.294 45 H -0.299 1.299 46 H 0.115 0.885 47 H 0.134 0.866 48 H 0.145 0.855 49 H 0.134 0.866 50 H 0.095 0.905 51 H 0.069 0.931 52 H 0.153 0.847 53 H 0.157 0.843 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.559 -4.303 -4.185 6.978 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.076 4.076 2 O -0.254 6.254 3 C 0.027 3.973 4 C 0.015 3.985 5 F -0.130 7.130 6 C -0.129 4.129 7 C -0.079 4.079 8 C -0.077 4.077 9 H 0.137 0.863 10 C -0.161 4.161 11 C 0.010 3.990 12 H 0.098 0.902 13 N -0.347 5.347 14 C 0.279 3.721 15 O -0.452 6.452 16 C -0.037 4.037 17 N -0.148 5.148 18 C -0.044 4.044 19 C -0.234 4.234 20 C -0.151 4.151 21 O -0.369 6.369 22 Si 0.708 3.292 23 C -0.122 4.122 24 C -0.110 4.110 25 C -0.173 4.173 26 C -0.128 4.128 27 C -0.152 4.152 28 C -0.014 4.014 29 C -0.182 4.182 30 C -0.102 4.102 31 C -0.198 4.198 32 H 0.089 0.911 33 H 0.133 0.867 34 H 0.088 0.912 35 H 0.176 0.824 36 H 0.112 0.888 37 H 0.117 0.883 38 H 0.260 0.740 39 H 0.162 0.838 40 H 0.187 0.813 41 H 0.225 0.775 42 H 0.105 0.895 43 H 0.243 0.757 44 H -0.221 1.221 45 H -0.227 1.227 46 H 0.133 0.867 47 H 0.152 0.848 48 H 0.162 0.838 49 H 0.152 0.848 50 H 0.113 0.887 51 H 0.087 0.913 52 H 0.171 0.829 53 H 0.175 0.825 Dipole moment (debyes) X Y Z Total from point charges 2.068 -3.868 -4.525 6.302 hybrid contribution -0.578 -0.426 0.935 1.179 sum 1.490 -4.294 -3.589 5.792 Atomic orbital electron populations 1.23395 0.75829 1.05730 1.02667 1.86110 1.23997 1.26499 1.88811 1.19337 0.91089 0.86421 1.00412 1.17451 0.86544 0.83376 1.11085 1.91456 1.76788 1.50166 1.94630 1.21131 1.01963 0.89087 1.00673 1.19631 0.93262 0.94415 1.00621 1.21577 1.00440 0.88460 0.97257 0.86272 1.23386 1.04292 0.92369 0.96100 1.21791 0.86436 0.93409 0.97333 0.90201 1.45480 1.09633 1.10512 1.69026 1.21505 0.92054 0.82486 0.76071 1.90814 1.37230 1.66078 1.51080 1.22029 0.94428 0.79358 1.07872 1.43457 1.60878 1.06442 1.04047 1.22072 1.00914 0.84667 0.96768 1.20787 1.14866 0.95848 0.91919 1.24584 0.89889 0.88494 1.12130 1.86454 1.17363 1.52277 1.80758 0.94140 0.84107 0.78801 0.72161 1.19370 1.05910 0.92865 0.94048 1.20435 0.99437 0.99549 0.91581 1.20903 1.03391 0.95123 0.97902 1.21121 0.99369 0.94038 0.98308 1.20247 1.05377 1.00039 0.89573 1.18376 1.03454 0.93290 0.86263 1.23573 1.01881 0.94887 0.97890 1.21194 0.94358 0.97681 0.96922 1.21410 1.01389 0.90937 1.06047 0.91106 0.86727 0.91222 0.82391 0.88796 0.88251 0.73997 0.83798 0.81277 0.77454 0.89544 0.75691 1.22131 1.22665 0.86695 0.84772 0.83768 0.84816 0.88670 0.91266 0.82915 0.82531 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.06 9.81 113.37 1.11 1.05 16 2 O -0.34 -2.04 10.36 -93.11 -0.96 -3.01 16 3 C 0.07 0.33 6.69 22.53 0.15 0.48 16 4 C 0.04 0.20 7.31 22.45 0.16 0.36 16 5 F -0.15 -1.57 17.11 44.97 0.77 -0.80 16 6 C -0.11 0.10 9.68 22.30 0.22 0.32 16 7 C -0.08 0.35 5.29 -19.85 -0.11 0.24 16 8 C -0.06 0.55 3.86 -11.01 -0.04 0.51 16 9 H 0.12 -1.52 8.09 -2.38 -0.02 -1.54 16 10 C -0.12 1.24 7.29 31.12 0.23 1.47 16 11 C 0.12 -0.74 4.32 45.52 0.20 -0.55 16 12 H 0.08 -0.03 7.46 -2.39 -0.02 -0.05 16 13 N -0.69 6.51 5.27 -440.04 -2.32 4.19 16 14 C 0.49 -1.47 7.90 87.66 0.69 -0.78 16 15 O -0.57 -5.51 16.02 -3.05 -0.05 -5.56 16 16 C 0.09 -0.81 6.48 85.63 0.56 -0.26 16 17 N -0.47 -0.09 2.27 -519.99 -1.18 -1.27 16 18 C 0.08 -0.04 9.89 83.00 0.82 0.78 16 19 C -0.23 -1.19 5.58 -18.63 -0.10 -1.29 16 20 C -0.04 -0.17 3.06 71.24 0.22 0.05 16 21 O -0.56 -2.25 12.88 -148.98 -1.92 -4.17 16 22 Si 0.80 -0.67 30.75 68.60 2.11 1.44 16 23 C -0.12 -1.16 6.35 -20.20 -0.13 -1.29 16 24 C -0.09 -0.92 10.05 22.23 0.22 -0.70 16 25 C -0.15 -1.09 9.97 22.03 0.22 -0.87 16 26 C -0.11 -0.54 10.01 22.30 0.22 -0.32 16 27 C -0.13 -0.64 10.00 22.37 0.22 -0.41 16 28 C 0.09 0.61 6.79 39.03 0.27 0.87 16 29 C -0.14 0.97 7.25 31.12 0.23 1.19 16 30 C -0.08 0.35 8.60 22.26 0.19 0.54 16 31 C -0.18 0.26 9.04 22.36 0.20 0.46 16 32 H 0.07 -0.43 7.66 -2.38 -0.02 -0.45 16 33 H 0.11 -0.68 8.14 -2.39 -0.02 -0.70 16 34 H 0.07 -0.41 7.66 -2.39 -0.02 -0.43 16 35 H 0.16 -0.82 8.05 -2.91 -0.02 -0.85 16 36 H 0.09 -1.16 8.14 -2.38 -0.02 -1.18 16 37 H 0.10 -0.94 7.72 -2.39 -0.02 -0.95 16 38 H 0.42 -7.12 8.70 -92.70 -0.81 -7.93 16 39 H 0.14 -2.04 8.14 -2.39 -0.02 -2.06 16 40 H 0.17 -3.10 8.12 -2.38 -0.02 -3.12 16 41 H 0.21 -1.97 6.35 -2.91 -0.02 -1.99 16 42 H 0.09 0.67 7.96 -2.39 -0.02 0.65 16 43 H 0.39 -2.06 8.70 -74.05 -0.64 -2.71 16 44 H -0.29 -1.61 7.11 99.48 0.71 -0.90 16 45 H -0.30 -1.91 7.11 99.48 0.71 -1.20 16 46 H 0.11 1.10 8.06 -2.91 -0.02 1.08 16 47 H 0.13 0.42 8.06 -2.91 -0.02 0.40 16 48 H 0.14 -0.02 8.06 -2.91 -0.02 -0.04 16 49 H 0.13 -0.04 8.06 -2.91 -0.02 -0.06 16 50 H 0.09 -0.62 6.30 -2.39 -0.02 -0.63 16 51 H 0.07 -0.34 8.14 -2.39 -0.02 -0.36 16 52 H 0.15 -1.28 6.65 -2.91 -0.02 -1.30 16 53 H 0.16 -0.93 6.30 -2.91 -0.02 -0.95 16 Total: 0.00 -36.33 444.64 1.76 -34.56 By element: Atomic # 1 Polarization: -26.82 SS G_CDS: -0.43 Total: -27.26 kcal Atomic # 6 Polarization: -3.89 SS G_CDS: 5.75 Total: 1.86 kcal Atomic # 7 Polarization: 6.42 SS G_CDS: -3.50 Total: 2.92 kcal Atomic # 8 Polarization: -9.80 SS G_CDS: -2.93 Total: -12.74 kcal Atomic # 9 Polarization: -1.57 SS G_CDS: 0.77 Total: -0.80 kcal Atomic # 14 Polarization: -0.67 SS G_CDS: 2.11 Total: 1.44 kcal Total: -36.33 1.76 -34.56 kcal The number of atoms in the molecule is 53 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_9824364_9818708.mol2 53 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 16.017 kcal (2) G-P(sol) polarization free energy of solvation -36.325 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -20.308 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.762 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -34.563 kcal (6) G-S(sol) free energy of system = (1) + (5) -18.546 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.42 seconds