Wall clock time and date at job start Tue Mar 9 2021 13:01:10 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42905 * 1 3 3 C 1.35957 * 117.00134 * 2 1 4 4 C 1.38902 * 120.06276 * 179.72342 * 3 2 1 5 5 F 1.35099 * 120.04955 * 0.25294 * 4 3 2 6 6 C 1.38331 * 119.90564 * 180.25070 * 4 3 2 7 7 C 1.38260 * 120.03136 * 0.04242 * 6 4 3 8 8 C 1.50701 * 119.93981 * 179.97438 * 7 6 4 9 9 H 1.08997 * 112.84587 * 189.64608 * 8 7 6 10 10 C 1.53779 * 113.61429 * 320.84346 * 8 7 6 11 11 C 1.53944 * 87.01992 * 139.94955 * 10 8 7 12 12 H 1.09002 * 113.66784 * 220.06387 * 11 10 8 13 13 N 1.46507 * 113.53584 * 89.18795 * 11 10 8 14 14 C 1.34779 * 120.00072 * 107.50669 * 13 11 10 15 15 O 1.21629 * 119.99708 * 359.97438 * 14 13 11 16 16 C 1.47259 * 120.00052 * 180.02562 * 14 13 11 17 17 C 1.36773 * 126.93983 * 179.70949 * 16 14 13 18 18 C 1.50696 * 125.80085 * 359.97438 * 17 16 14 19 19 N 1.34665 * 108.39129 * 179.86570 * 17 16 14 20 20 C 1.36443 * 110.29820 * 0.41018 * 19 17 16 21 21 C 1.50700 * 125.56924 * 179.77358 * 20 19 17 22 22 O 1.42898 * 109.47101 * 244.97165 * 21 20 19 23 23 Si 1.86303 * 109.47251 * 4.96723 * 21 20 19 24 24 C 1.34485 * 108.86117 * 359.74570 * 20 19 17 25 25 C 1.53776 * 87.11451 * 334.63822 * 11 10 8 26 26 C 1.38267 * 120.12266 * 359.95517 * 7 6 4 27 27 C 1.38177 * 120.09523 * 0.02562 * 26 7 6 28 28 H 1.08998 * 109.46899 * 300.00351 * 1 2 3 29 29 H 1.08998 * 109.46995 * 60.00320 * 1 2 3 30 30 H 1.08997 * 109.47223 * 180.02562 * 1 2 3 31 31 H 1.08004 * 119.98933 * 180.02562 * 6 4 3 32 32 H 1.08998 * 113.61400 * 254.53427 * 10 8 7 33 33 H 1.09000 * 113.61368 * 25.42603 * 10 8 7 34 34 H 0.96998 * 119.99908 * 287.50453 * 13 11 10 35 35 H 1.09005 * 109.47039 * 90.00726 * 18 17 16 36 36 H 1.09001 * 109.46781 * 209.99960 * 18 17 16 37 37 H 1.08999 * 109.47560 * 330.00133 * 18 17 16 38 38 H 0.97000 * 124.84268 * 180.17375 * 19 17 16 39 39 H 1.09002 * 109.47350 * 124.97298 * 21 20 19 40 40 H 0.96701 * 114.00506 * 59.99603 * 22 21 20 41 41 H 1.48495 * 110.00171 * 180.02562 * 23 21 20 42 42 H 1.48492 * 110.00135 * 301.32393 * 23 21 20 43 43 H 1.07994 * 126.83695 * 179.97438 * 24 20 19 44 44 H 1.09007 * 113.61248 * 270.81396 * 25 11 10 45 45 H 1.09001 * 113.62047 * 139.90941 * 25 11 10 46 46 H 1.08001 * 119.95246 * 179.97438 * 26 7 6 47 47 H 1.07998 * 120.01480 * 179.97438 * 27 26 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0463 1.2114 0.0000 4 6 3.4333 1.2856 0.0058 5 9 4.1713 0.1540 0.0063 6 6 4.0580 2.5198 0.0110 7 6 3.3024 3.6777 0.0114 8 6 3.9851 5.0212 0.0177 9 1 3.2933 5.8466 0.1856 10 6 5.2348 5.0730 0.9122 11 6 5.8932 5.9172 -0.1940 12 1 6.9400 5.6689 -0.3694 13 7 5.6659 7.3568 -0.0448 14 6 6.6740 8.1612 0.3466 15 8 7.7723 7.6919 0.5764 16 6 6.4455 9.6082 0.4970 17 6 7.3586 10.5483 0.8884 18 6 8.7978 10.2832 1.2478 19 7 6.7534 11.7512 0.8956 20 6 5.4467 11.6260 0.5232 21 6 4.4528 12.7540 0.4193 22 8 3.4204 12.5701 1.3900 23 14 5.3174 14.3743 0.7319 24 6 5.1908 10.3315 0.2635 25 6 4.9259 5.2397 -1.1789 26 6 1.9217 3.6053 0.0055 27 6 1.2924 2.3751 -0.0001 28 1 -0.3633 0.5139 0.8899 29 1 -0.3633 0.5138 -0.8900 30 1 -0.3633 -1.0276 0.0005 31 1 5.1364 2.5791 0.0151 32 1 5.0820 5.6162 1.8448 33 1 5.7068 4.1016 1.0596 34 1 4.7899 7.7310 -0.2278 35 1 9.4164 10.3639 0.3539 36 1 9.1285 11.0142 1.9857 37 1 8.8897 9.2799 1.6639 38 1 7.1840 12.5868 1.1348 39 1 4.0155 12.7621 -0.5791 40 1 3.7377 12.5526 2.3033 41 1 4.3479 15.4948 0.6329 42 1 5.9450 14.3638 2.0776 43 1 4.2490 9.9085 -0.0534 44 1 5.3134 4.3140 -1.6044 45 1 4.5241 5.9173 -1.9323 46 1 1.3342 4.5115 0.0062 47 1 0.2138 2.3201 -0.0042 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_9824364_9865296.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:01:10 Heat of formation + Delta-G solvation = -49.484645 kcal Electronic energy + Delta-G solvation = -31229.679347 eV Core-core repulsion = 26681.562982 eV Total energy + Delta-G solvation = -4548.116365 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 361.152 amu Computer time = 0.96 seconds Orbital eigenvalues (eV) -49.87663 -42.48033 -41.51380 -40.66807 -39.44748 -37.96030 -37.77886 -34.42569 -32.79622 -32.15737 -31.75645 -31.03240 -28.92677 -28.47065 -26.65871 -26.24788 -25.25662 -23.95800 -23.48153 -22.47678 -21.53916 -20.74587 -20.09907 -19.38539 -18.73884 -18.11936 -17.80419 -17.66734 -17.19068 -16.95916 -16.82632 -16.60567 -16.13542 -16.08991 -15.83733 -15.66808 -15.58701 -15.24024 -14.97608 -14.92637 -14.52333 -14.39448 -14.06573 -13.95904 -13.91172 -13.80488 -13.51213 -13.42927 -13.35122 -13.06125 -12.86066 -12.74486 -12.60220 -12.20223 -12.14687 -12.13222 -11.99049 -11.44229 -11.19714 -11.00069 -10.60017 -10.10662 -9.95561 -9.77948 -9.15100 -9.11395 -5.03978 0.09616 0.17082 0.71360 1.14524 1.29320 1.45692 1.82642 2.04972 2.18209 2.41321 2.46980 2.54100 3.17988 3.35605 3.49472 3.66646 3.68297 3.73697 3.76045 3.88885 3.94493 4.01328 4.12098 4.20996 4.24347 4.28372 4.34002 4.34269 4.51612 4.52553 4.57024 4.67506 4.69365 4.73631 4.79138 4.80649 4.88110 4.91426 4.93274 5.05238 5.06027 5.09160 5.13355 5.21945 5.30792 5.51976 5.64063 5.69981 5.73145 5.87969 6.26239 6.41009 6.46182 6.68764 7.38004 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.017 3.983 2 O -0.340 6.340 3 C 0.074 3.926 4 C 0.035 3.965 5 F -0.152 7.152 6 C -0.114 4.114 7 C -0.079 4.079 8 C -0.057 4.057 9 H 0.121 0.879 10 C -0.146 4.146 11 C 0.117 3.883 12 H 0.084 0.916 13 N -0.698 5.698 14 C 0.589 3.411 15 O -0.587 6.587 16 C -0.264 4.264 17 C 0.118 3.882 18 C -0.097 4.097 19 N -0.536 5.536 20 C -0.022 4.022 21 C -0.045 4.045 22 O -0.540 6.540 23 Si 0.752 3.248 24 C -0.134 4.134 25 C -0.127 4.127 26 C -0.078 4.078 27 C -0.178 4.178 28 H 0.070 0.930 29 H 0.071 0.929 30 H 0.114 0.886 31 H 0.149 0.851 32 H 0.068 0.932 33 H 0.092 0.908 34 H 0.413 0.587 35 H 0.087 0.913 36 H 0.087 0.913 37 H 0.080 0.920 38 H 0.425 0.575 39 H 0.141 0.859 40 H 0.387 0.613 41 H -0.294 1.294 42 H -0.276 1.276 43 H 0.160 0.840 44 H 0.097 0.903 45 H 0.091 0.909 46 H 0.162 0.838 47 H 0.161 0.839 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.818 6.860 -1.716 8.036 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.076 4.076 2 O -0.255 6.255 3 C 0.028 3.972 4 C 0.016 3.984 5 F -0.131 7.131 6 C -0.133 4.133 7 C -0.080 4.080 8 C -0.075 4.075 9 H 0.139 0.861 10 C -0.184 4.184 11 C 0.012 3.988 12 H 0.102 0.898 13 N -0.348 5.348 14 C 0.380 3.620 15 O -0.469 6.469 16 C -0.274 4.274 17 C -0.002 4.002 18 C -0.154 4.154 19 N -0.136 5.136 20 C -0.130 4.130 21 C -0.155 4.155 22 O -0.347 6.347 23 Si 0.655 3.345 24 C -0.158 4.158 25 C -0.164 4.164 26 C -0.096 4.096 27 C -0.197 4.197 28 H 0.089 0.911 29 H 0.090 0.910 30 H 0.132 0.868 31 H 0.167 0.833 32 H 0.086 0.914 33 H 0.110 0.890 34 H 0.249 0.751 35 H 0.105 0.895 36 H 0.106 0.894 37 H 0.099 0.901 38 H 0.266 0.734 39 H 0.159 0.841 40 H 0.236 0.764 41 H -0.221 1.221 42 H -0.202 1.202 43 H 0.178 0.822 44 H 0.116 0.884 45 H 0.109 0.891 46 H 0.179 0.821 47 H 0.179 0.821 Dipole moment (debyes) X Y Z Total from point charges -3.267 7.123 -1.564 7.991 hybrid contribution -0.706 -0.558 1.143 1.454 sum -3.973 6.565 -0.422 7.685 Atomic orbital electron populations 1.23404 0.75755 1.05731 1.02749 1.86110 1.24076 1.26462 1.88813 1.19317 0.90903 0.86555 1.00394 1.17396 0.86670 0.83157 1.11220 1.91452 1.76879 1.50141 1.94656 1.21002 1.01683 0.89455 1.01139 1.19619 0.93462 0.94170 1.00701 1.21550 0.95332 0.93723 0.96898 0.86120 1.23598 0.96273 1.00694 0.97860 1.21829 0.99991 0.79830 0.97186 0.89759 1.45321 1.13846 1.06658 1.68996 1.17621 0.83524 0.85689 0.75202 1.90734 1.25682 1.77306 1.53133 1.20166 0.96112 0.92179 1.18923 1.20549 0.95896 0.84329 0.99413 1.20612 0.87841 1.04016 1.02981 1.41715 1.09490 1.08855 1.53534 1.20614 0.85297 0.97367 1.09738 1.24595 0.90968 1.02839 0.97099 1.86630 1.34074 1.94293 1.19744 0.94563 0.82835 0.73150 0.83911 1.21980 0.97156 0.91772 1.04897 1.23391 0.95270 1.01497 0.96285 1.21310 0.93861 0.98097 0.96355 1.21453 1.01488 0.90839 1.05905 0.91124 0.91007 0.86763 0.83319 0.91354 0.88999 0.75055 0.89493 0.89379 0.90147 0.73360 0.84110 0.76401 1.22116 1.20192 0.82202 0.88413 0.89066 0.82054 0.82142 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.05 9.81 113.37 1.11 1.07 16 2 O -0.34 -2.46 10.36 -93.07 -0.96 -3.42 16 3 C 0.07 0.45 6.69 22.53 0.15 0.61 16 4 C 0.04 0.29 7.31 22.45 0.16 0.45 16 5 F -0.15 -1.98 17.11 44.97 0.77 -1.21 16 6 C -0.11 -0.32 8.51 22.30 0.19 -0.13 16 7 C -0.08 0.10 5.29 -19.85 -0.11 0.00 16 8 C -0.06 0.27 3.85 -11.01 -0.04 0.22 16 9 H 0.12 -1.00 8.08 -2.39 -0.02 -1.02 16 10 C -0.15 0.16 7.27 31.18 0.23 0.38 16 11 C 0.12 0.01 4.33 45.57 0.20 0.21 16 12 H 0.08 0.41 7.47 -2.39 -0.02 0.39 16 13 N -0.70 -0.14 5.26 -443.18 -2.33 -2.47 16 14 C 0.59 3.89 7.81 86.61 0.68 4.56 16 15 O -0.59 -8.05 14.42 -4.12 -0.06 -8.11 16 16 C -0.26 -0.86 6.29 -19.04 -0.12 -0.98 16 17 C 0.12 0.12 7.18 41.78 0.30 0.42 16 18 C -0.10 0.03 9.88 71.23 0.70 0.74 16 19 N -0.54 2.13 5.41 -171.07 -0.93 1.20 16 20 C -0.02 0.07 6.09 40.98 0.25 0.32 16 21 C -0.04 0.24 2.98 71.24 0.21 0.46 16 22 O -0.54 1.13 12.88 -148.98 -1.92 -0.79 16 23 Si 0.75 -5.05 30.96 68.60 2.12 -2.93 16 24 C -0.13 0.15 10.45 23.62 0.25 0.39 16 25 C -0.13 0.55 7.29 31.12 0.23 0.77 16 26 C -0.08 0.23 9.70 22.26 0.22 0.45 16 27 C -0.18 0.08 9.04 22.36 0.20 0.28 16 28 H 0.07 -0.38 7.67 -2.39 -0.02 -0.40 16 29 H 0.07 -0.40 7.66 -2.39 -0.02 -0.42 16 30 H 0.11 -0.60 8.14 -2.39 -0.02 -0.62 16 31 H 0.15 0.08 6.72 -2.91 -0.02 0.06 16 32 H 0.07 0.06 8.14 -2.39 -0.02 0.04 16 33 H 0.09 -0.05 6.39 -2.39 -0.02 -0.07 16 34 H 0.41 -2.09 7.82 -92.71 -0.73 -2.82 16 35 H 0.09 -0.12 8.14 -2.38 -0.02 -0.14 16 36 H 0.09 -0.47 8.14 -2.39 -0.02 -0.49 16 37 H 0.08 0.41 6.47 -2.39 -0.02 0.40 16 38 H 0.43 -3.84 6.72 -92.71 -0.62 -4.46 16 39 H 0.14 -1.07 7.96 -2.39 -0.02 -1.09 16 40 H 0.39 -2.70 8.70 -74.06 -0.64 -3.34 16 41 H -0.29 -0.48 7.11 99.48 0.71 0.23 16 42 H -0.28 0.96 7.11 99.48 0.71 1.67 16 43 H 0.16 -0.77 7.69 -2.91 -0.02 -0.79 16 44 H 0.10 -0.37 7.63 -2.38 -0.02 -0.38 16 45 H 0.09 -0.58 8.14 -2.39 -0.02 -0.60 16 46 H 0.16 -1.44 8.05 -2.91 -0.02 -1.46 16 47 H 0.16 -0.92 6.30 -2.91 -0.02 -0.94 16 Total: 0.00 -24.37 392.41 0.60 -23.77 By element: Atomic # 1 Polarization: -15.35 SS G_CDS: -0.90 Total: -16.25 kcal Atomic # 6 Polarization: 5.41 SS G_CDS: 4.81 Total: 10.21 kcal Atomic # 7 Polarization: 1.99 SS G_CDS: -3.25 Total: -1.27 kcal Atomic # 8 Polarization: -9.38 SS G_CDS: -2.94 Total: -12.32 kcal Atomic # 9 Polarization: -1.98 SS G_CDS: 0.77 Total: -1.21 kcal Atomic # 14 Polarization: -5.05 SS G_CDS: 2.12 Total: -2.93 kcal Total: -24.37 0.60 -23.77 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_9824364_9865296.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -25.716 kcal (2) G-P(sol) polarization free energy of solvation -24.370 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -50.086 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.601 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.769 kcal (6) G-S(sol) free energy of system = (1) + (5) -49.485 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.96 seconds