Wall clock time and date at job start Tue Mar 9 2021 13:01:13 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42902 * 1 3 3 C 1.42898 * 113.99945 * 2 1 4 4 H 1.09002 * 112.85240 * 20.32953 * 3 2 1 5 5 C 1.53781 * 113.61632 * 151.52718 * 3 2 1 6 6 C 1.53777 * 87.08336 * 140.05947 * 5 3 2 7 7 H 1.09008 * 113.61204 * 89.11878 * 6 5 3 8 8 N 1.46492 * 113.61596 * 219.93501 * 6 5 3 9 9 C 1.34774 * 120.00245 * 205.00267 * 8 6 5 10 10 O 1.21596 * 119.99807 * 0.02562 * 9 8 6 11 11 C 1.47584 * 120.00414 * 180.02562 * 9 8 6 12 12 C 1.36497 * 120.01048 * 179.97438 * 11 9 8 13 13 N 1.35949 * 120.50566 * 179.97438 * 12 11 9 14 14 C 1.36992 * 132.41520 * 179.97438 * 13 12 11 15 15 C 1.50705 * 126.42876 * 359.97438 * 14 13 12 16 16 O 1.42895 * 109.46969 * 30.00237 * 15 14 13 17 17 Si 1.86294 * 109.47153 * 150.00460 * 15 14 13 18 18 C 1.35001 * 107.14370 * 180.02562 * 14 13 12 19 19 N 1.33584 * 108.65597 * 0.02562 * 18 14 13 20 20 C 1.32416 * 109.22338 * 359.97438 * 19 18 14 21 21 C 1.41250 * 132.11726 * 180.02562 * 20 19 18 22 22 Br 1.89098 * 120.25384 * 359.97438 * 21 20 19 23 23 C 1.35702 * 119.48827 * 179.76167 * 21 20 19 24 24 C 1.53775 * 87.07992 * 334.56762 * 6 5 3 25 25 H 1.08997 * 109.47415 * 300.00867 * 1 2 3 26 26 H 1.09004 * 109.47039 * 60.00584 * 1 2 3 27 27 H 1.08998 * 109.47251 * 179.97438 * 1 2 3 28 28 H 1.08997 * 113.61673 * 254.61496 * 5 3 2 29 29 H 1.09009 * 113.61202 * 25.42726 * 5 3 2 30 30 H 0.97005 * 120.00166 * 24.99923 * 8 6 5 31 31 H 1.07998 * 119.74373 * 359.97438 * 12 11 9 32 32 H 1.09001 * 109.47358 * 270.00376 * 15 14 13 33 33 H 0.96696 * 114.00269 * 59.99877 * 16 15 14 34 34 H 1.48500 * 110.00200 * 58.68026 * 17 15 14 35 35 H 1.48501 * 110.00065 * 180.02562 * 17 15 14 36 36 H 1.08004 * 125.67542 * 179.97438 * 18 14 13 37 37 H 1.08001 * 120.23405 * 180.22865 * 23 21 20 38 38 H 1.08993 * 113.61636 * 270.87622 * 24 6 5 39 39 H 1.09008 * 113.61006 * 139.97865 * 24 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0102 1.3054 0.0000 4 1 1.3219 2.0753 0.3490 5 6 3.3923 1.3645 0.6717 6 6 3.8114 2.3246 -0.4540 7 1 3.6155 3.3731 -0.2292 8 7 5.1713 2.0929 -0.9469 9 6 5.8576 3.0968 -1.5280 10 8 5.3482 4.1949 -1.6427 11 6 7.2275 2.8633 -2.0251 12 6 7.9225 3.8798 -2.6141 13 7 9.1851 3.6760 -3.0751 14 6 10.0874 4.5009 -3.6933 15 6 9.8809 5.9528 -4.0405 16 8 8.9904 6.5469 -3.0940 17 14 11.5179 6.8409 -3.9956 18 6 11.1959 3.7688 -3.9340 19 7 10.9947 2.5277 -3.4827 20 6 9.7821 2.4462 -2.9569 21 6 9.0823 1.3796 -2.3505 22 35 9.8947 -0.3196 -2.1825 23 6 7.8241 1.5849 -1.8855 24 6 2.7213 1.6651 -1.3152 25 1 -0.3634 0.5139 0.8899 26 1 -0.3633 0.5138 -0.8901 27 1 -0.3633 -1.0276 -0.0005 28 1 3.3789 1.8277 1.6583 29 1 3.9255 0.4138 0.6578 30 1 5.5779 1.2170 -0.8551 31 1 7.4659 4.8533 -2.7146 32 1 9.4530 6.0300 -5.0401 33 1 9.3077 6.5142 -2.1812 34 1 12.4633 6.2123 -4.9528 35 1 11.3278 8.2739 -4.3357 36 1 12.0954 4.1268 -4.4128 37 1 7.2793 0.7789 -1.4165 38 1 3.0717 0.7972 -1.8737 39 1 2.1661 2.3713 -1.9328 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_9984030_12335884.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:01:13 Heat of formation + Delta-G solvation = 24.069985 kcal Electronic energy + Delta-G solvation = -26343.410139 eV Core-core repulsion = 22301.994782 eV Total energy + Delta-G solvation = -4041.415357 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 382.036 amu Computer time = 0.65 seconds Orbital eigenvalues (eV) -44.29180 -41.49416 -40.08180 -38.49388 -38.01398 -37.28373 -35.40639 -34.36956 -32.45819 -31.79482 -30.27123 -27.85665 -26.92185 -26.76652 -26.24086 -24.28410 -24.10643 -22.58228 -21.87678 -21.11427 -19.53442 -18.70643 -18.21948 -18.16127 -17.67786 -17.46171 -16.80428 -16.59893 -16.32757 -16.11854 -15.94296 -15.82605 -15.65822 -15.30162 -15.15491 -14.80447 -14.63499 -14.06364 -13.58333 -13.46164 -13.44688 -13.33427 -13.02931 -12.75235 -12.69122 -12.21451 -12.15382 -12.13957 -11.85314 -11.54672 -11.36780 -11.35188 -11.25494 -10.90185 -10.47189 -10.26165 -10.02492 -9.10744 -4.95519 -0.91938 -0.39576 0.18360 0.95658 1.09340 1.39893 1.65786 1.76749 1.89244 1.99982 2.20564 2.78584 2.89277 3.07964 3.18049 3.35368 3.42786 3.46287 3.47801 3.54460 3.79686 3.82675 3.90940 4.10046 4.23078 4.32217 4.32799 4.41699 4.48400 4.52922 4.55715 4.72588 4.74269 4.86933 4.91983 4.96146 4.96699 5.02331 5.24766 5.39342 5.55069 6.25360 6.31039 6.41293 6.49908 6.94455 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.024 3.976 2 O -0.396 6.396 3 C 0.059 3.941 4 H 0.103 0.897 5 C -0.133 4.133 6 C 0.125 3.875 7 H 0.114 0.886 8 N -0.695 5.695 9 C 0.581 3.419 10 O -0.564 6.564 11 C -0.169 4.169 12 C 0.162 3.838 13 N -0.356 5.356 14 C -0.080 4.080 15 C -0.044 4.044 16 O -0.553 6.553 17 Si 0.805 3.195 18 C 0.035 3.965 19 N -0.493 5.493 20 C 0.227 3.773 21 C -0.081 4.081 22 Br 0.005 6.995 23 C -0.023 4.023 24 C -0.169 4.169 25 H 0.052 0.948 26 H 0.046 0.954 27 H 0.091 0.909 28 H 0.094 0.906 29 H 0.104 0.896 30 H 0.416 0.584 31 H 0.195 0.805 32 H 0.120 0.880 33 H 0.396 0.604 34 H -0.267 1.267 35 H -0.287 1.287 36 H 0.208 0.792 37 H 0.184 0.816 38 H 0.092 0.908 39 H 0.071 0.929 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.892 0.073 4.071 4.490 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.073 4.073 2 O -0.315 6.315 3 C 0.001 3.999 4 H 0.121 0.879 5 C -0.171 4.171 6 C 0.020 3.980 7 H 0.132 0.868 8 N -0.346 5.346 9 C 0.367 3.633 10 O -0.443 6.443 11 C -0.176 4.176 12 C 0.036 3.964 13 N -0.029 5.029 14 C -0.191 4.191 15 C -0.153 4.153 16 O -0.360 6.360 17 Si 0.706 3.294 18 C -0.114 4.114 19 N -0.212 5.212 20 C -0.018 4.018 21 C -0.163 4.163 22 Br 0.090 6.910 23 C -0.049 4.049 24 C -0.208 4.208 25 H 0.071 0.929 26 H 0.065 0.935 27 H 0.110 0.890 28 H 0.112 0.888 29 H 0.122 0.878 30 H 0.255 0.745 31 H 0.212 0.788 32 H 0.137 0.863 33 H 0.246 0.754 34 H -0.193 1.193 35 H -0.214 1.214 36 H 0.225 0.775 37 H 0.201 0.799 38 H 0.111 0.889 39 H 0.090 0.910 Dipole moment (debyes) X Y Z Total from point charges -0.999 0.008 2.998 3.160 hybrid contribution -1.269 0.382 -0.600 1.455 sum -2.268 0.389 2.397 3.323 Atomic orbital electron populations 1.22944 0.79918 1.03637 1.00758 1.87903 1.21074 1.27823 1.94676 1.23573 0.94418 0.85587 0.96351 0.87874 1.23578 0.94804 1.00218 0.98542 1.22257 0.79822 1.00638 0.95273 0.86776 1.45661 1.15837 1.13790 1.59333 1.17577 0.84037 0.84328 0.77334 1.90845 1.70414 1.25087 1.57988 1.19245 0.96403 0.94016 1.07980 1.22261 0.81754 1.01967 0.90459 1.42710 1.11148 1.10751 1.38310 1.22362 0.91012 0.96359 1.09393 1.25177 1.08361 0.86460 0.95294 1.86481 1.47696 1.80447 1.21417 0.93053 0.72230 0.75277 0.88822 1.22852 0.98931 0.88640 1.01004 1.70827 1.12698 1.21217 1.16476 1.20697 0.91398 0.85891 1.03861 1.20558 0.96323 0.92414 1.06997 1.96844 1.82262 1.15206 1.96665 1.21357 0.91921 0.96804 0.94841 1.24019 0.97542 1.01215 0.98049 0.92902 0.93532 0.89025 0.88765 0.87761 0.74547 0.78845 0.86292 0.75395 1.19251 1.21353 0.77536 0.79855 0.88921 0.90992 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.07 10.85 113.37 1.23 1.16 16 2 O -0.40 -0.34 10.72 -148.98 -1.60 -1.93 16 3 C 0.06 -0.19 4.30 31.12 0.13 -0.06 16 4 H 0.10 -0.57 7.88 -2.39 -0.02 -0.59 16 5 C -0.13 0.78 7.66 31.12 0.24 1.02 16 6 C 0.12 -0.45 4.24 45.52 0.19 -0.26 16 7 H 0.11 -0.14 7.46 -2.38 -0.02 -0.16 16 8 N -0.69 2.99 5.31 -443.16 -2.35 0.64 16 9 C 0.58 0.60 7.76 86.71 0.67 1.27 16 10 O -0.56 -4.68 15.87 -4.02 -0.06 -4.74 16 11 C -0.17 0.07 5.84 -20.35 -0.12 -0.05 16 12 C 0.16 0.23 9.91 83.65 0.83 1.06 16 13 N -0.36 -1.09 2.93 -337.71 -0.99 -2.08 16 14 C -0.08 -0.08 6.24 41.01 0.26 0.18 16 15 C -0.04 0.12 3.06 71.24 0.22 0.34 16 16 O -0.55 1.34 10.90 -148.98 -1.62 -0.28 16 17 Si 0.81 -4.44 31.34 68.60 2.15 -2.29 16 18 C 0.04 0.09 10.44 83.68 0.87 0.97 16 19 N -0.49 -3.99 11.30 -194.10 -2.19 -6.19 16 20 C 0.23 1.37 7.59 134.18 1.02 2.38 16 21 C -0.08 -0.20 6.24 22.42 0.14 -0.06 16 22 Br 0.00 0.01 33.72 -20.37 -0.69 -0.67 16 23 C -0.02 0.06 9.26 22.55 0.21 0.27 16 24 C -0.17 0.44 7.71 31.12 0.24 0.68 16 25 H 0.05 -0.27 8.14 -2.39 -0.02 -0.29 16 26 H 0.05 -0.18 8.14 -2.39 -0.02 -0.20 16 27 H 0.09 -0.40 8.14 -2.39 -0.02 -0.42 16 28 H 0.09 -0.69 8.14 -2.39 -0.02 -0.71 16 29 H 0.10 -0.70 8.12 -2.38 -0.02 -0.72 16 30 H 0.42 -4.00 6.76 -92.70 -0.63 -4.63 16 31 H 0.19 0.28 6.19 -2.91 -0.02 0.26 16 32 H 0.12 -0.26 7.96 -2.39 -0.02 -0.28 16 33 H 0.40 -3.67 8.70 -74.06 -0.64 -4.32 16 34 H -0.27 0.63 6.80 99.48 0.68 1.31 16 35 H -0.29 -0.37 7.11 99.48 0.71 0.34 16 36 H 0.21 -0.50 6.70 -2.91 -0.02 -0.52 16 37 H 0.18 -1.77 6.44 -2.91 -0.02 -1.79 16 38 H 0.09 -0.17 8.14 -2.39 -0.02 -0.19 16 39 H 0.07 -0.10 8.14 -2.38 -0.02 -0.12 16 Total: 0.00 -20.33 352.18 -1.36 -21.69 By element: Atomic # 1 Polarization: -12.90 SS G_CDS: -0.14 Total: -13.04 kcal Atomic # 6 Polarization: 2.77 SS G_CDS: 6.13 Total: 8.90 kcal Atomic # 7 Polarization: -2.10 SS G_CDS: -5.54 Total: -7.63 kcal Atomic # 8 Polarization: -3.68 SS G_CDS: -3.28 Total: -6.96 kcal Atomic # 14 Polarization: -4.44 SS G_CDS: 2.15 Total: -2.29 kcal Atomic # 35 Polarization: 0.01 SS G_CDS: -0.69 Total: -0.67 kcal Total: -20.33 -1.36 -21.69 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_9984030_12335884.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 45.757 kcal (2) G-P(sol) polarization free energy of solvation -20.327 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 25.431 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.361 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.687 kcal (6) G-S(sol) free energy of system = (1) + (5) 24.070 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.65 seconds