Wall clock time and date at job start Tue Mar 9 2021 13:01:17 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42902 * 1 3 3 C 1.42901 * 113.99678 * 2 1 4 4 H 1.08998 * 112.85173 * 18.80336 * 3 2 1 5 5 C 1.53787 * 113.61020 * 149.99776 * 3 2 1 6 6 C 1.53784 * 87.07923 * 139.98045 * 5 3 2 7 7 H 1.09002 * 113.61478 * 89.11632 * 6 5 3 8 8 N 1.46497 * 113.61569 * 220.01663 * 6 5 3 9 9 C 1.34769 * 120.00274 * 204.99925 * 8 6 5 10 10 O 1.21566 * 119.99906 * 359.97438 * 9 8 6 11 11 C 1.47712 * 120.00009 * 180.02562 * 9 8 6 12 12 N 1.31811 * 126.51792 * 359.68825 * 11 9 8 13 13 N 1.28474 * 110.06764 * 179.86005 * 12 11 9 14 14 C 1.46503 * 124.87631 * 180.13268 * 13 12 11 15 15 C 1.35028 * 110.23585 * 0.41301 * 13 12 11 16 16 C 1.50700 * 126.38648 * 179.76758 * 15 13 12 17 17 O 1.42904 * 109.46917 * 30.00695 * 16 15 13 18 18 Si 1.86303 * 109.47036 * 150.00252 * 16 15 13 19 19 C 1.35371 * 107.22590 * 359.75379 * 15 13 12 20 20 C 1.53779 * 87.08045 * 334.56667 * 6 5 3 21 21 H 1.08995 * 109.47477 * 300.00200 * 1 2 3 22 22 H 1.09003 * 109.47192 * 60.00213 * 1 2 3 23 23 H 1.09004 * 109.47150 * 180.02562 * 1 2 3 24 24 H 1.09004 * 113.61202 * 254.52798 * 5 3 2 25 25 H 1.08994 * 113.61447 * 25.43229 * 5 3 2 26 26 H 0.97009 * 119.99534 * 24.99936 * 8 6 5 27 27 H 1.09003 * 109.47091 * 270.31841 * 14 13 12 28 28 H 1.08993 * 109.47540 * 30.32686 * 14 13 12 29 29 H 1.09004 * 109.46808 * 150.32815 * 14 13 12 30 30 H 1.08993 * 109.47223 * 270.00374 * 16 15 13 31 31 H 0.96696 * 113.99645 * 59.99739 * 17 16 15 32 32 H 1.48490 * 110.00100 * 180.02562 * 18 16 15 33 33 H 1.48501 * 110.00236 * 301.32514 * 18 16 15 34 34 H 1.08001 * 127.24080 * 179.97438 * 19 15 13 35 35 H 1.09006 * 113.61307 * 270.88660 * 20 6 5 36 36 H 1.08999 * 113.69146 * 139.99146 * 20 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0102 1.3055 0.0000 4 1 1.3137 2.0789 0.3238 5 6 3.3755 1.3719 0.7046 6 6 3.8227 2.3182 -0.4221 7 1 3.6222 3.3694 -0.2149 8 7 5.1935 2.0787 -0.8802 9 6 5.8950 3.0746 -1.4566 10 8 5.3902 4.1716 -1.5969 11 6 7.2770 2.8329 -1.9190 12 7 7.9482 1.7022 -1.8276 13 7 9.1214 1.8441 -2.3316 14 6 10.1361 0.7896 -2.4018 15 6 9.2869 3.1063 -2.7817 16 6 10.5241 3.6680 -3.4335 17 8 11.2090 2.6265 -4.1323 18 14 10.0396 5.0073 -4.6346 19 6 8.1340 3.7730 -2.5386 20 6 2.7535 1.6489 -1.3017 21 1 -0.3634 0.5138 0.8899 22 1 -0.3634 0.5138 -0.8900 23 1 -0.3634 -1.0277 0.0005 24 1 3.3383 1.8471 1.6849 25 1 3.9088 0.4214 0.7139 26 1 5.5961 1.2032 -0.7686 27 1 10.7445 0.8101 -1.4975 28 1 9.6467 -0.1804 -2.4887 29 1 10.7722 0.9549 -3.2714 30 1 11.1798 4.0851 -2.6694 31 1 10.6840 2.2090 -4.8288 32 1 11.2508 5.5690 -5.2845 33 1 9.1199 4.4587 -5.6633 34 1 7.9149 4.8051 -2.7689 35 1 3.1167 0.7739 -1.8409 36 1 2.2134 2.3465 -1.9418 There are 49 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 49 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV m_22_9984030_13259642.mol2 36 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:01:17 Heat of formation + Delta-G solvation = 5.139254 kcal Electronic energy + Delta-G solvation = -20295.486292 eV Core-core repulsion = 16977.746462 eV Total energy + Delta-G solvation = -3317.739830 eV No. of doubly occupied orbitals = 49 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 268.126 amu Computer time = 0.40 seconds Orbital eigenvalues (eV) -43.79958 -41.03315 -39.54840 -38.37434 -37.18535 -34.51897 -33.95260 -32.52989 -28.77681 -27.80767 -26.90815 -26.73722 -25.38847 -23.48382 -22.15661 -21.20978 -20.71608 -19.14065 -18.18138 -17.58422 -17.46844 -17.21431 -16.80667 -16.23612 -16.13175 -16.07184 -15.82950 -15.48268 -15.03900 -14.93847 -14.55508 -14.14669 -13.83474 -13.54093 -13.47804 -13.36992 -12.77059 -12.68637 -12.29789 -12.12617 -12.11668 -11.94846 -11.84572 -11.11034 -11.00264 -10.46293 -10.18897 -9.95092 -9.90754 -5.02372 0.55274 0.82835 1.16122 1.48581 1.59874 1.87653 2.15375 2.47950 2.85329 2.91892 3.29747 3.36202 3.47039 3.55598 3.82938 3.86383 3.97476 4.08166 4.23854 4.28019 4.32055 4.43872 4.46106 4.47208 4.53154 4.69244 4.72057 4.73881 4.78061 4.93869 4.98899 5.09483 5.32420 5.55212 5.64618 5.98618 6.24262 6.50977 6.89078 7.28693 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.029 3.971 2 O -0.376 6.376 3 C 0.064 3.936 4 H 0.093 0.907 5 C -0.144 4.144 6 C 0.125 3.875 7 H 0.122 0.878 8 N -0.706 5.706 9 C 0.609 3.391 10 O -0.529 6.529 11 C -0.018 4.018 12 N -0.257 5.257 13 N -0.264 5.264 14 C 0.070 3.930 15 C -0.020 4.020 16 C -0.049 4.049 17 O -0.530 6.530 18 Si 0.716 3.284 19 C -0.170 4.170 20 C -0.168 4.168 21 H 0.043 0.957 22 H 0.043 0.957 23 H 0.086 0.914 24 H 0.083 0.917 25 H 0.097 0.903 26 H 0.408 0.592 27 H 0.085 0.915 28 H 0.093 0.907 29 H 0.117 0.883 30 H 0.129 0.871 31 H 0.379 0.621 32 H -0.249 1.249 33 H -0.255 1.255 34 H 0.172 0.828 35 H 0.094 0.906 36 H 0.077 0.923 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.936 -0.887 0.316 1.328 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.068 4.068 2 O -0.294 6.294 3 C 0.005 3.995 4 H 0.111 0.889 5 C -0.182 4.182 6 C 0.020 3.980 7 H 0.140 0.860 8 N -0.357 5.357 9 C 0.393 3.607 10 O -0.403 6.403 11 C -0.177 4.177 12 N -0.094 5.094 13 N -0.053 5.053 14 C -0.070 4.070 15 C -0.145 4.145 16 C -0.159 4.159 17 O -0.337 6.337 18 Si 0.614 3.386 19 C -0.198 4.198 20 C -0.207 4.207 21 H 0.062 0.938 22 H 0.062 0.938 23 H 0.105 0.895 24 H 0.101 0.899 25 H 0.115 0.885 26 H 0.244 0.756 27 H 0.104 0.896 28 H 0.112 0.888 29 H 0.135 0.865 30 H 0.147 0.853 31 H 0.228 0.772 32 H -0.174 1.174 33 H -0.179 1.179 34 H 0.189 0.811 35 H 0.113 0.887 36 H 0.095 0.905 Dipole moment (debyes) X Y Z Total from point charges 1.167 -1.037 0.162 1.569 hybrid contribution 0.155 -0.754 -0.498 0.916 sum 1.322 -1.791 -0.336 2.251 Atomic orbital electron populations 1.22827 0.80799 1.03018 1.00138 1.87944 1.19966 1.26925 1.94564 1.23463 0.93744 0.85756 0.96521 0.88867 1.23629 0.95633 1.00469 0.98468 1.22243 0.80256 1.00633 0.94914 0.86038 1.45742 1.14555 1.14455 1.60961 1.16876 0.82696 0.84144 0.76935 1.90810 1.69734 1.23713 1.56025 1.21785 0.96349 0.91588 1.07939 1.73519 0.94074 1.25049 1.16755 1.45359 1.10198 1.09640 1.40120 1.22624 0.89225 0.89021 1.06084 1.21906 0.99215 0.86928 1.06451 1.24807 0.92090 0.97246 1.01771 1.86573 1.43990 1.51047 1.52073 0.94105 0.81675 0.83110 0.79692 1.21448 0.91430 1.01380 1.05528 1.24023 0.97426 1.01498 0.97798 0.93809 0.93848 0.89520 0.89865 0.88461 0.75583 0.89643 0.88787 0.86456 0.85292 0.77201 1.17368 1.17921 0.81054 0.88734 0.90459 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.01 10.85 101.05 1.10 1.08 16 2 O -0.38 -0.71 10.71 -35.23 -0.38 -1.08 16 3 C 0.06 0.01 4.31 -25.92 -0.11 -0.11 16 4 H 0.09 -0.12 7.87 -51.93 -0.41 -0.53 16 5 C -0.14 0.07 7.66 -25.91 -0.20 -0.13 16 6 C 0.12 0.08 4.24 -67.12 -0.28 -0.21 16 7 H 0.12 0.15 7.47 -51.93 -0.39 -0.23 16 8 N -0.71 -1.07 5.35 -54.00 -0.29 -1.36 16 9 C 0.61 2.37 7.82 -12.39 -0.10 2.28 16 10 O -0.53 -3.45 16.53 5.31 0.09 -3.36 16 11 C -0.02 -0.06 7.13 -82.76 -0.59 -0.65 16 12 N -0.26 -0.64 11.67 33.42 0.39 -0.25 16 13 N -0.26 -0.20 3.70 -63.85 -0.24 -0.44 16 14 C 0.07 -0.17 11.00 59.85 0.66 0.49 16 15 C -0.02 -0.01 6.18 -82.21 -0.51 -0.51 16 16 C -0.05 0.09 2.99 36.01 0.11 0.20 16 17 O -0.53 0.96 10.02 -35.23 -0.35 0.61 16 18 Si 0.72 -1.38 31.23 -169.99 -5.31 -6.69 16 19 C -0.17 -0.27 9.35 -39.36 -0.37 -0.64 16 20 C -0.17 -0.09 7.71 -25.92 -0.20 -0.29 16 21 H 0.04 -0.06 8.14 -51.93 -0.42 -0.48 16 22 H 0.04 -0.05 8.14 -51.93 -0.42 -0.47 16 23 H 0.09 -0.11 8.14 -51.93 -0.42 -0.53 16 24 H 0.08 -0.10 8.14 -51.93 -0.42 -0.53 16 25 H 0.10 -0.03 8.12 -51.93 -0.42 -0.45 16 26 H 0.41 0.13 8.45 -40.82 -0.35 -0.22 16 27 H 0.09 -0.25 8.14 -51.93 -0.42 -0.67 16 28 H 0.09 -0.30 8.14 -51.93 -0.42 -0.73 16 29 H 0.12 -0.43 5.01 -51.93 -0.26 -0.69 16 30 H 0.13 -0.36 7.96 -51.93 -0.41 -0.77 16 31 H 0.38 -1.61 8.39 45.56 0.38 -1.23 16 32 H -0.25 -0.18 7.11 56.52 0.40 0.22 16 33 H -0.26 -0.21 7.11 56.52 0.40 0.19 16 34 H 0.17 -0.05 7.02 -52.49 -0.37 -0.42 16 35 H 0.09 0.11 8.14 -51.93 -0.42 -0.31 16 36 H 0.08 0.04 8.14 -51.93 -0.42 -0.38 16 LS Contribution 308.10 15.07 4.64 4.64 Total: 0.00 -7.91 308.10 -6.74 -14.65 By element: Atomic # 1 Polarization: -3.42 SS G_CDS: -4.80 Total: -8.23 kcal Atomic # 6 Polarization: 2.01 SS G_CDS: -0.50 Total: 1.51 kcal Atomic # 7 Polarization: -1.91 SS G_CDS: -0.14 Total: -2.05 kcal Atomic # 8 Polarization: -3.20 SS G_CDS: -0.64 Total: -3.84 kcal Atomic # 14 Polarization: -1.38 SS G_CDS: -5.31 Total: -6.69 kcal Total LS contribution 4.64 Total: 4.64 kcal Total: -7.91 -6.74 -14.65 kcal The number of atoms in the molecule is 36 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_9984030_13259642.mol2 36 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 19.789 kcal (2) G-P(sol) polarization free energy of solvation -7.908 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 11.881 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.742 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -14.650 kcal (6) G-S(sol) free energy of system = (1) + (5) 5.139 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.40 seconds