Wall clock time and date at job start Tue Mar 9 2021 14:41:14 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50704 * 1 3 3 C 1.33699 * 122.40698 * 2 1 4 4 C 1.50701 * 125.02005 * 359.93798 * 3 2 1 5 5 O 1.42904 * 109.46987 * 315.24065 * 4 3 2 6 6 Si 1.86295 * 109.47169 * 195.24004 * 4 3 2 7 7 S 1.75828 * 109.96087 * 179.74977 * 3 2 1 8 8 C 1.75891 * 91.07010 * 0.29310 * 7 3 2 9 9 C 1.47055 * 125.33588 * 179.97438 * 8 7 3 10 10 N 1.31531 * 126.41772 * 179.73728 * 9 8 7 11 11 N 1.28658 * 109.22478 * 179.71892 * 10 9 8 12 12 C 1.30320 * 109.59088 * 0.41040 * 11 10 9 13 13 C 1.50700 * 126.16114 * 179.85301 * 12 11 10 14 14 H 1.08997 * 112.85332 * 190.88449 * 13 12 11 15 15 C 1.53781 * 113.61448 * 322.20167 * 13 12 11 16 16 C 1.53784 * 87.08394 * 139.97653 * 15 13 12 17 17 H 1.08998 * 113.69165 * 89.11967 * 16 15 13 18 18 N 1.46491 * 113.61695 * 220.01898 * 16 15 13 19 19 C 1.34786 * 119.99998 * 252.49643 * 18 16 15 20 20 O 1.21511 * 119.99367 * 359.97438 * 19 18 16 21 21 O 1.34638 * 119.99938 * 179.97438 * 19 18 16 22 22 C 1.45199 * 116.99363 * 180.02562 * 21 19 18 23 23 C 1.52993 * 109.47776 * 59.99697 * 22 21 19 24 24 C 1.52999 * 109.46904 * 299.99485 * 22 21 19 25 25 C 1.53000 * 109.46899 * 180.02562 * 22 21 19 26 26 C 1.53784 * 113.60877 * 59.69411 * 13 12 11 27 27 O 1.34544 * 107.67748 * 359.59884 * 12 11 10 28 28 C 1.36156 * 109.33320 * 359.70824 * 8 7 3 29 29 H 1.09001 * 109.46910 * 275.79487 * 1 2 3 30 30 H 1.09003 * 109.46447 * 35.79638 * 1 2 3 31 31 H 1.08998 * 109.47000 * 155.79320 * 1 2 3 32 32 H 1.08997 * 109.46937 * 75.24130 * 4 3 2 33 33 H 0.96701 * 113.99737 * 180.02562 * 5 4 3 34 34 H 1.48500 * 110.00326 * 298.68040 * 6 4 3 35 35 H 1.48500 * 110.00037 * 60.00070 * 6 4 3 36 36 H 1.08994 * 113.61941 * 25.42851 * 15 13 12 37 37 H 1.09002 * 113.60848 * 254.52199 * 15 13 12 38 38 H 0.96996 * 120.00440 * 72.49002 * 18 16 15 39 39 H 1.08998 * 109.47252 * 299.99935 * 23 22 21 40 40 H 1.09000 * 109.47366 * 179.97438 * 23 22 21 41 41 H 1.09007 * 109.46921 * 60.00145 * 23 22 21 42 42 H 1.09002 * 109.47200 * 180.02562 * 24 22 21 43 43 H 1.09004 * 109.47081 * 300.00206 * 24 22 21 44 44 H 1.08998 * 109.47560 * 60.00607 * 24 22 21 45 45 H 1.09009 * 109.47106 * 299.99976 * 25 22 21 46 46 H 1.09004 * 109.47603 * 59.99477 * 25 22 21 47 47 H 1.09000 * 109.47475 * 179.97438 * 25 22 21 48 48 H 1.09001 * 113.61429 * 105.46746 * 26 13 12 49 49 H 1.09000 * 113.69533 * 334.57761 * 26 13 12 50 50 H 1.08001 * 122.77602 * 180.19814 * 28 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2236 1.1288 0.0000 4 6 1.6451 2.5203 -0.0013 5 8 0.5797 2.5924 -0.9510 6 14 2.9719 3.7440 -0.4625 7 16 3.9405 0.7498 0.0072 8 6 3.5936 -0.9745 0.0010 9 6 4.6019 -2.0449 0.0024 10 7 4.3669 -3.3391 0.0027 11 7 5.4864 -3.9730 -0.0019 12 6 6.4716 -3.1199 0.0036 13 6 7.9403 -3.4576 0.0040 14 1 8.5736 -2.5921 0.1987 15 6 8.2899 -4.6848 0.8622 16 6 9.2717 -5.0859 -0.2515 17 1 10.2702 -4.6671 -0.1268 18 7 9.2885 -6.5242 -0.5290 19 6 10.3429 -7.2719 -0.1472 20 8 11.2797 -6.7528 0.4268 21 8 10.3582 -8.5939 -0.4018 22 6 11.5256 -9.3365 0.0384 23 6 11.6691 -9.2085 1.5562 24 6 12.7749 -8.7725 -0.6413 25 6 11.3634 -10.8110 -0.3365 26 6 8.3829 -4.2828 -1.2159 27 8 5.9413 -1.8834 0.0031 28 6 2.2452 -1.1630 0.0006 29 1 -0.3633 0.1038 1.0224 30 1 -0.3632 0.8336 -0.6011 31 1 -0.3633 -0.9373 -0.4214 32 1 1.2630 2.7559 0.9919 33 1 0.1599 3.4618 -1.0060 34 1 4.0711 3.7015 0.5351 35 1 3.5012 3.4337 -1.8149 36 1 7.4612 -5.3819 0.9856 37 1 8.7774 -4.4341 1.8044 38 1 8.5408 -6.9385 -0.9874 39 1 11.7849 -8.1580 1.8230 40 1 12.5453 -9.7663 1.8868 41 1 10.7790 -9.6104 2.0405 42 1 13.6514 -9.3302 -0.3111 43 1 12.6728 -8.8638 -1.7227 44 1 12.8908 -7.7220 -0.3746 45 1 10.4732 -11.2131 0.1474 46 1 11.2615 -10.9019 -1.4179 47 1 12.2400 -11.3684 -0.0064 48 1 8.9452 -3.7076 -1.9514 49 1 7.5804 -4.8704 -1.6618 50 1 1.7918 -2.1433 0.0002 There are 70 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 70 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV m_271722_14472206_10193972.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 14:41:14 Heat of formation + Delta-G solvation = -8.241940 kcal Electronic energy + Delta-G solvation = -33273.977198 eV Core-core repulsion = 28591.072132 eV Total energy + Delta-G solvation = -4682.905066 eV No. of doubly occupied orbitals = 70 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 394.144 amu Computer time = 1.12 seconds Orbital eigenvalues (eV) -45.19692 -41.81297 -40.46398 -39.92583 -37.87772 -37.68247 -37.21713 -35.34554 -34.44789 -33.62303 -31.07058 -30.13755 -28.30453 -28.26794 -27.61301 -27.06701 -26.28826 -24.81957 -24.20287 -22.98330 -22.68504 -21.40002 -20.69621 -19.90315 -19.10216 -19.04742 -18.63824 -18.43373 -18.22286 -17.41376 -17.08714 -17.03827 -16.76783 -16.43122 -16.03692 -15.54402 -15.33167 -15.14226 -14.98132 -14.90272 -14.61949 -14.48342 -14.34853 -14.15215 -13.79474 -13.48665 -13.41403 -13.32938 -13.27525 -13.09661 -13.07751 -12.94379 -12.84962 -12.80606 -12.80550 -12.67517 -12.56701 -12.33453 -12.23185 -12.17214 -12.11886 -12.04285 -11.87275 -11.27873 -11.07668 -10.95711 -10.53659 -10.21502 -9.62947 -9.38837 -5.37182 -0.96079 0.09678 0.32068 0.50901 0.92070 1.00530 1.21550 1.25185 1.43460 1.68561 1.77840 1.86871 2.57895 2.99102 3.11642 3.17710 3.20285 3.39932 3.52941 3.56877 3.57766 3.79746 3.83969 3.85546 3.99402 4.07559 4.15607 4.22488 4.27047 4.32127 4.38547 4.47610 4.52380 4.54186 4.58419 4.60350 4.65221 4.66778 4.73960 4.75425 4.80437 4.80845 4.87774 4.95212 4.96349 4.98562 5.11204 5.28959 5.31177 5.38341 5.43923 5.47430 5.61412 6.40273 6.41057 7.18635 7.42333 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.105 4.105 2 C -0.071 4.071 3 C -0.166 4.166 4 C -0.032 4.032 5 O -0.537 6.537 6 Si 0.671 3.329 7 S 0.154 5.846 8 C -0.142 4.142 9 C 0.239 3.761 10 N -0.262 5.262 11 N -0.274 5.274 12 C 0.181 3.819 13 C -0.022 4.022 14 H 0.131 0.869 15 C -0.137 4.137 16 C 0.147 3.853 17 H 0.129 0.871 18 N -0.700 5.700 19 C 0.652 3.348 20 O -0.566 6.566 21 O -0.364 6.364 22 C 0.137 3.863 23 C -0.184 4.184 24 C -0.184 4.184 25 C -0.142 4.142 26 C -0.131 4.131 27 O -0.220 6.220 28 C -0.055 4.055 29 H 0.071 0.929 30 H 0.098 0.902 31 H 0.067 0.933 32 H 0.089 0.911 33 H 0.386 0.614 34 H -0.237 1.237 35 H -0.237 1.237 36 H 0.106 0.894 37 H 0.090 0.910 38 H 0.410 0.590 39 H 0.087 0.913 40 H 0.072 0.928 41 H 0.060 0.940 42 H 0.072 0.928 43 H 0.060 0.940 44 H 0.087 0.913 45 H 0.067 0.933 46 H 0.067 0.933 47 H 0.082 0.918 48 H 0.094 0.906 49 H 0.102 0.898 50 H 0.161 0.839 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.051 5.095 -0.247 5.498 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.163 4.163 2 C -0.083 4.083 3 C -0.285 4.285 4 C -0.145 4.145 5 O -0.345 6.345 6 Si 0.570 3.430 7 S 0.421 5.579 8 C -0.260 4.260 9 C 0.031 3.969 10 N -0.111 5.111 11 N -0.121 5.121 12 C -0.029 4.029 13 C -0.043 4.043 14 H 0.149 0.851 15 C -0.176 4.176 16 C 0.043 3.957 17 H 0.147 0.853 18 N -0.358 5.358 19 C 0.406 3.594 20 O -0.455 6.455 21 O -0.278 6.278 22 C 0.100 3.900 23 C -0.241 4.241 24 C -0.241 4.241 25 C -0.199 4.199 26 C -0.169 4.169 27 O -0.100 6.100 28 C -0.089 4.089 29 H 0.089 0.911 30 H 0.116 0.884 31 H 0.086 0.914 32 H 0.107 0.893 33 H 0.235 0.765 34 H -0.161 1.161 35 H -0.160 1.160 36 H 0.124 0.876 37 H 0.109 0.891 38 H 0.245 0.755 39 H 0.106 0.894 40 H 0.091 0.909 41 H 0.079 0.921 42 H 0.091 0.909 43 H 0.079 0.921 44 H 0.106 0.894 45 H 0.086 0.914 46 H 0.086 0.914 47 H 0.101 0.899 48 H 0.112 0.888 49 H 0.121 0.879 50 H 0.178 0.822 Dipole moment (debyes) X Y Z Total from point charges 0.259 4.481 -0.263 4.496 hybrid contribution -1.075 -0.357 0.080 1.136 sum -0.816 4.123 -0.182 4.207 Atomic orbital electron populations 1.20768 0.88089 1.04369 1.03108 1.18701 0.98579 0.90018 1.00994 1.23785 0.95523 0.98229 1.10914 1.23934 0.97968 0.96451 0.96141 1.86447 1.49790 1.37700 1.60534 0.94875 0.78707 0.86903 0.82506 1.84442 1.04354 0.97226 1.71925 1.21260 0.93186 0.93710 1.17847 1.23992 0.79175 0.93130 1.00594 1.74944 1.18648 1.00485 1.17001 1.74321 0.93812 1.27082 1.16860 1.27716 0.99061 0.76724 0.99387 1.21033 0.82802 0.99704 1.00712 0.85146 1.23694 1.00282 0.94915 0.98707 1.22350 1.00197 0.78114 0.95062 0.85302 1.44649 1.20720 1.07756 1.62712 1.18134 0.82654 0.80927 0.77692 1.90914 1.35843 1.73098 1.45651 1.86318 1.46115 1.19163 1.76235 1.22123 0.82432 0.90650 0.94791 1.22521 1.02643 1.05199 0.93763 1.22525 0.96612 1.04278 1.00703 1.21883 1.03363 0.91801 1.02892 1.23550 0.99937 0.97386 0.96075 1.84905 1.20610 1.34366 1.70097 1.20607 0.89961 1.00751 0.97610 0.91079 0.88387 0.91374 0.89313 0.76486 1.16147 1.16025 0.87567 0.89143 0.75456 0.89416 0.90938 0.92092 0.90933 0.92115 0.89426 0.91362 0.91386 0.89932 0.88766 0.87922 0.82188 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.10 0.03 9.75 36.01 0.35 0.38 16 2 C -0.07 -0.11 5.75 -106.39 -0.61 -0.72 16 3 C -0.17 -0.24 5.80 -35.90 -0.21 -0.44 16 4 C -0.03 0.05 2.71 36.01 0.10 0.15 16 5 O -0.54 1.16 10.20 -35.23 -0.36 0.80 16 6 Si 0.67 -1.33 31.07 -169.99 -5.28 -6.61 16 7 S 0.15 0.38 20.68 -107.50 -2.22 -1.85 16 8 C -0.14 -0.49 6.46 -36.76 -0.24 -0.73 16 9 C 0.24 1.12 8.24 -14.11 -0.12 1.01 16 10 N -0.26 -1.52 12.23 31.95 0.39 -1.12 16 11 N -0.27 -1.28 11.82 32.59 0.39 -0.90 16 12 C 0.18 0.46 7.53 -12.92 -0.10 0.37 16 13 C -0.02 0.03 4.29 -90.96 -0.39 -0.36 16 14 H 0.13 -0.42 8.14 -51.93 -0.42 -0.84 16 15 C -0.14 0.15 7.42 -25.92 -0.19 -0.04 16 16 C 0.15 -0.19 4.24 -67.12 -0.28 -0.48 16 17 H 0.13 -0.13 7.46 -51.93 -0.39 -0.51 16 18 N -0.70 0.03 5.36 -57.93 -0.31 -0.28 16 19 C 0.65 1.79 8.06 54.06 0.44 2.22 16 20 O -0.57 -2.70 11.48 -19.28 -0.22 -2.92 16 21 O -0.36 -0.96 9.94 -40.32 -0.40 -1.36 16 22 C 0.14 0.21 1.13 -90.62 -0.10 0.10 16 23 C -0.18 -0.28 8.37 37.15 0.31 0.03 16 24 C -0.18 -0.26 8.37 37.16 0.31 0.06 16 25 C -0.14 0.06 8.85 37.16 0.33 0.39 16 26 C -0.13 0.29 7.38 -25.91 -0.19 0.10 16 27 O -0.22 -0.86 10.90 3.35 0.04 -0.82 16 28 C -0.05 -0.13 9.89 -40.51 -0.40 -0.53 16 29 H 0.07 -0.08 8.14 -51.93 -0.42 -0.50 16 30 H 0.10 -0.02 5.52 -51.93 -0.29 -0.31 16 31 H 0.07 -0.06 8.10 -51.93 -0.42 -0.48 16 32 H 0.09 -0.31 7.96 -51.93 -0.41 -0.72 16 33 H 0.39 -2.75 8.74 45.56 0.40 -2.35 16 34 H -0.24 -0.05 7.11 56.52 0.40 0.35 16 35 H -0.24 -0.34 7.11 56.52 0.40 0.06 16 36 H 0.11 0.01 7.78 -51.93 -0.40 -0.39 16 37 H 0.09 -0.13 8.14 -51.93 -0.42 -0.55 16 38 H 0.41 -0.63 8.84 -40.82 -0.36 -0.99 16 39 H 0.09 0.31 5.88 -51.93 -0.31 0.00 16 40 H 0.07 0.01 8.14 -51.93 -0.42 -0.41 16 41 H 0.06 0.08 8.14 -51.92 -0.42 -0.34 16 42 H 0.07 0.00 8.14 -51.93 -0.42 -0.42 16 43 H 0.06 0.07 8.14 -51.93 -0.42 -0.35 16 44 H 0.09 0.29 5.88 -51.93 -0.31 -0.01 16 45 H 0.07 -0.03 8.14 -51.92 -0.42 -0.45 16 46 H 0.07 -0.03 8.14 -51.93 -0.42 -0.46 16 47 H 0.08 -0.14 8.14 -51.93 -0.42 -0.57 16 48 H 0.09 -0.32 8.14 -51.93 -0.42 -0.74 16 49 H 0.10 -0.17 8.07 -51.93 -0.42 -0.59 16 50 H 0.16 0.20 8.06 -52.49 -0.42 -0.22 16 LS Contribution 423.98 15.07 6.39 6.39 Total: 0.00 -9.19 423.98 -9.77 -18.96 By element: Atomic # 1 Polarization: -4.60 SS G_CDS: -7.18 Total: -11.78 kcal Atomic # 6 Polarization: 2.49 SS G_CDS: -1.00 Total: 1.49 kcal Atomic # 7 Polarization: -2.77 SS G_CDS: 0.47 Total: -2.30 kcal Atomic # 8 Polarization: -3.36 SS G_CDS: -0.94 Total: -4.30 kcal Atomic # 14 Polarization: -1.33 SS G_CDS: -5.28 Total: -6.61 kcal Atomic # 16 Polarization: 0.38 SS G_CDS: -2.22 Total: -1.85 kcal Total LS contribution 6.39 Total: 6.39 kcal Total: -9.19 -9.77 -18.96 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_271722_14472206_10193972.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 10.717 kcal (2) G-P(sol) polarization free energy of solvation -9.192 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 1.524 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.766 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.959 kcal (6) G-S(sol) free energy of system = (1) + (5) -8.242 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.12 seconds