Wall clock time and date at job start Tue Mar 9 2021 14:41:21 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50702 * 1 3 3 C 1.33703 * 122.40843 * 2 1 4 4 C 1.50703 * 125.01886 * 0.04226 * 3 2 1 5 5 O 1.42905 * 109.46987 * 44.76510 * 4 3 2 6 6 Si 1.86294 * 109.47165 * 164.76468 * 4 3 2 7 7 S 1.75825 * 109.96448 * 180.02562 * 3 2 1 8 8 C 1.75900 * 91.06898 * 359.97438 * 7 3 2 9 9 C 1.47045 * 125.33514 * 180.02562 * 8 7 3 10 10 N 1.31534 * 126.41560 * 180.02562 * 9 8 7 11 11 N 1.28658 * 109.22671 * 179.97438 * 10 9 8 12 12 C 1.30319 * 109.58948 * 0.02562 * 11 10 9 13 13 C 1.50703 * 126.16087 * 180.02562 * 12 11 10 14 14 H 1.09003 * 112.84969 * 168.82308 * 13 12 11 15 15 C 1.53775 * 113.61334 * 300.02168 * 13 12 11 16 16 C 1.53780 * 87.08264 * 89.20130 * 15 13 12 17 17 H 1.08998 * 113.61185 * 270.79892 * 16 15 13 18 18 N 1.46501 * 113.61742 * 139.98250 * 16 15 13 19 19 C 1.34772 * 119.99941 * 156.25084 * 18 16 15 20 20 O 1.21505 * 120.00475 * 0.27411 * 19 18 16 21 21 O 1.34647 * 119.99632 * 180.27411 * 19 18 16 22 22 C 1.45202 * 116.99769 * 180.02562 * 21 19 18 23 23 C 1.52998 * 109.47167 * 59.99971 * 22 21 19 24 24 C 1.53002 * 109.47015 * 179.97438 * 22 21 19 25 25 C 1.52996 * 109.47240 * 300.00132 * 22 21 19 26 26 C 1.53777 * 87.17541 * 25.38943 * 16 15 13 27 27 O 1.34545 * 107.67975 * 0.25917 * 12 11 10 28 28 C 1.36152 * 109.32959 * 0.26845 * 8 7 3 29 29 H 1.08997 * 109.47103 * 84.22379 * 1 2 3 30 30 H 1.08996 * 109.46921 * 204.22427 * 1 2 3 31 31 H 1.08997 * 109.46477 * 324.22630 * 1 2 3 32 32 H 1.09000 * 109.47137 * 284.76973 * 4 3 2 33 33 H 0.96701 * 114.00006 * 179.97438 * 5 4 3 34 34 H 1.48500 * 110.00446 * 300.00176 * 6 4 3 35 35 H 1.48507 * 110.00060 * 61.32064 * 6 4 3 36 36 H 1.09003 * 113.61879 * 334.64778 * 15 13 12 37 37 H 1.09005 * 113.61699 * 203.74605 * 15 13 12 38 38 H 0.96998 * 119.99666 * 336.52971 * 18 16 15 39 39 H 1.09006 * 109.46732 * 59.99843 * 23 22 21 40 40 H 1.08993 * 109.47434 * 179.97438 * 23 22 21 41 41 H 1.09005 * 109.47565 * 300.00256 * 23 22 21 42 42 H 1.09001 * 109.46300 * 60.00507 * 24 22 21 43 43 H 1.08998 * 109.46699 * 179.97438 * 24 22 21 44 44 H 1.08992 * 109.47471 * 300.00510 * 24 22 21 45 45 H 1.09002 * 109.47153 * 59.99851 * 25 22 21 46 46 H 1.08998 * 109.47730 * 179.97438 * 25 22 21 47 47 H 1.09004 * 109.47126 * 300.00426 * 25 22 21 48 48 H 1.09006 * 113.61387 * 89.15716 * 26 16 15 49 49 H 1.08993 * 113.61929 * 220.06573 * 26 16 15 50 50 H 1.08001 * 122.77703 * 179.73444 * 28 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2236 1.1288 0.0000 4 6 1.6451 2.5204 0.0009 5 8 0.5795 2.5926 0.9504 6 14 2.9719 3.7441 0.4621 7 16 3.9405 0.7499 -0.0007 8 6 3.5936 -0.9745 -0.0002 9 6 4.6019 -2.0449 0.0000 10 7 4.3668 -3.3390 -0.0001 11 7 5.4864 -3.9730 -0.0003 12 6 6.4716 -3.1199 0.0002 13 6 7.9403 -3.4576 -0.0004 14 1 8.5736 -2.5920 -0.1945 15 6 8.3828 -4.2837 1.2188 16 6 8.0421 -5.5366 0.3948 17 1 7.0078 -5.8628 0.5037 18 7 9.0037 -6.6290 0.5628 19 6 8.6282 -7.9005 0.3209 20 8 7.4935 -8.1405 -0.0413 21 8 9.5105 -8.9050 0.4806 22 6 9.0369 -10.2490 0.2015 23 6 8.5753 -10.3349 -1.2546 24 6 10.1713 -11.2485 0.4362 25 6 7.8653 -10.5796 1.1283 26 6 8.2904 -4.6851 -0.8614 27 8 5.9413 -1.8834 0.0066 28 6 2.2452 -1.1630 -0.0056 29 1 -0.3633 0.1034 -1.0224 30 1 -0.3633 -0.9372 0.4217 31 1 -0.3632 0.8338 0.6008 32 1 1.2631 2.7557 -0.9925 33 1 0.1597 3.4620 1.0051 34 1 3.5009 3.4341 1.8146 35 1 4.0713 3.7014 -0.5353 36 1 7.7452 -4.1489 2.0925 37 1 9.4439 -4.1880 1.4492 38 1 9.9096 -6.4375 0.8520 39 1 9.4100 -10.0993 -1.9148 40 1 8.2202 -11.3438 -1.4643 41 1 7.7672 -9.6228 -1.4223 42 1 10.5004 -11.1873 1.4736 43 1 9.8156 -12.2573 0.2272 44 1 11.0057 -11.0128 -0.2242 45 1 7.0572 -9.8675 0.9606 46 1 7.5094 -11.5883 0.9185 47 1 8.1941 -10.5183 2.1657 48 1 9.3262 -4.6992 -1.2007 49 1 7.5782 -4.8736 -1.6646 50 1 1.7918 -2.1432 -0.0106 There are 70 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 70 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV m_271722_14937844_10193972.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 14:41:21 Heat of formation + Delta-G solvation = -4.902368 kcal Electronic energy + Delta-G solvation = -33710.921029 eV Core-core repulsion = 29028.160778 eV Total energy + Delta-G solvation = -4682.760251 eV No. of doubly occupied orbitals = 70 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 394.144 amu Computer time = 1.13 seconds Orbital eigenvalues (eV) -45.20694 -41.75123 -40.46344 -39.91201 -37.82138 -37.66919 -37.20102 -35.29522 -34.38533 -33.57560 -30.91667 -30.11916 -28.27088 -28.21936 -27.46238 -27.06517 -26.40212 -24.78782 -24.24047 -23.06779 -22.70790 -21.30872 -20.68438 -19.87660 -19.05950 -19.00133 -18.55468 -18.42344 -18.10498 -17.43939 -17.03563 -17.00022 -16.59699 -16.53883 -16.01887 -15.54362 -15.29219 -15.13686 -14.89507 -14.73837 -14.60041 -14.48128 -14.36690 -14.07307 -13.85131 -13.49155 -13.39885 -13.32479 -13.20152 -13.18738 -13.06701 -13.04546 -12.88840 -12.78130 -12.76084 -12.64877 -12.45605 -12.23209 -12.17090 -12.15912 -12.05194 -11.95315 -11.72126 -11.22543 -11.09327 -10.87832 -10.53041 -10.14851 -9.61722 -9.38233 -5.36746 -0.95163 0.10642 0.32617 0.51785 0.93838 1.01392 1.23073 1.25912 1.43978 1.70247 1.78314 1.95315 2.57136 2.99770 3.12849 3.18116 3.20430 3.42243 3.56747 3.58679 3.72423 3.84257 3.88144 3.89574 4.03552 4.11621 4.16534 4.26294 4.30216 4.35598 4.39188 4.40694 4.55557 4.59522 4.61650 4.63617 4.68613 4.69029 4.75893 4.80544 4.82240 4.84053 4.91001 4.98001 4.99955 5.04135 5.13994 5.32622 5.34921 5.44008 5.45311 5.54095 5.66813 6.41147 6.47722 7.20623 7.50792 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.105 4.105 2 C -0.071 4.071 3 C -0.166 4.166 4 C -0.032 4.032 5 O -0.537 6.537 6 Si 0.671 3.329 7 S 0.153 5.847 8 C -0.142 4.142 9 C 0.240 3.760 10 N -0.260 5.260 11 N -0.266 5.266 12 C 0.181 3.819 13 C -0.024 4.024 14 H 0.122 0.878 15 C -0.130 4.130 16 C 0.141 3.859 17 H 0.136 0.864 18 N -0.703 5.703 19 C 0.649 3.351 20 O -0.559 6.559 21 O -0.366 6.366 22 C 0.137 3.863 23 C -0.184 4.184 24 C -0.141 4.141 25 C -0.185 4.185 26 C -0.134 4.134 27 O -0.218 6.218 28 C -0.054 4.054 29 H 0.071 0.929 30 H 0.068 0.932 31 H 0.098 0.902 32 H 0.089 0.911 33 H 0.386 0.614 34 H -0.237 1.237 35 H -0.237 1.237 36 H 0.086 0.914 37 H 0.111 0.889 38 H 0.406 0.594 39 H 0.059 0.941 40 H 0.071 0.929 41 H 0.088 0.912 42 H 0.067 0.933 43 H 0.082 0.918 44 H 0.067 0.933 45 H 0.088 0.912 46 H 0.072 0.928 47 H 0.060 0.940 48 H 0.107 0.893 49 H 0.087 0.913 50 H 0.161 0.839 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.481 6.530 -0.166 6.698 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.163 4.163 2 C -0.083 4.083 3 C -0.284 4.284 4 C -0.145 4.145 5 O -0.345 6.345 6 Si 0.570 3.430 7 S 0.420 5.580 8 C -0.260 4.260 9 C 0.032 3.968 10 N -0.109 5.109 11 N -0.113 5.113 12 C -0.029 4.029 13 C -0.044 4.044 14 H 0.141 0.859 15 C -0.169 4.169 16 C 0.037 3.963 17 H 0.154 0.846 18 N -0.361 5.361 19 C 0.402 3.598 20 O -0.447 6.447 21 O -0.281 6.281 22 C 0.100 3.900 23 C -0.241 4.241 24 C -0.199 4.199 25 C -0.242 4.242 26 C -0.173 4.173 27 O -0.098 6.098 28 C -0.089 4.089 29 H 0.089 0.911 30 H 0.086 0.914 31 H 0.116 0.884 32 H 0.107 0.893 33 H 0.235 0.765 34 H -0.160 1.160 35 H -0.162 1.162 36 H 0.105 0.895 37 H 0.129 0.871 38 H 0.241 0.759 39 H 0.078 0.922 40 H 0.090 0.910 41 H 0.106 0.894 42 H 0.086 0.914 43 H 0.100 0.900 44 H 0.086 0.914 45 H 0.107 0.893 46 H 0.091 0.909 47 H 0.079 0.921 48 H 0.126 0.874 49 H 0.106 0.894 50 H 0.179 0.821 Dipole moment (debyes) X Y Z Total from point charges 2.693 5.521 -0.037 6.142 hybrid contribution -0.299 -0.092 -0.146 0.345 sum 2.394 5.429 -0.183 5.936 Atomic orbital electron populations 1.20768 0.88083 1.04384 1.03112 1.18703 0.98583 0.90011 1.00962 1.23785 0.95512 0.98222 1.10930 1.23938 0.97962 0.96454 0.96145 1.86449 1.49777 1.37696 1.60547 0.94882 0.78704 0.86903 0.82497 1.84423 1.04379 0.97240 1.71990 1.21249 0.93168 0.93668 1.17887 1.24007 0.79072 0.93176 1.00515 1.74977 1.18664 1.00402 1.16854 1.74404 0.93784 1.26878 1.16256 1.27303 0.98699 0.76871 1.00022 1.20422 0.83077 1.00207 1.00743 0.85948 1.23491 1.03465 0.93261 0.96670 1.22763 0.95327 0.83381 0.94844 0.84629 1.44709 1.15970 1.03174 1.72260 1.18167 0.83059 0.81795 0.76734 1.90948 1.19527 1.83372 1.50873 1.86302 1.42685 1.16575 1.82500 1.22110 0.95032 0.76931 0.95911 1.22523 1.03185 1.04132 0.94299 1.21874 0.97430 0.97366 1.03184 1.22526 0.98993 1.03640 0.99019 1.23641 1.03746 0.91719 0.98243 1.84882 1.20669 1.34098 1.70170 1.20617 0.89962 1.00788 0.97496 0.91073 0.91351 0.88389 0.89313 0.76496 1.16021 1.16151 0.89539 0.87096 0.75864 0.92164 0.90961 0.89355 0.91429 0.89961 0.91427 0.89346 0.90948 0.92143 0.87427 0.89442 0.82140 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.10 0.01 9.75 36.01 0.35 0.36 16 2 C -0.07 -0.13 5.75 -106.39 -0.61 -0.74 16 3 C -0.17 -0.26 5.80 -35.90 -0.21 -0.47 16 4 C -0.03 0.05 2.71 36.01 0.10 0.14 16 5 O -0.54 1.09 10.20 -35.23 -0.36 0.73 16 6 Si 0.67 -1.30 31.06 -169.99 -5.28 -6.58 16 7 S 0.15 0.39 20.67 -107.50 -2.22 -1.83 16 8 C -0.14 -0.53 6.46 -36.76 -0.24 -0.76 16 9 C 0.24 1.21 8.24 -14.11 -0.12 1.09 16 10 N -0.26 -1.67 12.23 31.95 0.39 -1.27 16 11 N -0.27 -1.47 10.93 32.59 0.36 -1.12 16 12 C 0.18 0.55 7.41 -12.92 -0.10 0.45 16 13 C -0.02 0.03 4.49 -90.87 -0.41 -0.38 16 14 H 0.12 -0.41 8.14 -51.93 -0.42 -0.83 16 15 C -0.13 0.27 7.41 -25.92 -0.19 0.08 16 16 C 0.14 0.06 3.83 -67.12 -0.26 -0.20 16 17 H 0.14 0.50 6.59 -51.93 -0.34 0.15 16 18 N -0.70 -0.24 5.37 -57.93 -0.31 -0.55 16 19 C 0.65 2.34 8.06 54.05 0.44 2.78 16 20 O -0.56 -3.60 11.50 -19.27 -0.22 -3.83 16 21 O -0.37 -1.09 9.94 -40.34 -0.40 -1.49 16 22 C 0.14 0.28 1.13 -90.62 -0.10 0.18 16 23 C -0.18 -0.39 8.37 37.16 0.31 -0.08 16 24 C -0.14 0.02 8.85 37.16 0.33 0.35 16 25 C -0.18 -0.42 8.37 37.16 0.31 -0.10 16 26 C -0.13 0.12 7.40 -25.83 -0.19 -0.07 16 27 O -0.22 -0.90 10.90 3.34 0.04 -0.86 16 28 C -0.05 -0.14 9.89 -40.51 -0.40 -0.54 16 29 H 0.07 -0.07 8.14 -51.93 -0.42 -0.49 16 30 H 0.07 -0.04 8.10 -51.93 -0.42 -0.46 16 31 H 0.10 0.00 5.52 -51.93 -0.29 -0.29 16 32 H 0.09 -0.30 7.96 -51.93 -0.41 -0.71 16 33 H 0.39 -2.71 8.74 45.56 0.40 -2.31 16 34 H -0.24 -0.35 7.11 56.52 0.40 0.05 16 35 H -0.24 -0.06 7.11 56.52 0.40 0.34 16 36 H 0.09 -0.09 8.09 -51.93 -0.42 -0.51 16 37 H 0.11 -0.53 8.11 -51.93 -0.42 -0.95 16 38 H 0.41 -0.97 8.82 -40.82 -0.36 -1.33 16 39 H 0.06 0.10 8.14 -51.93 -0.42 -0.32 16 40 H 0.07 0.05 8.14 -51.93 -0.42 -0.37 16 41 H 0.09 0.39 5.88 -51.93 -0.31 0.09 16 42 H 0.07 -0.02 8.14 -51.93 -0.42 -0.44 16 43 H 0.08 -0.12 8.14 -51.93 -0.42 -0.54 16 44 H 0.07 -0.03 8.14 -51.93 -0.42 -0.45 16 45 H 0.09 0.41 5.88 -51.93 -0.31 0.10 16 46 H 0.07 0.06 8.14 -51.93 -0.42 -0.36 16 47 H 0.06 0.11 8.14 -51.93 -0.42 -0.31 16 48 H 0.11 -0.32 8.14 -51.93 -0.42 -0.74 16 49 H 0.09 0.09 8.10 -51.93 -0.42 -0.33 16 50 H 0.16 0.26 8.06 -52.49 -0.42 -0.16 16 LS Contribution 422.22 15.07 6.36 6.36 Total: 0.00 -9.73 422.22 -9.78 -19.51 By element: Atomic # 1 Polarization: -4.01 SS G_CDS: -7.15 Total: -11.16 kcal Atomic # 6 Polarization: 3.06 SS G_CDS: -0.99 Total: 2.08 kcal Atomic # 7 Polarization: -3.38 SS G_CDS: 0.44 Total: -2.94 kcal Atomic # 8 Polarization: -4.50 SS G_CDS: -0.95 Total: -5.45 kcal Atomic # 14 Polarization: -1.30 SS G_CDS: -5.28 Total: -6.58 kcal Atomic # 16 Polarization: 0.39 SS G_CDS: -2.22 Total: -1.83 kcal Total LS contribution 6.36 Total: 6.36 kcal Total: -9.73 -9.78 -19.51 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_271722_14937844_10193972.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 14.611 kcal (2) G-P(sol) polarization free energy of solvation -9.733 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 4.878 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.780 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.513 kcal (6) G-S(sol) free energy of system = (1) + (5) -4.902 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.13 seconds