Wall clock time and date at job start Tue Mar 9 2021 13:01:38 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52998 * 1 3 3 O 1.42893 * 112.85536 * 2 1 4 4 C 1.53788 * 113.61034 * 131.19792 * 2 1 3 5 5 C 1.53784 * 87.08076 * 89.19695 * 4 2 1 6 6 H 1.08994 * 113.61446 * 270.79438 * 5 4 2 7 7 N 1.46498 * 113.61413 * 139.97716 * 5 4 2 8 8 C 1.39007 * 120.00216 * 154.99964 * 7 5 4 9 9 N 1.32400 * 119.70598 * 179.97438 * 8 7 5 10 10 C 1.31974 * 121.61583 * 179.70538 * 9 8 7 11 11 C 1.38018 * 120.85660 * 0.58171 * 10 9 8 12 12 C 1.50707 * 120.33118 * 179.73259 * 11 10 9 13 13 O 1.42903 * 109.46442 * 244.71842 * 12 11 10 14 14 Si 1.86293 * 109.47256 * 4.71408 * 12 11 10 15 15 C 1.38878 * 119.33155 * 359.45166 * 11 10 9 16 16 C 1.38298 * 118.50761 * 0.25438 * 15 11 10 17 17 C 1.53782 * 87.08242 * 25.43178 * 5 4 2 18 18 H 1.09003 * 109.46922 * 288.80485 * 1 2 3 19 19 H 1.08995 * 109.47206 * 48.80003 * 1 2 3 20 20 H 1.09001 * 109.47992 * 168.80542 * 1 2 3 21 21 H 0.96700 * 113.99450 * 311.20166 * 3 2 1 22 22 H 1.08995 * 113.61357 * 334.64924 * 4 2 1 23 23 H 1.09001 * 113.68647 * 203.75412 * 4 2 1 24 24 H 0.97006 * 120.00357 * 335.00229 * 7 5 4 25 25 H 1.07997 * 119.56767 * 180.28378 * 10 9 8 26 26 H 1.08999 * 109.47345 * 124.71912 * 12 11 10 27 27 H 0.96700 * 114.00311 * 60.00230 * 13 12 11 28 28 H 1.48501 * 109.99918 * 58.68485 * 14 12 11 29 29 H 1.48506 * 109.99973 * 180.02562 * 14 12 11 30 30 H 1.08008 * 120.74548 * 180.23618 * 15 11 10 31 31 H 1.08002 * 120.45202 * 179.97438 * 16 15 11 32 32 H 1.08997 * 113.61785 * 89.11808 * 17 5 4 33 33 H 1.09005 * 113.61002 * 220.02039 * 17 5 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0850 1.3167 0.0000 4 6 2.1459 -0.9281 1.0603 5 6 2.0948 -2.0421 0.0013 6 1 1.1599 -2.6023 0.0017 7 7 3.2767 -2.9077 0.0026 8 6 3.1868 -4.2075 -0.4818 9 7 4.2588 -4.9846 -0.4783 10 6 4.2147 -6.2261 -0.9238 11 6 3.0432 -6.7577 -1.4236 12 6 3.0078 -8.1750 -1.9348 13 8 2.7349 -8.1686 -3.3375 14 14 4.6554 -8.9878 -1.6264 15 6 1.8960 -5.9753 -1.4453 16 6 1.9712 -4.6801 -0.9663 17 6 2.1478 -0.9289 -1.0585 18 1 -0.3633 0.3313 0.9728 19 1 -0.3633 0.6769 -0.7732 20 1 -0.3635 -1.0081 -0.1995 21 1 1.7015 1.9051 -0.6647 22 1 1.4938 -1.1080 1.9149 23 1 3.1585 -0.6489 1.3517 24 1 4.1221 -2.5739 0.3416 25 1 5.1082 -6.8324 -0.9013 26 1 2.2262 -8.7293 -1.4151 27 1 3.3913 -7.6918 -3.8638 28 1 4.9656 -8.9722 -0.1742 29 1 4.6337 -10.3859 -2.1266 30 1 0.9660 -6.3695 -1.8278 31 1 1.0983 -4.0440 -0.9688 32 1 3.1608 -0.6489 -1.3473 33 1 1.4972 -1.1095 -1.9142 There are 43 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 43 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_27_11245584_13915762.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:01:38 Heat of formation + Delta-G solvation = -9.001731 kcal Electronic energy + Delta-G solvation = -16620.074336 eV Core-core repulsion = 13841.367029 eV Total energy + Delta-G solvation = -2778.707308 eV No. of doubly occupied orbitals = 43 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 237.115 amu Computer time = 0.32 seconds Orbital eigenvalues (eV) -41.61335 -40.69401 -37.98764 -36.74795 -34.74946 -33.38359 -31.37694 -29.42753 -26.89401 -26.44171 -24.97852 -23.89813 -22.35208 -20.20351 -18.94210 -18.43355 -18.02291 -17.20816 -16.53441 -16.30754 -16.19803 -15.99957 -15.41870 -15.19444 -14.85221 -14.34560 -14.22046 -14.04424 -13.84948 -13.40349 -13.10062 -12.74677 -12.68471 -12.39714 -12.21378 -12.06039 -11.62378 -11.08107 -10.79678 -10.74533 -10.44210 -10.38771 -8.71511 -4.99230 0.20866 0.38596 1.34028 1.64117 1.97138 2.05519 2.79767 3.22977 3.41883 3.53444 3.56050 3.61110 3.72030 3.77908 3.78757 3.99375 4.06332 4.26164 4.34841 4.49213 4.53650 4.67707 4.74137 4.78580 4.79660 4.93924 4.97781 5.02787 5.12491 5.27092 5.32558 5.53663 6.00351 6.49867 6.79505 6.83960 7.11839 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.162 4.162 2 C 0.104 3.896 3 O -0.573 6.573 4 C -0.135 4.135 5 C 0.137 3.863 6 H 0.127 0.873 7 N -0.709 5.709 8 C 0.394 3.606 9 N -0.567 5.567 10 C 0.147 3.853 11 C -0.237 4.237 12 C -0.053 4.053 13 O -0.556 6.556 14 Si 0.762 3.238 15 C -0.011 4.011 16 C -0.242 4.242 17 C -0.174 4.174 18 H 0.066 0.934 19 H 0.075 0.925 20 H 0.083 0.917 21 H 0.392 0.608 22 H 0.089 0.911 23 H 0.085 0.915 24 H 0.405 0.595 25 H 0.169 0.831 26 H 0.108 0.892 27 H 0.394 0.606 28 H -0.289 1.289 29 H -0.295 1.295 30 H 0.147 0.853 31 H 0.152 0.848 32 H 0.080 0.920 33 H 0.085 0.915 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.343 2.534 -1.883 3.931 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.219 4.219 2 C 0.063 3.937 3 O -0.381 6.381 4 C -0.173 4.173 5 C 0.031 3.969 6 H 0.145 0.855 7 N -0.340 5.340 8 C 0.158 3.842 9 N -0.284 5.284 10 C -0.010 4.010 11 C -0.243 4.243 12 C -0.164 4.164 13 O -0.364 6.364 14 Si 0.669 3.331 15 C -0.037 4.037 16 C -0.266 4.266 17 C -0.213 4.213 18 H 0.085 0.915 19 H 0.094 0.906 20 H 0.102 0.898 21 H 0.243 0.757 22 H 0.108 0.892 23 H 0.104 0.896 24 H 0.242 0.758 25 H 0.185 0.815 26 H 0.126 0.874 27 H 0.244 0.756 28 H -0.216 1.216 29 H -0.223 1.223 30 H 0.165 0.835 31 H 0.169 0.831 32 H 0.099 0.901 33 H 0.104 0.896 Dipole moment (debyes) X Y Z Total from point charges -1.476 1.755 -0.500 2.347 hybrid contribution -1.126 0.169 -0.279 1.172 sum -2.601 1.924 -0.779 3.328 Atomic orbital electron populations 1.22201 0.92024 1.04233 1.03489 1.22441 0.93375 0.81724 0.96188 1.86525 1.66198 1.23322 1.62095 1.23515 1.02682 0.93557 0.97549 1.22379 0.89265 0.88629 0.96612 0.85547 1.44572 1.13163 1.09037 1.67229 1.18685 0.89626 0.86271 0.89573 1.67145 1.30668 1.06955 1.23662 1.22460 0.97059 0.89972 0.91497 1.21053 0.95488 0.99080 1.08629 1.24827 1.11676 0.95405 0.84482 1.86455 1.54979 1.78800 1.16153 0.93891 0.79931 0.78996 0.80265 1.21421 0.98475 0.92162 0.91656 1.21676 0.98163 0.98376 1.08421 1.24221 1.02339 0.96306 0.98473 0.91469 0.90637 0.89840 0.75737 0.89232 0.89632 0.75841 0.81468 0.87433 0.75631 1.21564 1.22321 0.83501 0.83057 0.90110 0.89608 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.16 1.10 9.32 71.98 0.67 1.77 16 2 C 0.10 -0.33 1.94 -10.26 -0.02 -0.35 16 3 O -0.57 -0.15 13.49 -148.98 -2.01 -2.16 16 4 C -0.13 0.32 7.25 31.12 0.23 0.55 16 5 C 0.14 -0.47 3.68 45.52 0.17 -0.31 16 6 H 0.13 -0.81 5.62 -2.39 -0.01 -0.82 16 7 N -0.71 -0.41 5.53 -322.04 -1.78 -2.19 16 8 C 0.39 1.50 7.65 133.06 1.02 2.52 16 9 N -0.57 -3.59 10.39 -193.26 -2.01 -5.59 16 10 C 0.15 0.40 9.84 84.62 0.83 1.23 16 11 C -0.24 -0.27 5.36 -19.76 -0.11 -0.38 16 12 C -0.05 0.02 2.82 71.24 0.20 0.22 16 13 O -0.56 -0.01 12.84 -148.98 -1.91 -1.92 16 14 Si 0.76 -1.06 29.83 68.60 2.05 0.99 16 15 C -0.01 -0.01 9.83 22.44 0.22 0.21 16 16 C -0.24 -0.17 9.29 22.50 0.21 0.04 16 17 C -0.17 0.58 7.27 31.12 0.23 0.80 16 18 H 0.07 -0.38 8.14 -2.39 -0.02 -0.40 16 19 H 0.07 -0.62 8.14 -2.39 -0.02 -0.64 16 20 H 0.08 -0.76 7.35 -2.39 -0.02 -0.77 16 21 H 0.39 -2.77 9.04 -74.06 -0.67 -3.44 16 22 H 0.09 -0.33 8.10 -2.39 -0.02 -0.35 16 23 H 0.09 0.00 8.12 -2.39 -0.02 -0.02 16 24 H 0.41 0.38 8.85 -92.70 -0.82 -0.45 16 25 H 0.17 -0.28 4.91 -2.91 -0.01 -0.29 16 26 H 0.11 0.03 7.96 -2.39 -0.02 0.01 16 27 H 0.39 -2.96 8.70 -74.06 -0.64 -3.60 16 28 H -0.29 -1.16 7.11 99.48 0.71 -0.45 16 29 H -0.30 -1.69 7.11 99.48 0.71 -0.98 16 30 H 0.15 -0.31 8.06 -2.91 -0.02 -0.33 16 31 H 0.15 -0.61 6.04 -2.91 -0.02 -0.63 16 32 H 0.08 0.00 8.14 -2.39 -0.02 -0.02 16 33 H 0.09 -0.44 8.10 -2.38 -0.02 -0.46 16 Total: 0.00 -15.25 275.82 -2.96 -18.21 By element: Atomic # 1 Polarization: -12.70 SS G_CDS: -0.94 Total: -13.64 kcal Atomic # 6 Polarization: 2.67 SS G_CDS: 3.65 Total: 6.31 kcal Atomic # 7 Polarization: -4.00 SS G_CDS: -3.79 Total: -7.79 kcal Atomic # 8 Polarization: -0.15 SS G_CDS: -3.92 Total: -4.08 kcal Atomic # 14 Polarization: -1.06 SS G_CDS: 2.05 Total: 0.99 kcal Total: -15.25 -2.96 -18.21 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_27_11245584_13915762.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 9.207 kcal (2) G-P(sol) polarization free energy of solvation -15.246 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -6.039 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.962 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.209 kcal (6) G-S(sol) free energy of system = (1) + (5) -9.002 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.32 seconds