Wall clock time and date at job start Tue Mar 9 2021 13:01:57 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.34772 * 1 3 3 O 1.21283 * 120.00134 * 2 1 4 4 C 1.50697 * 120.00360 * 180.02562 * 2 1 3 5 5 H 1.09005 * 112.84802 * 311.19222 * 4 2 1 6 6 C 1.54052 * 113.62270 * 82.50326 * 4 2 1 7 7 C 1.53781 * 86.98687 * 139.97933 * 6 4 2 8 8 H 1.09002 * 113.61445 * 89.16393 * 7 6 4 9 9 N 1.46497 * 113.61305 * 219.98100 * 7 6 4 10 10 C 1.39007 * 120.00048 * 254.13293 * 9 7 6 11 11 C 1.39089 * 119.70432 * 0.02562 * 10 9 7 12 12 C 1.38339 * 119.09862 * 179.97438 * 11 10 9 13 13 C 1.38839 * 118.50665 * 359.97438 * 12 11 10 14 14 C 1.50699 * 120.33518 * 180.02562 * 13 12 11 15 15 O 1.42903 * 109.47380 * 65.00337 * 14 13 12 16 16 Si 1.86306 * 109.46988 * 184.99883 * 14 13 12 17 17 C 1.38062 * 119.32561 * 359.97438 * 13 12 11 18 18 N 1.31944 * 120.85575 * 359.74618 * 17 13 12 19 19 C 1.53783 * 113.61605 * 180.02562 * 4 2 1 20 20 H 0.97010 * 119.99465 * 179.97438 * 1 2 3 21 21 H 0.96998 * 120.00579 * 0.02562 * 1 2 3 22 22 H 1.08999 * 113.60931 * 25.47311 * 6 4 2 23 23 H 1.08998 * 113.69722 * 254.49393 * 6 4 2 24 24 H 0.97006 * 120.00058 * 74.13996 * 9 7 6 25 25 H 1.07997 * 120.45196 * 359.95086 * 11 10 9 26 26 H 1.08000 * 120.75127 * 180.02562 * 12 11 10 27 27 H 1.08997 * 109.47516 * 304.99770 * 14 13 12 28 28 H 0.96695 * 114.00255 * 59.99812 * 15 14 13 29 29 H 1.48501 * 110.00069 * 179.97438 * 16 14 13 30 30 H 1.48492 * 110.00198 * 301.32003 * 16 14 13 31 31 H 1.08002 * 119.57149 * 179.97438 * 17 13 12 32 32 H 1.08992 * 113.61796 * 105.46609 * 19 4 2 33 33 H 1.09000 * 113.61157 * 334.56029 * 19 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.3477 0.0000 0.0000 3 8 1.9542 1.0503 0.0000 4 6 2.1013 -1.3050 -0.0006 5 1 1.7400 -2.0027 0.7550 6 6 2.2505 -1.9311 -1.4002 7 6 3.6826 -2.3111 -0.9886 8 1 3.7538 -3.2850 -0.5041 9 7 4.6672 -2.1349 -2.0590 10 6 5.1846 -3.2447 -2.7170 11 6 4.7628 -4.5196 -2.3545 12 6 5.2855 -5.6152 -3.0180 13 6 6.2154 -5.3979 -4.0258 14 6 6.8109 -6.5614 -4.7758 15 8 5.7858 -7.2239 -5.5191 16 14 8.1228 -5.9412 -5.9442 17 6 6.5883 -4.1049 -4.3345 18 7 6.0690 -3.0783 -3.6885 19 6 3.6296 -1.1339 0.0001 20 1 -0.4850 -0.8402 -0.0004 21 1 -0.4851 0.8400 -0.0004 22 1 2.2077 -1.2035 -2.2107 23 1 1.6015 -2.7907 -1.5671 24 1 4.9581 -1.2438 -2.3085 25 1 4.0374 -4.6524 -1.5655 26 1 4.9766 -6.6170 -2.7586 27 1 7.2560 -7.2606 -4.0679 28 1 5.3452 -6.6605 -6.1698 29 1 8.7184 -7.0792 -6.6895 30 1 7.5354 -4.9629 -6.8944 31 1 7.3117 -3.9313 -5.1175 32 1 4.0928 -1.3507 0.9626 33 1 3.9633 -0.1888 -0.4281 There are 45 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 45 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV m_27_11684968_13915762.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:01:57 Heat of formation + Delta-G solvation = 1.185493 kcal Electronic energy + Delta-G solvation = -17674.241143 eV Core-core repulsion = 14702.323535 eV Total energy + Delta-G solvation = -2971.917608 eV No. of doubly occupied orbitals = 45 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 250.110 amu Computer time = 0.33 seconds Orbital eigenvalues (eV) -41.72424 -41.05748 -39.03705 -37.90076 -35.34350 -34.64499 -33.36907 -31.29070 -27.58831 -26.94196 -25.89482 -24.82281 -22.96602 -21.79177 -20.69038 -19.04039 -18.52021 -18.39233 -17.95502 -17.28336 -16.66404 -16.44095 -16.25745 -15.82577 -15.72109 -15.35121 -14.93098 -14.55218 -14.23218 -14.02406 -13.73053 -13.57941 -13.31066 -12.54677 -12.47439 -12.22072 -11.99304 -11.88184 -11.15813 -10.91367 -10.75126 -10.74436 -10.52456 -10.34406 -8.72258 -4.94028 0.24631 0.43021 1.31413 1.54170 1.60642 1.97900 2.01275 2.52714 2.82884 3.21554 3.26456 3.41022 3.50242 3.57920 3.66498 3.78058 3.94525 4.03256 4.08082 4.24075 4.32840 4.47655 4.55637 4.56726 4.67918 4.74424 4.81186 4.98958 5.05050 5.31833 5.52415 5.71538 5.98968 6.25421 6.42654 6.52425 7.16727 7.20554 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.854 5.854 2 C 0.528 3.472 3 O -0.540 6.540 4 C -0.139 4.139 5 H 0.120 0.880 6 C -0.139 4.139 7 C 0.132 3.868 8 H 0.115 0.885 9 N -0.710 5.710 10 C 0.408 3.592 11 C -0.240 4.240 12 C -0.005 4.005 13 C -0.234 4.234 14 C -0.059 4.059 15 O -0.532 6.532 16 Si 0.679 3.321 17 C 0.156 3.844 18 N -0.539 5.539 19 C -0.122 4.122 20 H 0.403 0.597 21 H 0.402 0.598 22 H 0.092 0.908 23 H 0.083 0.917 24 H 0.408 0.592 25 H 0.134 0.866 26 H 0.135 0.865 27 H 0.116 0.884 28 H 0.375 0.625 29 H -0.256 1.256 30 H -0.258 1.258 31 H 0.155 0.845 32 H 0.084 0.916 33 H 0.103 0.897 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.680 -2.290 2.680 4.428 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.417 5.417 2 C 0.312 3.688 3 O -0.416 6.416 4 C -0.161 4.161 5 H 0.138 0.862 6 C -0.178 4.178 7 C 0.025 3.975 8 H 0.132 0.868 9 N -0.341 5.341 10 C 0.173 3.827 11 C -0.265 4.265 12 C -0.031 4.031 13 C -0.239 4.239 14 C -0.170 4.170 15 O -0.338 6.338 16 Si 0.581 3.419 17 C -0.002 4.002 18 N -0.256 5.256 19 C -0.161 4.161 20 H 0.231 0.769 21 H 0.233 0.767 22 H 0.111 0.889 23 H 0.101 0.899 24 H 0.245 0.755 25 H 0.151 0.849 26 H 0.153 0.847 27 H 0.134 0.866 28 H 0.223 0.777 29 H -0.181 1.181 30 H -0.183 1.183 31 H 0.172 0.828 32 H 0.103 0.897 33 H 0.122 0.878 Dipole moment (debyes) X Y Z Total from point charges -1.545 -1.343 2.147 2.967 hybrid contribution -1.913 -0.603 -0.259 2.022 sum -3.458 -1.947 1.887 4.394 Atomic orbital electron populations 1.43897 1.07276 1.12703 1.77861 1.20365 0.82606 0.91014 0.74799 1.90775 1.68230 1.33490 1.49143 1.22614 0.97184 0.95817 1.00495 0.86198 1.23569 0.97734 1.01255 0.95262 1.22512 0.86937 1.00085 0.87924 0.86750 1.44527 1.45422 1.06591 1.37607 1.18446 0.88847 0.86990 0.88441 1.21462 1.07330 0.91669 1.06020 1.21194 0.91619 0.98955 0.91293 1.20919 1.04304 0.95968 1.02734 1.24747 0.96554 0.95980 0.99682 1.86592 1.51838 1.40890 1.54518 0.95082 0.83760 0.81119 0.81966 1.22288 0.95063 0.87164 0.95691 1.67178 1.13274 1.35313 1.09829 1.23264 0.93122 0.99409 1.00297 0.76921 0.76669 0.88945 0.89865 0.75500 0.84872 0.84672 0.86593 0.77739 1.18071 1.18343 0.82814 0.89694 0.87849 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.85 2.51 8.87 31.22 0.28 2.78 16 2 C 0.53 0.09 7.63 -10.99 -0.08 0.00 16 3 O -0.54 -2.72 16.74 5.55 0.09 -2.63 16 4 C -0.14 0.39 4.15 -90.82 -0.38 0.01 16 5 H 0.12 -0.62 8.14 -51.93 -0.42 -1.04 16 6 C -0.14 0.41 7.45 -25.78 -0.19 0.22 16 7 C 0.13 -0.33 3.98 -67.10 -0.27 -0.60 16 8 H 0.11 -0.44 6.17 -51.93 -0.32 -0.76 16 9 N -0.71 0.23 5.53 -53.13 -0.29 -0.07 16 10 C 0.41 0.59 7.65 -155.01 -1.19 -0.60 16 11 C -0.24 -0.02 9.28 -39.23 -0.36 -0.38 16 12 C 0.00 0.00 9.83 -39.32 -0.39 -0.39 16 13 C -0.23 -0.09 5.36 -104.46 -0.56 -0.65 16 14 C -0.06 0.02 2.82 36.01 0.10 0.12 16 15 O -0.53 -0.58 12.84 -35.23 -0.45 -1.03 16 16 Si 0.68 -0.59 29.91 -169.99 -5.08 -5.68 16 17 C 0.16 0.19 9.84 -17.57 -0.17 0.02 16 18 N -0.54 -1.50 10.39 -12.44 -0.13 -1.63 16 19 C -0.12 0.22 7.16 -25.90 -0.19 0.04 16 20 H 0.40 -2.36 8.83 -40.82 -0.36 -2.72 16 21 H 0.40 -1.23 8.93 -40.82 -0.36 -1.60 16 22 H 0.09 -0.12 8.10 -51.93 -0.42 -0.54 16 23 H 0.08 -0.35 8.14 -51.93 -0.42 -0.77 16 24 H 0.41 -0.04 8.84 -40.82 -0.36 -0.40 16 25 H 0.13 -0.29 6.06 -52.49 -0.32 -0.60 16 26 H 0.14 -0.14 8.06 -52.49 -0.42 -0.57 16 27 H 0.12 -0.13 7.96 -51.93 -0.41 -0.54 16 28 H 0.38 -0.57 8.70 45.56 0.40 -0.17 16 29 H -0.26 -0.61 7.11 56.52 0.40 -0.21 16 30 H -0.26 -0.28 7.01 56.52 0.40 0.12 16 31 H 0.16 -0.07 4.85 -52.49 -0.25 -0.33 16 32 H 0.08 -0.21 8.14 -51.93 -0.42 -0.63 16 33 H 0.10 0.01 7.40 -51.93 -0.38 -0.37 16 LS Contribution 281.87 15.07 4.25 4.25 Total: 0.00 -8.65 281.87 -8.71 -17.36 By element: Atomic # 1 Polarization: -7.45 SS G_CDS: -3.69 Total: -11.14 kcal Atomic # 6 Polarization: 1.46 SS G_CDS: -3.67 Total: -2.21 kcal Atomic # 7 Polarization: 1.23 SS G_CDS: -0.15 Total: 1.08 kcal Atomic # 8 Polarization: -3.30 SS G_CDS: -0.36 Total: -3.66 kcal Atomic # 14 Polarization: -0.59 SS G_CDS: -5.08 Total: -5.68 kcal Total LS contribution 4.25 Total: 4.25 kcal Total: -8.65 -8.71 -17.36 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_27_11684968_13915762.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 18.542 kcal (2) G-P(sol) polarization free energy of solvation -8.647 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 9.895 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.709 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.357 kcal (6) G-S(sol) free energy of system = (1) + (5) 1.185 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.33 seconds