Wall clock time and date at job start Tue Mar 9 2021 13:02:01 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50700 * 1 3 3 C 1.33333 * 125.95561 * 2 1 4 4 C 1.50702 * 122.70650 * 359.97438 * 3 2 1 5 5 O 1.42902 * 109.46935 * 29.99874 * 4 3 2 6 6 Si 1.86296 * 109.47050 * 149.99932 * 4 3 2 7 7 N 1.32117 * 114.58144 * 179.75073 * 3 2 1 8 8 C 1.29693 * 116.86367 * 0.47335 * 7 3 2 9 9 N 1.38612 * 124.94621 * 179.81483 * 8 7 3 10 10 C 1.46495 * 120.00092 * 179.71970 * 9 8 7 11 11 H 1.09010 * 112.85063 * 23.80171 * 10 9 8 12 12 C 1.53784 * 113.61756 * 154.99624 * 10 9 8 13 13 C 1.53788 * 87.07878 * 140.06661 * 12 10 9 14 14 H 1.08996 * 113.61401 * 89.20483 * 13 12 10 15 15 C 1.50696 * 113.61137 * 220.02139 * 13 12 10 16 16 N 1.34777 * 120.00076 * 178.47520 * 15 13 12 17 17 O 1.21281 * 120.00074 * 358.47022 * 15 13 12 18 18 C 1.53784 * 87.17203 * 334.61261 * 13 12 10 19 19 S 1.70959 * 110.10228 * 359.54756 * 8 7 3 20 20 H 1.08991 * 109.47363 * 180.02562 * 1 2 3 21 21 H 1.08996 * 109.47012 * 300.02975 * 1 2 3 22 22 H 1.09000 * 109.46926 * 60.02431 * 1 2 3 23 23 H 1.09008 * 109.46704 * 270.00312 * 4 3 2 24 24 H 0.96705 * 113.99318 * 179.97438 * 5 4 3 25 25 H 1.48498 * 109.99731 * 178.67969 * 6 4 3 26 26 H 1.48498 * 110.00188 * 300.00118 * 6 4 3 27 27 H 0.96998 * 119.99746 * 359.71864 * 9 8 7 28 28 H 1.08999 * 113.60927 * 25.52290 * 12 10 9 29 29 H 1.08997 * 113.61210 * 254.61376 * 12 10 9 30 30 H 0.97001 * 120.00485 * 180.02562 * 16 15 13 31 31 H 0.97005 * 119.99790 * 359.72082 * 16 15 13 32 32 H 1.09000 * 113.60967 * 139.94266 * 18 13 12 33 33 H 1.08996 * 113.61145 * 270.84237 * 18 13 12 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2899 1.0793 0.0000 4 6 1.7415 2.4830 -0.0006 5 8 0.4811 2.5023 0.6726 6 14 2.9321 3.6151 0.8778 7 7 3.5851 0.8187 0.0052 8 6 3.9315 -0.4311 0.0001 9 7 5.2385 -0.8927 0.0006 10 6 5.5066 -2.3329 0.0006 11 1 4.6806 -2.9173 -0.4052 12 6 6.8750 -2.7049 -0.5944 13 6 6.9916 -3.7488 0.5288 14 1 6.5730 -4.7205 0.2669 15 6 8.3741 -3.8473 1.1201 16 7 8.6136 -4.7008 2.1354 17 8 9.2714 -3.1587 0.6823 18 6 6.0337 -2.8653 1.3455 19 16 2.5413 -1.4261 0.0001 20 1 -0.3633 -1.0276 0.0005 21 1 -0.3633 0.5143 0.8897 22 1 -0.3633 0.5135 -0.8902 23 1 1.6097 2.8211 -1.0285 24 1 0.0690 3.3763 0.7107 25 1 2.4180 5.0081 0.8563 26 1 3.1204 3.1648 2.2803 27 1 5.9755 -0.2622 0.0009 28 1 7.6127 -1.9055 -0.5258 29 1 6.8135 -3.1412 -1.5914 30 1 9.5035 -4.7639 2.5163 31 1 7.8950 -5.2486 2.4882 32 1 5.2943 -3.4310 1.9123 33 1 6.5411 -2.1099 1.9454 There are 46 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 46 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV m_27_11684968_15704122.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:02:01 Heat of formation + Delta-G solvation = 5.242298 kcal Electronic energy + Delta-G solvation = -18219.213881 eV Core-core repulsion = 15181.086816 eV Total energy + Delta-G solvation = -3038.127064 eV No. of doubly occupied orbitals = 46 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 270.082 amu Computer time = 0.32 seconds Orbital eigenvalues (eV) -41.54224 -40.81102 -39.09525 -37.71125 -35.38993 -34.64685 -32.50870 -29.36461 -27.16850 -26.97260 -25.47368 -24.17839 -22.50678 -20.98694 -19.93230 -19.37612 -18.68983 -18.08381 -17.81193 -17.25604 -16.64460 -16.25496 -16.22587 -15.71754 -15.49871 -15.18813 -14.58003 -14.11207 -13.99586 -13.87207 -13.72370 -13.44243 -13.25196 -13.00659 -12.56724 -12.44381 -12.19337 -11.95098 -11.56612 -11.06414 -10.88766 -10.75138 -10.54356 -10.40887 -9.92321 -8.53501 -4.64141 0.10540 0.23699 0.84247 1.40432 1.53320 1.78425 1.86133 2.01442 2.18286 2.49986 3.09356 3.14782 3.21636 3.44849 3.58619 3.91271 4.01363 4.12884 4.25924 4.42191 4.43718 4.45953 4.52035 4.63085 4.77270 4.90538 4.93959 4.99429 5.20506 5.41621 5.65477 5.71507 6.24856 6.32053 6.48569 7.00022 7.19834 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.057 4.057 2 C -0.230 4.230 3 C 0.104 3.896 4 C -0.041 4.041 5 O -0.535 6.535 6 Si 0.718 3.282 7 N -0.538 5.538 8 C 0.320 3.680 9 N -0.682 5.682 10 C 0.129 3.871 11 H 0.112 0.888 12 C -0.119 4.119 13 C -0.139 4.139 14 H 0.122 0.878 15 C 0.528 3.472 16 N -0.854 5.854 17 O -0.539 6.539 18 C -0.139 4.139 19 S 0.095 5.905 20 H 0.056 0.944 21 H 0.087 0.913 22 H 0.071 0.929 23 H 0.082 0.918 24 H 0.382 0.618 25 H -0.265 1.265 26 H -0.263 1.263 27 H 0.416 0.584 28 H 0.106 0.894 29 H 0.087 0.913 30 H 0.403 0.597 31 H 0.403 0.597 32 H 0.086 0.914 33 H 0.095 0.905 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.285 -4.066 0.052 4.264 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.116 4.116 2 C -0.352 4.352 3 C -0.025 4.025 4 C -0.154 4.154 5 O -0.342 6.342 6 Si 0.619 3.381 7 N -0.265 5.265 8 C -0.051 4.051 9 N -0.322 5.322 10 C 0.023 3.977 11 H 0.130 0.870 12 C -0.158 4.158 13 C -0.161 4.161 14 H 0.140 0.860 15 C 0.313 3.687 16 N -0.417 5.417 17 O -0.416 6.416 18 C -0.179 4.179 19 S 0.344 5.656 20 H 0.075 0.925 21 H 0.105 0.895 22 H 0.090 0.910 23 H 0.099 0.901 24 H 0.230 0.770 25 H -0.190 1.190 26 H -0.188 1.188 27 H 0.255 0.745 28 H 0.124 0.876 29 H 0.106 0.894 30 H 0.234 0.766 31 H 0.231 0.769 32 H 0.104 0.896 33 H 0.114 0.886 Dipole moment (debyes) X Y Z Total from point charges -0.316 -4.489 0.363 4.515 hybrid contribution -1.017 0.827 0.466 1.391 sum -1.333 -3.662 0.829 3.985 Atomic orbital electron populations 1.20081 0.86519 1.01341 1.03698 1.25104 1.01336 0.92552 1.16214 1.18730 0.86532 0.94972 1.02296 1.23993 0.92090 0.97777 1.01494 1.86540 1.33216 1.35025 1.79427 0.93635 0.87410 0.75013 0.82068 1.65600 1.16819 1.16647 1.27410 1.23229 0.91881 0.91229 0.98764 1.43927 1.01780 1.06484 1.80002 1.22626 0.98252 0.79825 0.97014 0.87015 1.23253 0.95730 0.98535 0.98237 1.22562 0.93485 1.00924 0.99097 0.86034 1.20324 0.90130 0.78864 0.79408 1.43893 1.15901 1.44190 1.37718 1.90778 1.46332 1.43505 1.60942 1.23573 0.98065 0.98883 0.97351 1.83856 0.96603 1.10783 1.74343 0.92485 0.89485 0.91044 0.90055 0.76993 1.19049 1.18771 0.74549 0.87555 0.89445 0.76627 0.76894 0.89562 0.88617 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.06 -0.08 8.91 36.01 0.32 0.24 16 2 C -0.23 -0.68 6.50 -36.02 -0.23 -0.91 16 3 C 0.10 0.37 5.96 -84.18 -0.50 -0.13 16 4 C -0.04 -0.07 2.93 36.01 0.11 0.04 16 5 O -0.53 -0.53 9.80 -35.23 -0.35 -0.88 16 6 Si 0.72 1.21 32.08 -169.99 -5.45 -4.25 16 7 N -0.54 -1.92 8.94 -11.36 -0.10 -2.03 16 8 C 0.32 0.64 8.24 -87.67 -0.72 -0.08 16 9 N -0.68 0.28 5.52 -54.90 -0.30 -0.03 16 10 C 0.13 -0.31 4.23 -67.03 -0.28 -0.60 16 11 H 0.11 -0.35 7.06 -51.92 -0.37 -0.72 16 12 C -0.12 0.26 7.15 -25.91 -0.19 0.07 16 13 C -0.14 0.42 4.14 -90.96 -0.38 0.04 16 14 H 0.12 -0.64 8.14 -51.93 -0.42 -1.06 16 15 C 0.53 -0.08 7.63 -10.99 -0.08 -0.17 16 16 N -0.85 2.70 8.87 31.22 0.28 2.98 16 17 O -0.54 -2.49 16.75 5.56 0.09 -2.40 16 18 C -0.14 0.43 7.45 -25.83 -0.19 0.24 16 19 S 0.10 0.11 21.69 -107.50 -2.33 -2.22 16 20 H 0.06 0.02 8.14 -51.93 -0.42 -0.40 16 21 H 0.09 0.17 6.74 -51.93 -0.35 -0.18 16 22 H 0.07 0.07 8.14 -51.93 -0.42 -0.36 16 23 H 0.08 0.00 7.96 -51.92 -0.41 -0.41 16 24 H 0.38 -1.15 8.74 45.56 0.40 -0.75 16 25 H -0.26 -0.68 7.11 56.52 0.40 -0.28 16 26 H -0.26 -1.48 7.11 56.52 0.40 -1.08 16 27 H 0.42 -0.35 8.85 -40.82 -0.36 -0.71 16 28 H 0.11 -0.06 7.43 -51.93 -0.39 -0.44 16 29 H 0.09 -0.24 8.14 -51.93 -0.42 -0.67 16 30 H 0.40 -1.32 8.93 -40.82 -0.36 -1.69 16 31 H 0.40 -2.43 8.83 -40.82 -0.36 -2.79 16 32 H 0.09 -0.36 8.14 -51.93 -0.42 -0.79 16 33 H 0.10 -0.17 8.09 -51.93 -0.42 -0.59 16 LS Contribution 294.32 15.07 4.44 4.44 Total: 0.00 -8.75 294.32 -9.82 -18.57 By element: Atomic # 1 Polarization: -8.99 SS G_CDS: -3.93 Total: -12.93 kcal Atomic # 6 Polarization: 0.90 SS G_CDS: -2.15 Total: -1.26 kcal Atomic # 7 Polarization: 1.05 SS G_CDS: -0.13 Total: 0.93 kcal Atomic # 8 Polarization: -3.03 SS G_CDS: -0.25 Total: -3.28 kcal Atomic # 14 Polarization: 1.21 SS G_CDS: -5.45 Total: -4.25 kcal Atomic # 16 Polarization: 0.11 SS G_CDS: -2.33 Total: -2.22 kcal Total LS contribution 4.44 Total: 4.44 kcal Total: -8.75 -9.82 -18.57 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_27_11684968_15704122.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 23.809 kcal (2) G-P(sol) polarization free energy of solvation -8.750 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 15.059 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.817 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.566 kcal (6) G-S(sol) free energy of system = (1) + (5) 5.242 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.32 seconds