Wall clock time and date at job start Tue Mar 9 2021 13:04:32 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42896 * 1 3 3 Si 1.86301 * 109.46974 * 2 1 4 4 C 1.50701 * 109.47417 * 120.00123 * 2 1 3 5 5 C 1.38604 * 120.72099 * 244.72454 * 4 2 1 6 6 N 1.32276 * 119.19463 * 179.71476 * 5 4 2 7 7 C 1.32487 * 120.74116 * 0.56805 * 6 5 4 8 8 N 1.38405 * 119.21595 * 179.72738 * 7 6 5 9 9 C 1.46497 * 120.00405 * 359.97438 * 8 7 6 10 10 C 1.52998 * 109.47586 * 180.02562 * 9 8 7 11 11 H 1.08997 * 112.84567 * 314.66524 * 10 9 8 12 12 C 1.53780 * 113.61550 * 85.86014 * 10 9 8 13 13 C 1.53954 * 87.01798 * 139.95305 * 12 10 9 14 14 H 1.09005 * 113.61457 * 89.20150 * 13 12 10 15 15 C 1.50700 * 113.66538 * 220.06798 * 13 12 10 16 16 C 1.38237 * 120.00372 * 37.28895 * 15 13 12 17 17 C 1.38230 * 119.99914 * 179.81134 * 16 15 13 18 18 C 1.38233 * 120.00452 * 0.41522 * 17 16 15 19 19 C 1.38238 * 119.99694 * 359.81599 * 18 17 16 20 20 C 1.38231 * 120.00048 * 359.97438 * 19 18 17 21 21 C 1.53778 * 87.11543 * 334.63728 * 13 12 10 22 22 N 1.32494 * 121.56736 * 359.70338 * 7 6 5 23 23 C 1.32272 * 120.73883 * 0.02562 * 22 7 6 24 24 H 0.96708 * 114.00101 * 299.99304 * 1 2 3 25 25 H 1.09002 * 109.46984 * 240.00143 * 2 1 3 26 26 H 1.48493 * 110.00101 * 300.00094 * 3 2 1 27 27 H 1.48502 * 109.99925 * 61.32089 * 3 2 1 28 28 H 1.08001 * 120.40126 * 0.02562 * 5 4 2 29 29 H 0.97004 * 120.00156 * 179.97438 * 8 7 6 30 30 H 1.09006 * 109.47119 * 300.00013 * 9 8 7 31 31 H 1.09001 * 109.47211 * 59.99849 * 9 8 7 32 32 H 1.08994 * 113.61570 * 254.53238 * 12 10 9 33 33 H 1.09003 * 113.61189 * 25.43650 * 12 10 9 34 34 H 1.08000 * 119.99394 * 359.97438 * 16 15 13 35 35 H 1.08006 * 119.99720 * 180.21145 * 17 16 15 36 36 H 1.07997 * 120.00286 * 179.79365 * 18 17 16 37 37 H 1.08000 * 120.00174 * 179.97438 * 19 18 17 38 38 H 1.08005 * 119.99858 * 179.97438 * 20 19 18 39 39 H 1.09004 * 113.61696 * 270.81588 * 21 13 12 40 40 H 1.08995 * 113.69211 * 139.91797 * 21 13 12 41 41 H 1.07995 * 120.40412 * 180.02562 * 23 22 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9314 -0.7104 1.2304 5 6 2.6471 -0.0263 2.2004 6 7 3.0688 -0.6785 3.2712 7 6 2.8237 -1.9724 3.4162 8 7 3.2847 -2.6247 4.5465 9 6 4.0344 -1.8849 5.5648 10 6 4.4245 -2.8331 6.7004 11 1 3.6023 -3.4748 7.0171 12 6 5.7363 -3.5937 6.4446 13 6 6.0641 -3.3663 7.9316 14 1 5.6919 -4.1544 8.5863 15 6 7.5101 -3.0275 8.1872 16 6 8.2003 -2.2265 7.2967 17 6 9.5255 -1.9126 7.5333 18 6 10.1631 -2.4065 8.6560 19 6 9.4743 -3.2113 9.5441 20 6 8.1478 -3.5218 9.3098 21 6 5.1453 -2.1350 7.8657 22 7 2.1474 -2.6566 2.5052 23 6 1.6930 -2.0635 1.4138 24 1 -0.3934 0.4416 0.7652 25 1 1.7923 -0.5138 -0.8900 26 1 1.5614 2.4679 -1.2084 27 1 1.5878 2.4585 1.2243 28 1 2.8535 1.0276 2.0858 29 1 3.1113 -3.5718 4.6646 30 1 4.9351 -1.4635 5.1182 31 1 3.4140 -1.0803 5.9597 32 1 5.5897 -4.6419 6.1842 33 1 6.4143 -3.0783 5.7643 34 1 7.7033 -1.8440 6.4175 35 1 10.0638 -1.2840 6.8393 36 1 11.1994 -2.1639 8.8391 37 1 9.9725 -3.5976 10.4210 38 1 7.6098 -4.1509 10.0034 39 1 5.6613 -1.2201 7.5746 40 1 4.5217 -2.0061 8.7503 41 1 1.1420 -2.6263 0.6749 There are 54 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 54 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV m_27_12130086_12175864.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:04:32 Heat of formation + Delta-G solvation = 77.082159 kcal Electronic energy + Delta-G solvation = -22557.256586 eV Core-core repulsion = 19211.558637 eV Total energy + Delta-G solvation = -3345.697949 eV No. of doubly occupied orbitals = 54 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 298.142 amu Computer time = 0.53 seconds Orbital eigenvalues (eV) -42.05070 -41.17598 -39.17382 -38.21428 -36.52433 -34.66371 -32.98836 -31.92744 -31.72321 -28.83077 -26.79008 -26.32020 -25.85113 -24.47178 -23.53979 -23.04848 -21.84693 -20.34578 -19.32179 -18.66769 -18.19154 -17.80329 -16.87339 -16.60335 -16.22178 -16.17204 -16.02220 -15.75671 -15.66952 -15.35898 -14.74105 -14.62467 -14.47864 -14.24782 -14.01778 -13.97247 -13.49465 -13.19349 -13.12703 -12.74413 -12.43512 -12.22096 -12.07661 -11.82538 -11.73432 -11.58499 -11.56216 -11.33211 -11.11306 -10.70695 -9.99395 -9.80430 -9.54772 -9.07637 -5.02490 0.09608 0.19785 0.44616 0.51639 1.22395 1.52093 1.83873 1.91541 2.84711 2.85794 3.15967 3.32997 3.45113 3.48409 3.54094 3.64885 3.73514 3.85551 3.90157 3.98777 4.06203 4.13587 4.17520 4.21992 4.25670 4.40594 4.55435 4.58244 4.61714 4.68083 4.72890 4.75371 4.76896 4.85945 4.95033 5.06747 5.11691 5.17708 5.23588 5.37540 5.59383 5.65340 5.74767 5.80017 6.03810 6.11694 6.34973 6.43461 7.32986 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.530 6.530 2 C -0.053 4.053 3 Si 0.679 3.321 4 C -0.294 4.294 5 C 0.198 3.802 6 N -0.563 5.563 7 C 0.566 3.434 8 N -0.694 5.694 9 C 0.147 3.853 10 C -0.127 4.127 11 H 0.098 0.902 12 C -0.128 4.128 13 C -0.073 4.073 14 H 0.098 0.902 15 C -0.072 4.072 16 C -0.117 4.117 17 C -0.118 4.118 18 C -0.125 4.125 19 C -0.118 4.118 20 C -0.117 4.117 21 C -0.117 4.117 22 N -0.570 5.570 23 C 0.224 3.776 24 H 0.376 0.624 25 H 0.120 0.880 26 H -0.253 1.253 27 H -0.258 1.258 28 H 0.166 0.834 29 H 0.415 0.585 30 H 0.070 0.930 31 H 0.069 0.931 32 H 0.071 0.929 33 H 0.088 0.912 34 H 0.121 0.879 35 H 0.122 0.878 36 H 0.121 0.879 37 H 0.121 0.879 38 H 0.120 0.880 39 H 0.088 0.912 40 H 0.074 0.926 41 H 0.170 0.830 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.284 0.429 1.037 2.545 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.336 6.336 2 C -0.164 4.164 3 Si 0.580 3.420 4 C -0.302 4.302 5 C 0.030 3.970 6 N -0.285 5.285 7 C 0.210 3.790 8 N -0.330 5.330 9 C 0.023 3.977 10 C -0.146 4.146 11 H 0.117 0.883 12 C -0.165 4.165 13 C -0.092 4.092 14 H 0.117 0.883 15 C -0.072 4.072 16 C -0.135 4.135 17 C -0.136 4.136 18 C -0.143 4.143 19 C -0.136 4.136 20 C -0.135 4.135 21 C -0.155 4.155 22 N -0.292 5.292 23 C 0.055 3.945 24 H 0.223 0.777 25 H 0.138 0.862 26 H -0.178 1.178 27 H -0.183 1.183 28 H 0.183 0.817 29 H 0.252 0.748 30 H 0.089 0.911 31 H 0.088 0.912 32 H 0.090 0.910 33 H 0.107 0.893 34 H 0.139 0.861 35 H 0.140 0.860 36 H 0.139 0.861 37 H 0.139 0.861 38 H 0.139 0.861 39 H 0.107 0.893 40 H 0.093 0.907 41 H 0.187 0.813 Dipole moment (debyes) X Y Z Total from point charges 2.619 0.575 1.502 3.074 hybrid contribution -1.393 -0.149 -0.119 1.406 sum 1.226 0.426 1.384 1.897 Atomic orbital electron populations 1.86612 1.17799 1.79877 1.49320 1.24666 0.83734 1.10535 0.97463 0.95184 0.91512 0.74591 0.80695 1.21632 1.09246 0.97753 1.01611 1.22831 0.88141 0.99401 0.86602 1.67940 1.27261 1.08279 1.25055 1.19416 0.87074 0.85537 0.86985 1.44185 1.58540 1.12211 1.18066 1.21367 0.95820 0.93930 0.86587 1.22820 0.97735 0.98294 0.95751 0.88343 1.23222 0.96361 1.01091 0.95834 1.21515 0.91198 0.98755 0.97694 0.88330 1.19705 0.95091 0.97458 0.94903 1.21012 0.94564 0.98595 0.99315 1.21179 0.94930 0.99859 0.97624 1.21197 1.00068 0.98078 0.94932 1.21187 0.94667 0.98326 0.99450 1.21083 0.94907 1.00238 0.97290 1.22984 0.97352 0.97348 0.97774 1.67990 1.16658 1.40052 1.04471 1.22837 0.89127 0.90960 0.91542 0.77672 0.86242 1.17783 1.18258 0.81720 0.74763 0.91134 0.91240 0.90979 0.89344 0.86068 0.86029 0.86099 0.86052 0.86150 0.89305 0.90700 0.81308 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -0.19 12.85 -35.23 -0.45 -0.64 16 2 C -0.05 0.06 2.83 36.01 0.10 0.16 16 3 Si 0.68 -1.22 29.94 -169.99 -5.09 -6.31 16 4 C -0.29 0.00 5.36 -104.35 -0.56 -0.56 16 5 C 0.20 0.10 9.92 -17.23 -0.17 -0.07 16 6 N -0.56 -1.37 9.59 -13.93 -0.13 -1.51 16 7 C 0.57 1.50 8.42 -322.82 -2.72 -1.22 16 8 N -0.69 -0.31 5.70 -62.31 -0.36 -0.67 16 9 C 0.15 -0.13 5.47 -4.04 -0.02 -0.15 16 10 C -0.13 0.29 3.75 -89.81 -0.34 -0.04 16 11 H 0.10 -0.26 8.14 -51.93 -0.42 -0.68 16 12 C -0.13 0.23 7.02 -25.83 -0.18 0.05 16 13 C -0.07 0.10 3.98 -90.87 -0.36 -0.26 16 14 H 0.10 -0.17 8.09 -51.93 -0.42 -0.59 16 15 C -0.07 -0.03 5.29 -104.62 -0.55 -0.58 16 16 C -0.12 -0.05 8.63 -39.58 -0.34 -0.39 16 17 C -0.12 -0.07 10.05 -39.59 -0.40 -0.47 16 18 C -0.12 -0.09 10.05 -39.58 -0.40 -0.49 16 19 C -0.12 -0.08 10.05 -39.58 -0.40 -0.48 16 20 C -0.12 -0.07 9.71 -39.58 -0.38 -0.46 16 21 C -0.12 0.22 7.11 -25.92 -0.18 0.04 16 22 N -0.57 -1.66 10.46 -13.93 -0.15 -1.80 16 23 C 0.22 0.25 10.99 -17.23 -0.19 0.07 16 24 H 0.38 -0.82 8.70 45.56 0.40 -0.43 16 25 H 0.12 -0.25 7.96 -51.93 -0.41 -0.66 16 26 H -0.25 -0.40 7.11 56.52 0.40 0.00 16 27 H -0.26 -0.01 7.03 56.52 0.40 0.39 16 28 H 0.17 -0.30 5.01 -52.49 -0.26 -0.56 16 29 H 0.41 -0.24 8.59 -40.82 -0.35 -0.59 16 30 H 0.07 -0.03 7.87 -51.93 -0.41 -0.44 16 31 H 0.07 -0.01 8.14 -51.93 -0.42 -0.43 16 32 H 0.07 -0.12 8.14 -51.93 -0.42 -0.55 16 33 H 0.09 -0.12 6.08 -51.93 -0.32 -0.44 16 34 H 0.12 -0.11 6.65 -52.49 -0.35 -0.46 16 35 H 0.12 -0.12 8.06 -52.48 -0.42 -0.54 16 36 H 0.12 -0.10 8.06 -52.49 -0.42 -0.53 16 37 H 0.12 -0.11 8.06 -52.49 -0.42 -0.53 16 38 H 0.12 -0.10 8.06 -52.48 -0.42 -0.52 16 39 H 0.09 -0.14 7.69 -51.93 -0.40 -0.54 16 40 H 0.07 -0.15 8.14 -51.93 -0.42 -0.58 16 41 H 0.17 -0.12 8.06 -52.49 -0.42 -0.54 16 LS Contribution 340.81 15.07 5.14 5.14 Total: 0.00 -6.21 340.81 -13.67 -19.88 By element: Atomic # 1 Polarization: -3.69 SS G_CDS: -5.53 Total: -9.22 kcal Atomic # 6 Polarization: 2.24 SS G_CDS: -7.10 Total: -4.86 kcal Atomic # 7 Polarization: -3.34 SS G_CDS: -0.63 Total: -3.98 kcal Atomic # 8 Polarization: -0.19 SS G_CDS: -0.45 Total: -0.64 kcal Atomic # 14 Polarization: -1.22 SS G_CDS: -5.09 Total: -6.31 kcal Total LS contribution 5.14 Total: 5.14 kcal Total: -6.21 -13.67 -19.88 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_27_12130086_12175864.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 96.963 kcal (2) G-P(sol) polarization free energy of solvation -6.213 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 90.750 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -13.668 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.881 kcal (6) G-S(sol) free energy of system = (1) + (5) 77.082 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.53 seconds