Wall clock time and date at job start Tue Mar 9 2021 13:04:34 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42902 * 1 3 3 Si 1.86293 * 109.47245 * 2 1 4 4 C 1.50706 * 109.47060 * 120.00166 * 2 1 3 5 5 C 1.38015 * 120.33458 * 244.99935 * 4 2 1 6 6 N 1.31969 * 120.85447 * 179.97438 * 5 4 2 7 7 C 1.32391 * 121.62991 * 0.02562 * 6 5 4 8 8 N 1.38995 * 119.71410 * 179.97438 * 7 6 5 9 9 C 1.46506 * 120.00403 * 179.97438 * 8 7 6 10 10 C 1.52998 * 109.47195 * 180.02562 * 9 8 7 11 11 H 1.08996 * 112.84974 * 43.80406 * 10 9 8 12 12 C 1.53782 * 113.61344 * 175.00007 * 10 9 8 13 13 C 1.53784 * 87.07997 * 139.98047 * 12 10 9 14 14 H 1.08999 * 113.61908 * 89.20236 * 13 12 10 15 15 C 1.50701 * 113.61421 * 220.01937 * 13 12 10 16 16 C 1.38234 * 120.00243 * 238.47016 * 15 13 12 17 17 C 1.38234 * 120.00240 * 180.02562 * 16 15 13 18 18 C 1.38233 * 120.00037 * 0.26327 * 17 16 15 19 19 C 1.38239 * 119.99756 * 359.45918 * 18 17 16 20 20 C 1.38234 * 119.99962 * 0.55996 * 19 18 17 21 21 C 1.53785 * 87.17476 * 334.60845 * 13 12 10 22 22 C 1.39145 * 120.58030 * 0.27532 * 7 6 5 23 23 C 1.38290 * 119.09893 * 359.43585 * 22 7 6 24 24 H 0.96704 * 113.99852 * 299.99974 * 1 2 3 25 25 H 1.08997 * 109.47040 * 239.99597 * 2 1 3 26 26 H 1.48491 * 110.00154 * 300.00199 * 3 2 1 27 27 H 1.48507 * 110.00198 * 61.32082 * 3 2 1 28 28 H 1.07994 * 119.57400 * 359.97438 * 5 4 2 29 29 H 0.97000 * 120.00155 * 0.02562 * 8 7 6 30 30 H 1.08997 * 109.46577 * 60.00114 * 9 8 7 31 31 H 1.09005 * 109.46751 * 300.00320 * 9 8 7 32 32 H 1.09001 * 113.61218 * 25.43460 * 12 10 9 33 33 H 1.08993 * 113.69182 * 254.53533 * 12 10 9 34 34 H 1.07999 * 119.99751 * 359.97438 * 16 15 13 35 35 H 1.08002 * 119.99744 * 179.97438 * 17 16 15 36 36 H 1.07998 * 120.00395 * 179.72811 * 18 17 16 37 37 H 1.07999 * 119.99955 * 180.28388 * 19 18 17 38 38 H 1.08001 * 120.00274 * 179.72702 * 20 19 18 39 39 H 1.08994 * 113.61529 * 139.93777 * 21 13 12 40 40 H 1.08995 * 113.61597 * 270.84723 * 21 13 12 41 41 H 1.08006 * 120.44989 * 179.70121 * 22 7 6 42 42 H 1.08000 * 120.75332 * 180.25895 * 23 22 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9314 -0.7105 1.2305 5 6 2.6383 -0.0202 2.1941 6 7 3.0825 -0.6320 3.2758 7 6 2.8707 -1.9228 3.4798 8 7 3.3571 -2.5270 4.6332 9 6 3.1259 -3.9549 4.8657 10 6 3.7592 -4.3640 6.1970 11 1 3.5678 -3.6466 6.9949 12 6 3.4689 -5.8206 6.5954 13 6 4.9258 -5.8953 7.0818 14 1 5.0546 -5.5982 8.1226 15 6 5.6041 -7.2016 6.7581 16 6 6.1224 -7.9818 7.7747 17 6 6.7451 -9.1797 7.4777 18 6 6.8542 -9.5948 6.1637 19 6 6.3308 -8.8174 5.1475 20 6 5.7086 -7.6192 5.4445 21 6 5.2386 -4.7734 6.0776 22 6 2.1708 -2.6815 2.5467 23 6 1.6876 -2.0665 1.4062 24 1 -0.3933 0.4417 0.7651 25 1 1.7923 -0.5139 -0.8899 26 1 1.5615 2.4678 -1.2084 27 1 1.5880 2.4585 1.2243 28 1 2.8305 1.0341 2.0613 29 1 3.8491 -2.0031 5.2847 30 1 3.5744 -4.5318 4.0570 31 1 2.0537 -4.1486 4.8990 32 1 3.2579 -6.4716 5.7469 33 1 2.7358 -5.9179 7.3961 34 1 6.0416 -7.6551 8.8009 35 1 7.1504 -9.7891 8.2720 36 1 7.3446 -10.5286 5.9313 37 1 6.4121 -9.1439 4.1213 38 1 5.3035 -7.0097 4.6502 39 1 5.9320 -4.0250 6.4610 40 1 5.5122 -5.1375 5.0873 41 1 2.0033 -3.7354 2.7130 42 1 1.1373 -2.6288 0.6665 There are 54 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 54 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV m_27_12130086_13915762.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:04:34 Heat of formation + Delta-G solvation = 59.284343 kcal Electronic energy + Delta-G solvation = -22394.876002 eV Core-core repulsion = 19113.832193 eV Total energy + Delta-G solvation = -3281.043809 eV No. of doubly occupied orbitals = 54 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 297.147 amu Computer time = 0.59 seconds Orbital eigenvalues (eV) -41.48783 -41.08286 -39.18896 -38.06914 -36.39830 -33.46027 -32.55629 -31.82327 -31.36017 -28.69287 -26.81041 -26.08391 -25.00366 -24.36015 -23.56630 -22.48115 -21.77671 -20.33812 -18.64729 -18.56691 -17.94827 -17.46404 -16.82615 -16.41790 -16.23864 -16.16025 -15.90513 -15.68490 -15.47929 -15.13637 -14.70371 -14.43583 -14.30694 -14.23840 -14.01294 -13.97641 -13.54474 -13.29557 -13.18037 -12.76795 -12.47140 -12.39511 -12.11683 -11.91854 -11.62416 -11.54669 -11.33393 -11.08258 -10.70124 -10.50739 -10.32721 -9.83393 -9.57800 -8.69217 -4.93308 0.28346 0.41624 0.45781 0.48624 1.32626 1.61410 1.99064 2.08072 2.81817 2.88881 3.39198 3.42003 3.43763 3.51041 3.64557 3.80528 3.85758 3.94129 3.99353 4.04772 4.09740 4.11473 4.13660 4.21783 4.31735 4.37474 4.49280 4.56299 4.58676 4.60393 4.64660 4.71524 4.77612 4.78760 4.91380 5.01873 5.03645 5.08550 5.14202 5.30522 5.33885 5.53929 5.56375 5.62518 5.71629 6.00902 6.08694 6.44379 6.54853 7.19346 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.532 6.532 2 C -0.059 4.059 3 Si 0.680 3.320 4 C -0.235 4.235 5 C 0.155 3.845 6 N -0.541 5.541 7 C 0.408 3.592 8 N -0.721 5.721 9 C 0.137 3.863 10 C -0.124 4.124 11 H 0.099 0.901 12 C -0.119 4.119 13 C -0.073 4.073 14 H 0.099 0.901 15 C -0.072 4.072 16 C -0.117 4.117 17 C -0.118 4.118 18 C -0.124 4.124 19 C -0.118 4.118 20 C -0.117 4.117 21 C -0.127 4.127 22 C -0.239 4.239 23 C -0.005 4.005 24 H 0.375 0.625 25 H 0.116 0.884 26 H -0.256 1.256 27 H -0.259 1.259 28 H 0.155 0.845 29 H 0.406 0.594 30 H 0.066 0.934 31 H 0.065 0.935 32 H 0.088 0.912 33 H 0.075 0.925 34 H 0.121 0.879 35 H 0.122 0.878 36 H 0.121 0.879 37 H 0.122 0.878 38 H 0.121 0.879 39 H 0.072 0.928 40 H 0.088 0.912 41 H 0.132 0.868 42 H 0.135 0.865 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.750 -2.253 1.298 3.135 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.338 6.338 2 C -0.170 4.170 3 Si 0.581 3.419 4 C -0.240 4.240 5 C -0.003 4.003 6 N -0.258 5.258 7 C 0.172 3.828 8 N -0.354 5.354 9 C 0.013 3.987 10 C -0.143 4.143 11 H 0.118 0.882 12 C -0.156 4.156 13 C -0.092 4.092 14 H 0.117 0.883 15 C -0.072 4.072 16 C -0.135 4.135 17 C -0.136 4.136 18 C -0.142 4.142 19 C -0.136 4.136 20 C -0.135 4.135 21 C -0.164 4.164 22 C -0.264 4.264 23 C -0.031 4.031 24 H 0.223 0.777 25 H 0.134 0.866 26 H -0.181 1.181 27 H -0.183 1.183 28 H 0.172 0.828 29 H 0.242 0.758 30 H 0.084 0.916 31 H 0.084 0.916 32 H 0.106 0.894 33 H 0.093 0.907 34 H 0.139 0.861 35 H 0.140 0.860 36 H 0.139 0.861 37 H 0.140 0.860 38 H 0.139 0.861 39 H 0.091 0.909 40 H 0.106 0.894 41 H 0.150 0.850 42 H 0.153 0.847 Dipole moment (debyes) X Y Z Total from point charges 2.048 -1.481 1.398 2.889 hybrid contribution -1.288 -0.563 0.245 1.426 sum 0.761 -2.044 1.643 2.730 Atomic orbital electron populations 1.86594 1.18009 1.79937 1.49304 1.24754 0.83655 1.10570 0.97991 0.95101 0.91697 0.74732 0.80362 1.20909 1.07156 0.95985 0.99993 1.22261 0.91337 0.99015 0.87640 1.67157 1.25875 1.09078 1.23649 1.18410 0.89175 0.88452 0.86774 1.44519 1.60592 1.09368 1.20904 1.21447 1.00310 0.80177 0.96760 1.22796 0.96741 0.97730 0.96988 0.88233 1.23006 0.96081 0.94980 1.01580 1.21486 0.95452 0.92179 1.00057 0.88309 1.19704 0.98328 0.95820 0.93325 1.21087 0.98588 0.94860 0.98964 1.21192 0.99142 0.96530 0.96723 1.21201 1.00020 0.99995 0.93028 1.21179 0.98199 0.94831 0.99389 1.20992 0.99938 0.96598 0.95996 1.23217 0.95741 0.97605 0.99856 1.21449 1.06818 1.01304 0.96860 1.21191 0.93045 0.93423 0.95397 0.77743 0.86622 1.18094 1.18349 0.82845 0.75818 0.91604 0.91639 0.89393 0.90670 0.86131 0.86025 0.86079 0.86034 0.86150 0.90916 0.89373 0.84999 0.84713 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -0.77 12.84 -35.23 -0.45 -1.22 16 2 C -0.06 0.00 2.82 36.01 0.10 0.10 16 3 Si 0.68 -0.47 29.91 -169.99 -5.08 -5.55 16 4 C -0.24 -0.19 5.36 -104.46 -0.56 -0.75 16 5 C 0.16 0.23 9.84 -17.57 -0.17 0.06 16 6 N -0.54 -1.62 10.39 -12.44 -0.13 -1.75 16 7 C 0.41 0.75 7.65 -155.03 -1.19 -0.44 16 8 N -0.72 0.20 5.73 -60.42 -0.35 -0.15 16 9 C 0.14 -0.30 4.73 -4.04 -0.02 -0.32 16 10 C -0.12 0.36 3.75 -89.71 -0.34 0.02 16 11 H 0.10 -0.29 8.14 -51.93 -0.42 -0.71 16 12 C -0.12 0.30 7.11 -25.92 -0.18 0.11 16 13 C -0.07 0.13 3.98 -90.96 -0.36 -0.24 16 14 H 0.10 -0.20 8.09 -51.93 -0.42 -0.62 16 15 C -0.07 0.00 5.29 -104.62 -0.55 -0.56 16 16 C -0.12 -0.05 9.71 -39.58 -0.38 -0.43 16 17 C -0.12 -0.06 10.05 -39.58 -0.40 -0.46 16 18 C -0.12 -0.06 10.05 -39.58 -0.40 -0.46 16 19 C -0.12 -0.04 10.05 -39.58 -0.40 -0.44 16 20 C -0.12 0.00 8.54 -39.58 -0.34 -0.34 16 21 C -0.13 0.28 7.03 -25.82 -0.18 0.10 16 22 C -0.24 -0.20 9.33 -39.23 -0.37 -0.56 16 23 C 0.00 0.00 9.84 -39.32 -0.39 -0.39 16 24 H 0.38 -0.45 8.70 45.56 0.40 -0.05 16 25 H 0.12 -0.09 7.96 -51.93 -0.41 -0.51 16 26 H -0.26 -0.65 7.11 56.52 0.40 -0.25 16 27 H -0.26 -0.32 7.01 56.52 0.40 0.08 16 28 H 0.15 -0.05 4.85 -52.49 -0.25 -0.30 16 29 H 0.41 -0.25 8.60 -40.82 -0.35 -0.60 16 30 H 0.07 -0.16 7.63 -51.93 -0.40 -0.55 16 31 H 0.07 -0.14 7.94 -51.93 -0.41 -0.56 16 32 H 0.09 -0.21 7.60 -51.93 -0.39 -0.61 16 33 H 0.07 -0.19 8.14 -51.93 -0.42 -0.61 16 34 H 0.12 -0.13 8.05 -52.49 -0.42 -0.55 16 35 H 0.12 -0.13 8.06 -52.49 -0.42 -0.55 16 36 H 0.12 -0.13 8.06 -52.49 -0.42 -0.55 16 37 H 0.12 -0.15 8.06 -52.49 -0.42 -0.58 16 38 H 0.12 -0.18 6.73 -52.49 -0.35 -0.53 16 39 H 0.07 -0.14 8.14 -51.93 -0.42 -0.56 16 40 H 0.09 -0.16 6.16 -51.93 -0.32 -0.48 16 41 H 0.13 -0.12 6.71 -52.48 -0.35 -0.47 16 42 H 0.14 -0.05 8.06 -52.49 -0.42 -0.48 16 LS Contribution 343.73 15.07 5.18 5.18 Total: 0.00 -5.71 343.73 -12.81 -18.52 By element: Atomic # 1 Polarization: -4.18 SS G_CDS: -5.85 Total: -10.04 kcal Atomic # 6 Polarization: 1.13 SS G_CDS: -6.12 Total: -4.99 kcal Atomic # 7 Polarization: -1.42 SS G_CDS: -0.48 Total: -1.90 kcal Atomic # 8 Polarization: -0.77 SS G_CDS: -0.45 Total: -1.22 kcal Atomic # 14 Polarization: -0.47 SS G_CDS: -5.08 Total: -5.55 kcal Total LS contribution 5.18 Total: 5.18 kcal Total: -5.71 -12.81 -18.52 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_27_12130086_13915762.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 77.806 kcal (2) G-P(sol) polarization free energy of solvation -5.714 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 72.093 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.808 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.522 kcal (6) G-S(sol) free energy of system = (1) + (5) 59.284 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.59 seconds