Wall clock time and date at job start Tue Mar 9 2021 13:04:42 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42898 * 1 3 3 Si 1.86300 * 109.46765 * 2 1 4 4 C 1.50696 * 109.47331 * 119.99846 * 2 1 3 5 5 C 1.37988 * 120.32638 * 245.00552 * 4 2 1 6 6 N 1.32016 * 120.89913 * 179.97438 * 5 4 2 7 7 C 1.32336 * 121.64742 * 359.97438 * 6 5 4 8 8 N 1.39138 * 119.71802 * 179.97438 * 7 6 5 9 9 C 1.46499 * 120.00159 * 359.97438 * 8 7 6 10 10 C 1.52992 * 109.47349 * 180.02562 * 9 8 7 11 11 H 1.08999 * 112.85320 * 316.19740 * 10 9 8 12 12 C 1.53779 * 113.69526 * 87.46914 * 10 9 8 13 13 C 1.53772 * 87.08546 * 139.99046 * 12 10 9 14 14 H 1.09007 * 113.69031 * 89.12712 * 13 12 10 15 15 C 1.50703 * 113.61999 * 220.02066 * 13 12 10 16 16 C 1.38234 * 120.00257 * 217.50249 * 15 13 12 17 17 C 1.38238 * 119.99675 * 180.27927 * 16 15 13 18 18 C 1.38229 * 120.00124 * 359.45911 * 17 16 15 19 19 C 1.38234 * 119.99957 * 0.56005 * 18 17 16 20 20 C 1.38234 * 119.99503 * 37.51849 * 15 13 12 21 21 C 1.53783 * 87.08482 * 334.56982 * 13 12 10 22 22 C 1.39340 * 120.56424 * 0.25388 * 7 6 5 23 23 F 1.35098 * 120.47531 * 179.71986 * 22 7 6 24 24 C 1.38457 * 119.05474 * 359.49902 * 22 7 6 25 25 H 0.96701 * 114.00308 * 299.99539 * 1 2 3 26 26 H 1.09000 * 109.47423 * 239.99910 * 2 1 3 27 27 H 1.48496 * 110.00242 * 178.68146 * 3 2 1 28 28 H 1.48507 * 110.00222 * 300.00170 * 3 2 1 29 29 H 1.07994 * 119.55165 * 359.97438 * 5 4 2 30 30 H 0.96994 * 120.00336 * 180.02562 * 8 7 6 31 31 H 1.09002 * 109.46826 * 60.00628 * 9 8 7 32 32 H 1.09003 * 109.47402 * 300.00990 * 9 8 7 33 33 H 1.09008 * 113.61000 * 25.44002 * 12 10 9 34 34 H 1.09002 * 113.61536 * 254.54774 * 12 10 9 35 35 H 1.08002 * 119.99744 * 359.97438 * 16 15 13 36 36 H 1.08004 * 119.99577 * 179.72816 * 17 16 15 37 37 H 1.07999 * 119.99961 * 180.28392 * 18 17 16 38 38 H 1.08001 * 120.00274 * 179.72697 * 19 18 17 39 39 H 1.07997 * 120.00460 * 0.02562 * 20 15 13 40 40 H 1.09003 * 113.61626 * 139.97560 * 21 13 12 41 41 H 1.08992 * 113.61393 * 270.80257 * 21 13 12 42 42 H 1.08000 * 120.75463 * 180.23755 * 24 22 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9314 -0.7103 1.2304 5 6 2.6381 -0.0200 2.1937 6 7 3.0830 -0.6309 3.2762 7 6 2.8713 -1.9209 3.4820 8 7 3.3590 -2.5242 4.6371 9 6 4.1036 -1.7319 5.6190 10 6 4.5238 -2.6288 6.7850 11 1 3.7260 -3.2931 7.1170 12 6 5.8673 -3.3430 6.5623 13 6 6.1741 -3.0591 8.0422 14 1 5.8280 -3.8404 8.7189 15 6 7.6039 -2.6562 8.2960 16 6 8.2523 -3.0907 9.4369 17 6 9.5620 -2.7163 9.6724 18 6 10.2268 -1.9168 8.7616 19 6 9.5783 -1.4821 7.6209 20 6 8.2668 -1.8520 7.3879 21 6 5.2085 -1.8672 7.9323 22 6 2.1693 -2.6814 2.5491 23 9 1.9592 -3.9994 2.7584 24 6 1.6862 -2.0661 1.4068 25 1 -0.3934 0.4416 0.7651 26 1 1.7924 -0.5138 -0.8900 27 1 3.5344 1.7705 0.0321 28 1 1.5613 2.4680 -1.2085 29 1 2.8299 1.0344 2.0604 30 1 3.2066 -3.4694 4.7920 31 1 3.4711 -0.9255 5.9901 32 1 4.9911 -1.3098 5.1474 33 1 6.5297 -2.8215 5.8712 34 1 5.7652 -4.4038 6.3332 35 1 7.7341 -3.7185 10.1466 36 1 10.0672 -3.0522 10.5660 37 1 11.2515 -1.6282 8.9434 38 1 10.0963 -0.8538 6.9114 39 1 7.7601 -1.5120 6.4969 40 1 4.5745 -1.7367 8.8093 41 1 5.6910 -0.9421 7.6173 42 1 1.1352 -2.6285 0.6675 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV m_27_12130086_17656566.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:04:42 Heat of formation + Delta-G solvation = 14.653002 kcal Electronic energy + Delta-G solvation = -24837.058083 eV Core-core repulsion = 21084.624938 eV Total energy + Delta-G solvation = -3752.433145 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 315.138 amu Computer time = 0.66 seconds Orbital eigenvalues (eV) -49.84938 -41.47309 -41.09997 -39.16438 -38.07393 -36.42106 -33.30134 -32.59328 -31.80416 -31.40536 -28.70585 -26.78200 -26.27511 -25.28915 -24.02981 -23.52889 -22.86611 -21.83064 -20.33821 -19.27821 -18.46030 -18.31160 -17.87296 -17.50352 -17.00015 -16.78942 -16.24628 -16.07655 -15.90071 -15.86383 -15.64404 -15.36176 -15.04275 -14.76485 -14.34396 -14.31127 -14.21007 -13.97009 -13.92708 -13.52966 -13.47680 -13.12545 -12.75944 -12.59327 -12.43391 -12.09478 -12.07341 -11.59195 -11.57291 -11.32730 -11.11383 -10.68144 -10.65828 -10.45138 -9.80906 -9.55200 -8.74042 -5.08916 -0.05251 0.14249 0.44205 0.51076 1.22790 1.58755 1.93724 1.97610 2.57693 2.84337 3.06396 3.24954 3.41818 3.46874 3.48673 3.58999 3.60930 3.84559 3.88859 3.98231 4.03781 4.06199 4.13151 4.18147 4.25170 4.40393 4.40907 4.49224 4.59372 4.61286 4.68063 4.71296 4.74174 4.75786 4.86630 4.95098 4.98828 5.07050 5.11304 5.17448 5.34005 5.40243 5.58884 5.64832 5.74534 5.95626 6.11194 6.17636 6.52874 6.97011 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.541 6.541 2 C -0.054 4.054 3 Si 0.684 3.316 4 C -0.212 4.212 5 C 0.149 3.851 6 N -0.513 5.513 7 C 0.391 3.609 8 N -0.716 5.716 9 C 0.143 3.857 10 C -0.128 4.128 11 H 0.097 0.903 12 C -0.128 4.128 13 C -0.074 4.074 14 H 0.098 0.902 15 C -0.071 4.071 16 C -0.117 4.117 17 C -0.118 4.118 18 C -0.125 4.125 19 C -0.118 4.118 20 C -0.117 4.117 21 C -0.117 4.117 22 C -0.022 4.022 23 F -0.134 7.134 24 C -0.037 4.037 25 H 0.380 0.620 26 H 0.115 0.885 27 H -0.254 1.254 28 H -0.251 1.251 29 H 0.163 0.837 30 H 0.412 0.588 31 H 0.070 0.930 32 H 0.069 0.931 33 H 0.088 0.912 34 H 0.070 0.930 35 H 0.121 0.879 36 H 0.122 0.878 37 H 0.121 0.879 38 H 0.121 0.879 39 H 0.121 0.879 40 H 0.074 0.926 41 H 0.088 0.912 42 H 0.149 0.851 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.002 1.546 2.659 3.076 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.346 6.346 2 C -0.166 4.166 3 Si 0.585 3.415 4 C -0.217 4.217 5 C -0.008 4.008 6 N -0.230 5.230 7 C 0.152 3.848 8 N -0.349 5.349 9 C 0.020 3.980 10 C -0.146 4.146 11 H 0.116 0.884 12 C -0.166 4.166 13 C -0.092 4.092 14 H 0.117 0.883 15 C -0.071 4.071 16 C -0.135 4.135 17 C -0.136 4.136 18 C -0.143 4.143 19 C -0.136 4.136 20 C -0.135 4.135 21 C -0.155 4.155 22 C -0.048 4.048 23 F -0.113 7.113 24 C -0.064 4.064 25 H 0.227 0.773 26 H 0.132 0.868 27 H -0.179 1.179 28 H -0.176 1.176 29 H 0.179 0.821 30 H 0.249 0.751 31 H 0.088 0.912 32 H 0.087 0.913 33 H 0.106 0.894 34 H 0.089 0.911 35 H 0.139 0.861 36 H 0.140 0.860 37 H 0.139 0.861 38 H 0.139 0.861 39 H 0.139 0.861 40 H 0.093 0.907 41 H 0.107 0.893 42 H 0.166 0.834 Dipole moment (debyes) X Y Z Total from point charges 1.147 2.370 2.466 3.608 hybrid contribution -0.384 -1.798 -0.647 1.949 sum 0.764 0.572 1.820 2.054 Atomic orbital electron populations 1.86513 1.17088 1.81686 1.49289 1.24853 0.85216 1.09903 0.96635 0.94884 0.81174 0.77632 0.87765 1.20917 1.05916 0.94675 1.00200 1.22308 0.91679 0.99174 0.87610 1.67301 1.24990 1.07333 1.23376 1.18439 0.90471 0.88939 0.86969 1.44591 1.59191 1.12212 1.18884 1.21346 0.95893 0.93433 0.87360 1.22817 0.97469 0.98572 0.95773 0.88431 1.23198 0.96233 1.01196 0.95935 1.21488 0.91247 0.98732 0.97719 0.88338 1.19707 0.95194 0.97490 0.94759 1.21083 0.94959 1.00301 0.97173 1.21187 0.94888 0.98155 0.99387 1.21194 1.00068 0.98326 0.94686 1.21179 0.94935 0.99890 0.97597 1.21011 0.94806 0.98406 0.99278 1.22988 0.97223 0.97359 0.97885 1.18011 1.08821 0.79472 0.98503 1.91489 1.93732 1.31109 1.94950 1.21279 0.95510 0.94442 0.95132 0.77300 0.86772 1.17860 1.17607 0.82067 0.75059 0.91179 0.91320 0.89375 0.91083 0.86140 0.86039 0.86097 0.86050 0.86095 0.90714 0.89312 0.83371 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.23 12.84 -35.23 -0.45 -0.23 16 2 C -0.05 0.05 2.82 36.00 0.10 0.15 16 3 Si 0.68 -1.28 29.83 -169.99 -5.07 -6.35 16 4 C -0.21 0.03 5.36 -104.47 -0.56 -0.53 16 5 C 0.15 -0.01 9.84 -17.56 -0.17 -0.18 16 6 N -0.51 -0.86 9.57 -12.37 -0.12 -0.98 16 7 C 0.39 0.65 7.49 -154.86 -1.16 -0.51 16 8 N -0.72 0.01 5.71 -60.34 -0.34 -0.33 16 9 C 0.14 -0.15 5.54 -4.05 -0.02 -0.17 16 10 C -0.13 0.29 3.75 -89.81 -0.34 -0.05 16 11 H 0.10 -0.25 8.14 -51.93 -0.42 -0.68 16 12 C -0.13 0.21 7.01 -25.92 -0.18 0.03 16 13 C -0.07 0.09 3.98 -90.96 -0.36 -0.27 16 14 H 0.10 -0.16 8.09 -51.93 -0.42 -0.58 16 15 C -0.07 -0.03 5.29 -104.62 -0.55 -0.59 16 16 C -0.12 -0.08 9.71 -39.58 -0.38 -0.47 16 17 C -0.12 -0.09 10.05 -39.58 -0.40 -0.49 16 18 C -0.12 -0.10 10.05 -39.59 -0.40 -0.50 16 19 C -0.12 -0.09 10.05 -39.58 -0.40 -0.49 16 20 C -0.12 -0.07 8.61 -39.58 -0.34 -0.41 16 21 C -0.12 0.22 7.11 -25.91 -0.18 0.03 16 22 C -0.02 -0.04 7.35 -39.09 -0.29 -0.33 16 23 F -0.13 -0.32 16.65 2.25 0.04 -0.28 16 24 C -0.04 -0.03 9.82 -39.26 -0.39 -0.42 16 25 H 0.38 -1.61 8.70 45.56 0.40 -1.21 16 26 H 0.11 -0.07 7.96 -51.93 -0.41 -0.49 16 27 H -0.25 -0.11 7.11 56.52 0.40 0.29 16 28 H -0.25 -0.37 7.11 56.52 0.40 0.03 16 29 H 0.16 -0.41 4.90 -52.49 -0.26 -0.67 16 30 H 0.41 -0.41 7.94 -40.82 -0.32 -0.73 16 31 H 0.07 -0.03 8.14 -51.93 -0.42 -0.45 16 32 H 0.07 -0.02 7.85 -51.93 -0.41 -0.43 16 33 H 0.09 -0.10 6.07 -51.92 -0.32 -0.42 16 34 H 0.07 -0.11 8.14 -51.93 -0.42 -0.53 16 35 H 0.12 -0.09 8.05 -52.49 -0.42 -0.52 16 36 H 0.12 -0.10 8.06 -52.48 -0.42 -0.52 16 37 H 0.12 -0.09 8.06 -52.49 -0.42 -0.51 16 38 H 0.12 -0.10 8.06 -52.49 -0.42 -0.52 16 39 H 0.12 -0.08 6.66 -52.49 -0.35 -0.43 16 40 H 0.07 -0.15 8.14 -51.93 -0.42 -0.57 16 41 H 0.09 -0.14 7.68 -51.93 -0.40 -0.54 16 42 H 0.15 0.00 8.06 -52.49 -0.42 -0.42 16 LS Contribution 351.33 15.07 5.29 5.29 Total: 0.00 -5.78 351.33 -12.17 -17.95 By element: Atomic # 1 Polarization: -4.40 SS G_CDS: -5.49 Total: -9.90 kcal Atomic # 6 Polarization: 0.84 SS G_CDS: -6.02 Total: -5.18 kcal Atomic # 7 Polarization: -0.85 SS G_CDS: -0.46 Total: -1.31 kcal Atomic # 8 Polarization: 0.23 SS G_CDS: -0.45 Total: -0.23 kcal Atomic # 9 Polarization: -0.32 SS G_CDS: 0.04 Total: -0.28 kcal Atomic # 14 Polarization: -1.28 SS G_CDS: -5.07 Total: -6.35 kcal Total LS contribution 5.29 Total: 5.29 kcal Total: -5.78 -12.17 -17.95 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_27_12130086_17656566.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 32.604 kcal (2) G-P(sol) polarization free energy of solvation -5.782 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 26.822 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.169 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.951 kcal (6) G-S(sol) free energy of system = (1) + (5) 14.653 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.66 seconds