Wall clock time and date at job start Tue Mar 9 2021 13:04:45 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.34769 * 1 3 3 O 1.21275 * 120.00375 * 2 1 4 4 C 1.50701 * 119.99770 * 180.02562 * 2 1 3 5 5 H 1.09002 * 112.84950 * 48.80195 * 4 2 1 6 6 C 1.53788 * 113.61523 * 179.97438 * 4 2 1 7 7 C 1.53781 * 87.08012 * 89.20013 * 6 4 2 8 8 H 1.09007 * 113.61551 * 270.80031 * 7 6 4 9 9 N 1.46496 * 113.61256 * 139.98360 * 7 6 4 10 10 C 1.38411 * 119.99929 * 155.00225 * 9 7 6 11 11 N 1.32487 * 119.21808 * 179.97438 * 10 9 7 12 12 C 1.32273 * 120.74457 * 179.97438 * 11 10 9 13 13 C 1.38605 * 119.19419 * 0.02562 * 12 11 10 14 14 C 1.50699 * 120.72226 * 179.72488 * 13 12 11 15 15 O 1.42909 * 109.47094 * 64.99741 * 14 13 12 16 16 Si 1.86300 * 109.47443 * 184.99741 * 14 13 12 17 17 C 1.38600 * 118.55909 * 359.97438 * 13 12 11 18 18 N 1.32277 * 119.19790 * 0.02562 * 17 13 12 19 19 C 1.53782 * 113.69224 * 277.53379 * 4 2 1 20 20 H 0.97004 * 120.00595 * 180.02562 * 1 2 3 21 21 H 0.97002 * 120.00231 * 359.97438 * 1 2 3 22 22 H 1.08995 * 113.61054 * 334.65136 * 6 4 2 23 23 H 1.09002 * 113.68814 * 203.75682 * 6 4 2 24 24 H 0.97001 * 120.00401 * 334.99217 * 9 7 6 25 25 H 1.08000 * 120.40821 * 179.97438 * 12 11 10 26 26 H 1.08995 * 109.47481 * 305.00149 * 14 13 12 27 27 H 0.96702 * 113.99998 * 180.02562 * 15 14 13 28 28 H 1.48499 * 109.99883 * 300.00333 * 16 14 13 29 29 H 1.48500 * 109.99738 * 61.31850 * 16 14 13 30 30 H 1.08000 * 120.40289 * 179.97438 * 17 13 12 31 31 H 1.08994 * 113.61897 * 156.32869 * 19 4 2 32 32 H 1.09001 * 113.61406 * 25.41717 * 19 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.3477 0.0000 0.0000 3 8 1.9541 1.0502 0.0000 4 6 2.1011 -1.3051 -0.0006 5 1 1.7398 -2.0022 -0.7567 6 6 3.6295 -1.1342 -0.0011 7 6 3.5499 -1.1219 1.5346 8 1 3.4024 -0.1276 1.9563 9 7 4.6357 -1.8601 2.1844 10 6 5.0153 -1.5382 3.4759 11 7 5.9989 -2.2161 4.0488 12 6 6.3865 -1.9335 5.2815 13 6 5.7500 -0.9152 5.9736 14 6 6.1595 -0.5683 7.3818 15 8 7.4971 -0.0652 7.3786 16 14 5.0093 0.7301 8.0612 17 6 4.7251 -0.2262 5.3444 18 7 4.3865 -0.5593 4.1098 19 6 2.2502 -1.9332 1.3952 20 1 -0.4851 -0.8400 0.0004 21 1 -0.4850 0.8400 0.0004 22 1 3.9628 -0.1886 -0.4286 23 1 4.1661 -1.9934 -0.4037 24 1 5.0885 -2.5746 1.7096 25 1 7.1886 -2.4899 5.7434 26 1 6.1087 -1.4609 8.0053 27 1 7.8277 0.1786 8.2540 28 1 5.0694 1.9523 7.2199 29 1 3.6197 0.2078 8.0995 30 1 4.2085 0.5723 5.8561 31 1 2.4087 -3.0114 1.3742 32 1 1.4703 -1.6325 2.0948 There are 45 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 45 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_27_12220718_12175864.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:04:45 Heat of formation + Delta-G solvation = 16.241564 kcal Electronic energy + Delta-G solvation = -18023.990723 eV Core-core repulsion = 14987.300085 eV Total energy + Delta-G solvation = -3036.690639 eV No. of doubly occupied orbitals = 45 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 251.106 amu Computer time = 0.35 seconds Orbital eigenvalues (eV) -42.30941 -41.49600 -38.94036 -37.83415 -35.63870 -34.90865 -34.67349 -32.34768 -27.63664 -26.82670 -26.22930 -25.74740 -23.29934 -22.66083 -20.48642 -19.51294 -19.05250 -18.32061 -18.09495 -17.76218 -16.87698 -16.67595 -16.31705 -16.07718 -15.64288 -15.50504 -15.18746 -14.82896 -14.44687 -14.10997 -13.76978 -13.43629 -13.22035 -12.99902 -12.36958 -12.17093 -12.06499 -11.82989 -11.69879 -11.27576 -11.05164 -10.73829 -10.60902 -10.05980 -9.22341 -4.98581 -0.15905 -0.02151 1.29242 1.49631 1.62925 1.70859 1.95322 2.48928 2.59982 2.92056 3.32604 3.36084 3.40931 3.44712 3.59456 3.69529 3.84333 3.86831 4.07737 4.22950 4.45972 4.51447 4.61385 4.62507 4.72699 4.81053 4.92512 4.98779 5.23077 5.62095 5.80880 5.87426 6.28773 6.39174 6.95881 7.11772 7.27008 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.836 5.836 2 C 0.524 3.476 3 O -0.593 6.593 4 C -0.128 4.128 5 H 0.147 0.853 6 C -0.123 4.123 7 C 0.127 3.873 8 H 0.088 0.912 9 N -0.674 5.674 10 C 0.550 3.450 11 N -0.580 5.580 12 C 0.220 3.780 13 C -0.252 4.252 14 C -0.051 4.051 15 O -0.565 6.565 16 Si 0.769 3.231 17 C 0.173 3.827 18 N -0.586 5.586 19 C -0.121 4.121 20 H 0.419 0.581 21 H 0.406 0.594 22 H 0.066 0.934 23 H 0.124 0.876 24 H 0.424 0.576 25 H 0.199 0.801 26 H 0.107 0.893 27 H 0.406 0.594 28 H -0.301 1.301 29 H -0.287 1.287 30 H 0.157 0.843 31 H 0.120 0.880 32 H 0.071 0.929 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.353 -5.238 3.535 6.743 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.399 5.399 2 C 0.310 3.690 3 O -0.473 6.473 4 C -0.149 4.149 5 H 0.165 0.835 6 C -0.162 4.162 7 C 0.022 3.978 8 H 0.106 0.894 9 N -0.311 5.311 10 C 0.193 3.807 11 N -0.302 5.302 12 C 0.052 3.948 13 C -0.260 4.260 14 C -0.162 4.162 15 O -0.375 6.375 16 Si 0.676 3.324 17 C 0.006 3.994 18 N -0.309 5.309 19 C -0.161 4.161 20 H 0.251 0.749 21 H 0.237 0.763 22 H 0.085 0.915 23 H 0.142 0.858 24 H 0.263 0.737 25 H 0.216 0.784 26 H 0.124 0.876 27 H 0.258 0.742 28 H -0.229 1.229 29 H -0.214 1.214 30 H 0.174 0.826 31 H 0.138 0.862 32 H 0.090 0.910 Dipole moment (debyes) X Y Z Total from point charges -3.012 -4.436 1.696 5.623 hybrid contribution -0.098 0.012 0.165 0.193 sum -3.110 -4.424 1.861 5.718 Atomic orbital electron populations 1.43734 1.06259 1.13867 1.76036 1.20594 0.83520 0.90822 0.74092 1.90760 1.69437 1.35418 1.51728 1.22186 0.96280 0.94936 1.01532 0.83495 1.23300 0.94727 1.04235 0.93934 1.22681 0.86369 0.95919 0.92878 0.89435 1.44225 1.38337 1.39144 1.09393 1.19715 0.86430 0.86201 0.88338 1.68057 1.16637 1.31731 1.13727 1.23348 0.93899 0.90626 0.86926 1.21066 1.02141 1.02587 1.00228 1.24376 0.91729 1.06702 0.93441 1.86445 1.27702 1.86110 1.37291 0.94274 0.75801 0.75495 0.86820 1.22837 0.92510 0.94901 0.89131 1.67879 1.33111 1.18952 1.10935 1.23429 0.96907 1.01675 0.94057 0.74917 0.76296 0.91524 0.85789 0.73653 0.78410 0.87560 0.74223 1.22892 1.21445 0.82611 0.86194 0.91044 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.84 3.48 8.87 -173.54 -1.54 1.94 16 2 C 0.52 1.78 7.36 87.66 0.65 2.42 16 3 O -0.59 -8.57 16.59 -3.01 -0.05 -8.62 16 4 C -0.13 0.39 4.34 -11.01 -0.05 0.35 16 5 H 0.15 -1.46 8.14 -2.39 -0.02 -1.48 16 6 C -0.12 -0.01 7.21 31.12 0.22 0.22 16 7 C 0.13 0.52 3.90 45.54 0.18 0.70 16 8 H 0.09 1.05 7.30 -2.38 -0.02 1.03 16 9 N -0.67 -3.26 5.50 -327.83 -1.80 -5.07 16 10 C 0.55 5.85 8.43 261.49 2.20 8.05 16 11 N -0.58 -5.43 10.46 -197.99 -2.07 -7.50 16 12 C 0.22 1.23 10.99 84.71 0.93 2.16 16 13 C -0.25 -1.42 5.40 -19.69 -0.11 -1.52 16 14 C -0.05 0.10 2.82 71.24 0.20 0.30 16 15 O -0.57 1.06 12.82 -148.98 -1.91 -0.85 16 16 Si 0.77 -1.83 29.92 68.60 2.05 0.22 16 17 C 0.17 1.71 9.92 84.71 0.84 2.55 16 18 N -0.59 -7.59 9.13 -197.99 -1.81 -9.40 16 19 C -0.12 0.30 7.47 31.14 0.23 0.53 16 20 H 0.42 -4.64 8.83 -92.71 -0.82 -5.46 16 21 H 0.41 -1.77 8.93 -92.71 -0.83 -2.59 16 22 H 0.07 0.39 7.43 -2.39 -0.02 0.37 16 23 H 0.12 -0.71 8.12 -2.39 -0.02 -0.72 16 24 H 0.42 0.18 8.84 -92.71 -0.82 -0.64 16 25 H 0.20 -0.18 8.06 -2.91 -0.02 -0.20 16 26 H 0.11 -0.81 7.96 -2.39 -0.02 -0.83 16 27 H 0.41 -5.12 8.74 -74.06 -0.65 -5.77 16 28 H -0.30 -1.86 7.06 99.48 0.70 -1.16 16 29 H -0.29 -0.90 7.11 99.48 0.71 -0.20 16 30 H 0.16 1.27 5.04 -2.91 -0.01 1.25 16 31 H 0.12 -0.76 8.14 -2.39 -0.02 -0.78 16 32 H 0.07 -0.06 8.10 -2.39 -0.02 -0.08 16 Total: 0.00 -27.08 278.93 -3.70 -30.78 By element: Atomic # 1 Polarization: -15.38 SS G_CDS: -1.87 Total: -17.26 kcal Atomic # 6 Polarization: 10.46 SS G_CDS: 5.30 Total: 15.76 kcal Atomic # 7 Polarization: -12.81 SS G_CDS: -7.22 Total: -20.03 kcal Atomic # 8 Polarization: -7.51 SS G_CDS: -1.96 Total: -9.47 kcal Atomic # 14 Polarization: -1.83 SS G_CDS: 2.05 Total: 0.22 kcal Total: -27.08 -3.70 -30.78 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_27_12220718_12175864.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 47.023 kcal (2) G-P(sol) polarization free energy of solvation -27.078 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 19.944 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -3.703 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -30.781 kcal (6) G-S(sol) free energy of system = (1) + (5) 16.242 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.36 seconds