Wall clock time and date at job start Tue Mar 9 2021 13:04:51 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50701 * 1 3 3 C 1.33332 * 125.94845 * 2 1 4 4 C 1.50698 * 122.71049 * 359.97438 * 3 2 1 5 5 O 1.42901 * 109.47004 * 30.00022 * 4 3 2 6 6 Si 1.86298 * 109.47327 * 149.99737 * 4 3 2 7 7 N 1.32122 * 114.57717 * 179.75306 * 3 2 1 8 8 C 1.29683 * 116.86660 * 0.46977 * 7 3 2 9 9 N 1.38606 * 124.94924 * 179.81324 * 8 7 3 10 10 C 1.46506 * 119.99884 * 179.72091 * 9 8 7 11 11 H 1.08993 * 112.85127 * 336.19897 * 10 9 8 12 12 C 1.53786 * 113.61017 * 107.50808 * 10 9 8 13 13 C 1.53780 * 87.08292 * 89.11397 * 12 10 9 14 14 H 1.08992 * 113.69153 * 270.87353 * 13 12 10 15 15 C 1.50696 * 113.61396 * 139.97857 * 13 12 10 16 16 N 1.34778 * 120.00287 * 82.50126 * 15 13 12 17 17 O 1.21286 * 119.99871 * 262.50502 * 15 13 12 18 18 C 1.53780 * 113.61267 * 205.00015 * 10 9 8 19 19 S 1.70974 * 110.10199 * 359.55370 * 8 7 3 20 20 H 1.09002 * 109.46908 * 180.02562 * 1 2 3 21 21 H 1.08996 * 109.47555 * 300.02362 * 1 2 3 22 22 H 1.09000 * 109.47244 * 60.02590 * 1 2 3 23 23 H 1.09002 * 109.47357 * 269.99991 * 4 3 2 24 24 H 0.96695 * 114.00408 * 59.99874 * 5 4 3 25 25 H 1.48509 * 109.99732 * 58.68194 * 6 4 3 26 26 H 1.48500 * 110.00238 * 179.97438 * 6 4 3 27 27 H 0.96995 * 120.00007 * 359.97438 * 9 8 7 28 28 H 1.09002 * 113.60822 * 203.66522 * 12 10 9 29 29 H 1.08998 * 113.61367 * 334.56303 * 12 10 9 30 30 H 0.97000 * 119.99259 * 0.02562 * 16 15 13 31 31 H 0.96998 * 120.00332 * 180.02562 * 16 15 13 32 32 H 1.09001 * 113.61558 * 25.44031 * 18 10 9 33 33 H 1.08997 * 113.61463 * 156.33765 * 18 10 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2897 1.0794 0.0000 4 6 1.7413 2.4830 -0.0006 5 8 0.4810 2.5022 0.6726 6 14 2.9318 3.6153 0.8778 7 7 3.5850 0.8189 0.0052 8 6 3.9315 -0.4308 0.0001 9 7 5.2385 -0.8924 0.0005 10 6 5.5066 -2.3327 0.0005 11 1 4.6805 -2.9170 0.4055 12 6 6.0366 -2.8606 -1.3432 13 6 7.4480 -2.5438 -0.8214 14 1 7.7805 -1.5303 -1.0455 15 6 8.4729 -3.5887 -1.1801 16 7 9.0591 -3.5691 -2.3936 17 8 8.7701 -4.4475 -0.3769 18 6 6.8746 -2.7046 0.5965 19 16 2.5413 -1.4260 0.0000 20 1 -0.3633 -1.0277 0.0005 21 1 -0.3634 0.5142 0.8897 22 1 -0.3634 0.5134 -0.8902 23 1 1.6095 2.8212 -1.0284 24 1 0.5228 2.2126 1.5942 25 1 4.2558 3.5799 0.2062 26 1 2.4027 5.0028 0.8836 27 1 5.9755 -0.2619 0.0045 28 1 5.8561 -3.9246 -1.4959 29 1 5.7406 -2.2530 -2.1983 30 1 8.8216 -2.8820 -3.0358 31 1 9.7185 -4.2419 -2.6246 32 1 7.2552 -1.9710 1.3072 33 1 6.9233 -3.7259 0.9739 There are 46 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 46 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV m_27_12220718_15704122.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:04:51 Heat of formation + Delta-G solvation = 6.280965 kcal Electronic energy + Delta-G solvation = -18285.509609 eV Core-core repulsion = 15247.427585 eV Total energy + Delta-G solvation = -3038.082024 eV No. of doubly occupied orbitals = 46 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 270.082 amu Computer time = 0.32 seconds Orbital eigenvalues (eV) -41.65545 -40.93269 -39.21872 -37.69553 -35.17444 -34.65906 -32.46125 -29.35714 -27.35855 -27.01521 -25.56160 -24.34586 -22.61929 -20.83843 -20.53826 -18.98813 -18.58362 -17.95931 -17.81836 -17.20925 -16.74543 -16.56127 -15.94617 -15.73190 -15.56345 -15.26153 -14.72045 -14.24447 -14.14689 -13.75389 -13.72673 -13.52151 -13.44176 -12.99999 -12.69810 -12.35919 -11.97572 -11.90146 -11.78738 -11.10050 -10.88828 -10.76604 -10.57487 -10.33994 -9.97378 -8.65736 -4.84534 0.01381 0.17058 0.77976 1.38867 1.51775 1.75452 1.88740 1.93798 2.24659 2.43893 3.11091 3.18609 3.35653 3.43406 3.54528 3.63442 3.99913 4.13767 4.20155 4.33779 4.44137 4.50044 4.55484 4.61325 4.70923 4.81094 4.86729 4.90899 5.09521 5.30202 5.57259 5.69782 6.20507 6.23511 6.49766 6.94698 7.18227 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 C -0.237 4.237 3 C 0.064 3.936 4 C -0.033 4.033 5 O -0.536 6.536 6 Si 0.716 3.284 7 N -0.543 5.543 8 C 0.318 3.682 9 N -0.678 5.678 10 C 0.126 3.874 11 H 0.103 0.897 12 C -0.138 4.138 13 C -0.141 4.141 14 H 0.115 0.885 15 C 0.527 3.473 16 N -0.854 5.854 17 O -0.540 6.540 18 C -0.118 4.118 19 S 0.104 5.896 20 H 0.058 0.942 21 H 0.083 0.917 22 H 0.075 0.925 23 H 0.120 0.880 24 H 0.379 0.621 25 H -0.253 1.253 26 H -0.262 1.262 27 H 0.413 0.587 28 H 0.101 0.899 29 H 0.085 0.915 30 H 0.402 0.598 31 H 0.403 0.597 32 H 0.085 0.915 33 H 0.115 0.885 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.040 -0.986 -0.681 1.199 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.119 4.119 2 C -0.360 4.360 3 C -0.066 4.066 4 C -0.146 4.146 5 O -0.340 6.340 6 Si 0.617 3.383 7 N -0.269 5.269 8 C -0.053 4.053 9 N -0.318 5.318 10 C 0.020 3.980 11 H 0.120 0.880 12 C -0.178 4.178 13 C -0.163 4.163 14 H 0.133 0.867 15 C 0.311 3.689 16 N -0.417 5.417 17 O -0.416 6.416 18 C -0.157 4.157 19 S 0.354 5.646 20 H 0.077 0.923 21 H 0.102 0.898 22 H 0.093 0.907 23 H 0.137 0.863 24 H 0.226 0.774 25 H -0.177 1.177 26 H -0.188 1.188 27 H 0.251 0.749 28 H 0.120 0.880 29 H 0.103 0.897 30 H 0.231 0.769 31 H 0.233 0.767 32 H 0.104 0.896 33 H 0.134 0.866 Dipole moment (debyes) X Y Z Total from point charges 0.612 -1.412 -0.667 1.677 hybrid contribution 0.251 0.776 -1.217 1.465 sum 0.862 -0.636 -1.883 2.167 Atomic orbital electron populations 1.20159 0.86327 1.01689 1.03765 1.25182 1.01368 0.92772 1.16630 1.20109 0.86710 0.97198 1.02602 1.24516 0.92365 0.95512 1.02207 1.86524 1.28893 1.89572 1.29037 0.94060 0.77552 0.76488 0.90196 1.65958 1.17332 1.16646 1.26944 1.23233 0.91640 0.91562 0.98826 1.43566 1.01924 1.06025 1.80270 1.21936 0.98950 0.79948 0.97187 0.87952 1.23476 0.92895 1.03006 0.98374 1.22833 0.94391 0.99365 0.99671 0.86684 1.20410 0.81275 0.85593 0.81597 1.43911 1.45791 1.35208 1.16815 1.90774 1.63190 1.38273 1.49361 1.23247 0.92650 1.04772 0.95030 1.84015 0.96382 1.10409 1.73834 0.92331 0.89836 0.90672 0.86327 0.77351 1.17688 1.18762 0.74871 0.88040 0.89684 0.76936 0.76655 0.89640 0.86641 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.06 0.03 8.91 36.01 0.32 0.35 16 2 C -0.24 -0.26 6.50 -36.02 -0.23 -0.50 16 3 C 0.06 0.12 5.92 -84.18 -0.50 -0.38 16 4 C -0.03 -0.03 2.94 36.00 0.11 0.08 16 5 O -0.54 0.08 10.17 -35.23 -0.36 -0.28 16 6 Si 0.72 0.57 32.08 -169.99 -5.45 -4.88 16 7 N -0.54 -1.43 8.94 -11.36 -0.10 -1.53 16 8 C 0.32 0.33 8.24 -87.69 -0.72 -0.39 16 9 N -0.68 0.89 5.42 -54.99 -0.30 0.59 16 10 C 0.13 -0.32 4.31 -67.11 -0.29 -0.61 16 11 H 0.10 -0.26 7.06 -51.93 -0.37 -0.63 16 12 C -0.14 0.43 7.43 -25.92 -0.19 0.24 16 13 C -0.14 0.38 4.03 -90.96 -0.37 0.02 16 14 H 0.12 -0.49 8.14 -51.93 -0.42 -0.91 16 15 C 0.53 -0.03 7.63 -10.99 -0.08 -0.11 16 16 N -0.85 2.52 8.87 31.22 0.28 2.79 16 17 O -0.54 -2.47 16.74 5.55 0.09 -2.37 16 18 C -0.12 0.26 7.15 -25.92 -0.19 0.08 16 19 S 0.10 0.03 21.69 -107.50 -2.33 -2.30 16 20 H 0.06 -0.06 8.14 -51.93 -0.42 -0.48 16 21 H 0.08 -0.13 6.39 -51.93 -0.33 -0.46 16 22 H 0.07 0.02 8.14 -51.93 -0.42 -0.41 16 23 H 0.12 0.16 7.96 -51.93 -0.41 -0.26 16 24 H 0.38 -1.37 8.13 45.56 0.37 -1.00 16 25 H -0.25 -1.05 7.11 56.52 0.40 -0.65 16 26 H -0.26 -0.85 7.11 56.52 0.40 -0.45 16 27 H 0.41 -0.82 8.83 -40.82 -0.36 -1.18 16 28 H 0.10 -0.30 8.09 -51.93 -0.42 -0.72 16 29 H 0.08 -0.27 8.14 -51.93 -0.42 -0.69 16 30 H 0.40 -2.25 8.83 -40.82 -0.36 -2.61 16 31 H 0.40 -1.27 8.93 -40.82 -0.36 -1.63 16 32 H 0.08 -0.21 8.14 -51.93 -0.42 -0.64 16 33 H 0.12 -0.11 7.43 -51.93 -0.39 -0.50 16 LS Contribution 293.54 15.07 4.42 4.42 Total: 0.00 -8.18 293.54 -9.84 -18.02 By element: Atomic # 1 Polarization: -9.28 SS G_CDS: -3.94 Total: -13.23 kcal Atomic # 6 Polarization: 0.92 SS G_CDS: -2.15 Total: -1.23 kcal Atomic # 7 Polarization: 1.97 SS G_CDS: -0.12 Total: 1.85 kcal Atomic # 8 Polarization: -2.39 SS G_CDS: -0.27 Total: -2.65 kcal Atomic # 14 Polarization: 0.57 SS G_CDS: -5.45 Total: -4.88 kcal Atomic # 16 Polarization: 0.03 SS G_CDS: -2.33 Total: -2.30 kcal Total LS contribution 4.42 Total: 4.42 kcal Total: -8.18 -9.84 -18.02 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_27_12220718_15704122.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 24.300 kcal (2) G-P(sol) polarization free energy of solvation -8.180 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 16.120 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.839 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.019 kcal (6) G-S(sol) free energy of system = (1) + (5) 6.281 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.32 seconds