Wall clock time and date at job start Tue Mar 9 2021 14:31:05 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52999 * 1 3 3 C 1.53002 * 109.47071 * 2 1 4 4 C 1.52995 * 109.47157 * 239.99892 * 2 1 3 5 5 O 1.45202 * 109.47039 * 119.99498 * 2 1 3 6 6 C 1.34641 * 116.99839 * 60.00288 * 5 2 1 7 7 O 1.21511 * 120.00195 * 0.02562 * 6 5 2 8 8 N 1.34779 * 120.00092 * 179.97438 * 6 5 2 9 9 C 1.46500 * 120.00157 * 179.97438 * 8 6 5 10 10 C 1.52997 * 109.47028 * 180.02562 * 9 8 6 11 11 F 1.39904 * 112.91005 * 48.74857 * 10 9 8 12 12 C 1.53784 * 113.61330 * 179.97438 * 10 9 8 13 13 C 1.53787 * 87.07923 * 139.97966 * 12 10 9 14 14 H 1.08998 * 113.61103 * 89.12089 * 13 12 10 15 15 N 1.46499 * 113.61131 * 219.93470 * 13 12 10 16 16 C 1.38619 * 119.99569 * 205.00410 * 15 13 12 17 17 N 1.29688 * 124.94912 * 0.02562 * 16 15 13 18 18 C 1.32123 * 116.86449 * 179.97438 * 17 16 15 19 19 C 1.33330 * 114.57809 * 0.02562 * 18 17 16 20 20 C 1.50697 * 125.94953 * 179.97438 * 19 18 17 21 21 O 1.42896 * 109.47355 * 65.00188 * 20 19 18 22 22 Si 1.86305 * 109.47148 * 184.99954 * 20 19 18 23 23 S 1.70969 * 124.94344 * 179.72250 * 16 15 13 24 24 C 1.53778 * 87.08035 * 334.56830 * 13 12 10 25 25 H 1.09004 * 109.47211 * 300.00101 * 1 2 3 26 26 H 1.08990 * 109.47448 * 60.00281 * 1 2 3 27 27 H 1.08997 * 109.46856 * 180.02562 * 1 2 3 28 28 H 1.09004 * 109.46950 * 180.02562 * 3 2 1 29 29 H 1.09001 * 109.47029 * 299.99732 * 3 2 1 30 30 H 1.08994 * 109.47298 * 59.99794 * 3 2 1 31 31 H 1.09007 * 109.46812 * 299.99416 * 4 2 1 32 32 H 1.08996 * 109.47517 * 59.99662 * 4 2 1 33 33 H 1.09001 * 109.46947 * 180.02562 * 4 2 1 34 34 H 0.96999 * 119.99872 * 0.02562 * 8 6 5 35 35 H 1.09002 * 109.47037 * 60.00029 * 9 8 6 36 36 H 1.08997 * 109.47129 * 300.00403 * 9 8 6 37 37 H 1.09004 * 113.61451 * 25.43452 * 12 10 9 38 38 H 1.08994 * 113.61477 * 254.52754 * 12 10 9 39 39 H 0.96993 * 120.00646 * 25.00150 * 15 13 12 40 40 H 1.07991 * 122.70968 * 179.97438 * 18 17 16 41 41 H 1.08997 * 109.47025 * 304.99871 * 20 19 18 42 42 H 0.96698 * 114.00550 * 180.02562 * 21 20 19 43 43 H 1.48496 * 109.99993 * 178.68320 * 22 20 19 44 44 H 1.48502 * 109.99842 * 300.00290 * 22 20 19 45 45 H 1.08999 * 113.61111 * 139.98327 * 24 13 12 46 46 H 1.08999 * 113.61280 * 270.79710 * 24 13 12 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 6 2.0400 -0.7212 -1.2492 5 8 2.0140 -0.6844 1.1856 6 6 1.6522 -1.9722 1.3385 7 8 0.9517 -2.5097 0.5037 8 7 2.0680 -2.6656 2.4168 9 6 1.6739 -4.0668 2.5834 10 6 2.2741 -4.6146 3.8797 11 9 2.0571 -3.7752 4.9777 12 6 1.9178 -6.0861 4.1498 13 6 3.3647 -6.2647 4.6394 14 1 3.4941 -6.0616 5.7024 15 7 3.9725 -7.5312 4.2240 16 6 5.0093 -8.0780 4.9641 17 7 5.5142 -7.5521 6.0367 18 6 6.5011 -8.2115 6.6173 19 6 6.8452 -9.3456 6.0065 20 6 7.9318 -10.2927 6.4460 21 8 7.5831 -10.8651 7.7080 22 14 8.1238 -11.6473 5.1814 23 16 5.8036 -9.5475 4.6000 24 6 3.7338 -5.0764 3.7358 25 1 -0.3634 0.5139 0.8900 26 1 -0.3634 0.5137 -0.8899 27 1 -0.3633 -1.0277 0.0005 28 1 3.1300 1.4425 -0.0005 29 1 1.6767 1.9563 -0.8900 30 1 1.6767 1.9564 0.8899 31 1 1.6767 -1.7490 -1.2491 32 1 1.6767 -0.2075 -2.1392 33 1 3.1300 -0.7216 -1.2489 34 1 2.6275 -2.2367 3.0830 35 1 2.0397 -4.6500 1.7383 36 1 0.5871 -4.1355 2.6291 37 1 1.6892 -6.6528 3.2472 38 1 1.1722 -6.2179 4.9338 39 1 3.6496 -7.9872 3.4312 40 1 6.9900 -7.8598 7.5136 41 1 8.8715 -9.7485 6.5410 42 1 8.2391 -11.4861 8.0530 43 1 9.2140 -12.5702 5.5874 44 1 6.8493 -12.3967 5.0425 45 1 4.4543 -4.3932 4.1855 46 1 4.0031 -5.3672 2.7204 There are 64 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 64 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV m_27_15734574_15704118.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 14:31:05 Heat of formation + Delta-G solvation = -76.662692 kcal Electronic energy + Delta-G solvation = -29571.350394 eV Core-core repulsion = 25119.385019 eV Total energy + Delta-G solvation = -4451.965375 eV No. of doubly occupied orbitals = 64 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 360.135 amu Computer time = 0.83 seconds Orbital eigenvalues (eV) -48.95505 -41.70201 -40.87673 -39.84728 -38.37454 -37.91414 -36.08329 -35.19712 -34.56264 -31.43398 -29.30345 -28.32027 -28.28561 -27.30502 -26.63177 -25.05352 -23.75927 -22.84493 -21.51747 -20.91939 -20.60689 -19.49073 -19.22639 -18.60030 -17.86284 -17.62142 -17.39549 -17.13664 -17.00648 -16.51663 -16.12009 -15.96181 -15.73377 -15.61149 -15.47675 -15.37240 -15.14209 -14.69364 -14.55230 -14.38540 -14.11270 -13.96038 -13.77924 -13.40871 -13.23385 -13.09404 -13.00065 -12.84967 -12.82371 -12.77994 -12.44395 -12.38936 -12.31266 -12.27982 -11.90103 -11.59362 -11.29824 -11.20355 -11.00165 -10.70585 -10.30238 -10.27268 -10.17643 -8.77640 -5.08708 -0.06753 0.03969 0.68023 1.11411 1.21025 1.50978 1.86458 1.87713 2.01374 2.05672 2.78355 2.83457 3.03444 3.18417 3.32568 3.38353 3.41875 3.67007 3.78056 3.83575 3.94840 3.97649 4.07186 4.21232 4.28953 4.37327 4.38473 4.42325 4.57033 4.63308 4.63769 4.67148 4.72413 4.76544 4.78914 4.87272 4.91073 4.93431 5.06024 5.13343 5.16998 5.36508 5.43306 5.57971 5.76240 5.98247 6.34396 6.38311 6.99238 7.38006 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.184 4.184 2 C 0.136 3.864 3 C -0.142 4.142 4 C -0.184 4.184 5 O -0.363 6.363 6 C 0.653 3.347 7 O -0.566 6.566 8 N -0.711 5.711 9 C 0.134 3.866 10 C 0.085 3.915 11 F -0.179 7.179 12 C -0.157 4.157 13 C 0.146 3.854 14 H 0.126 0.874 15 N -0.682 5.682 16 C 0.321 3.679 17 N -0.547 5.547 18 C 0.118 3.882 19 C -0.258 4.258 20 C -0.019 4.019 21 O -0.535 6.535 22 Si 0.650 3.350 23 S 0.100 5.900 24 C -0.168 4.168 25 H 0.060 0.940 26 H 0.072 0.928 27 H 0.087 0.913 28 H 0.067 0.933 29 H 0.082 0.918 30 H 0.067 0.933 31 H 0.087 0.913 32 H 0.072 0.928 33 H 0.060 0.940 34 H 0.410 0.590 35 H 0.093 0.907 36 H 0.085 0.915 37 H 0.110 0.890 38 H 0.097 0.903 39 H 0.416 0.584 40 H 0.176 0.824 41 H 0.085 0.915 42 H 0.381 0.619 43 H -0.241 1.241 44 H -0.239 1.239 45 H 0.091 0.909 46 H 0.106 0.894 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.592 -0.463 -2.826 3.862 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.241 4.241 2 C 0.100 3.900 3 C -0.199 4.199 4 C -0.241 4.241 5 O -0.277 6.277 6 C 0.406 3.594 7 O -0.455 6.455 8 N -0.371 5.371 9 C 0.011 3.989 10 C 0.066 3.934 11 F -0.159 7.159 12 C -0.197 4.197 13 C 0.038 3.962 14 H 0.144 0.856 15 N -0.321 5.321 16 C -0.049 4.049 17 N -0.272 5.272 18 C -0.033 4.033 19 C -0.381 4.381 20 C -0.132 4.132 21 O -0.342 6.342 22 Si 0.549 3.451 23 S 0.350 5.650 24 C -0.208 4.208 25 H 0.079 0.921 26 H 0.091 0.909 27 H 0.105 0.895 28 H 0.086 0.914 29 H 0.101 0.899 30 H 0.087 0.913 31 H 0.105 0.895 32 H 0.091 0.909 33 H 0.079 0.921 34 H 0.246 0.754 35 H 0.111 0.889 36 H 0.103 0.897 37 H 0.128 0.872 38 H 0.116 0.884 39 H 0.254 0.746 40 H 0.193 0.807 41 H 0.103 0.897 42 H 0.229 0.771 43 H -0.164 1.164 44 H -0.162 1.162 45 H 0.110 0.890 46 H 0.125 0.875 Dipole moment (debyes) X Y Z Total from point charges 1.297 -1.251 -4.032 4.416 hybrid contribution 0.689 0.117 1.978 2.098 sum 1.986 -1.134 -2.054 3.074 Atomic orbital electron populations 1.22523 0.93810 1.05040 1.02773 1.22139 0.94484 0.91595 0.81796 1.21881 1.02357 0.92307 1.03378 1.22522 1.01615 1.03414 0.96548 1.86316 1.71414 1.23247 1.46772 1.18013 0.78696 0.80724 0.81939 1.90925 1.40906 1.70512 1.43164 1.44470 1.56131 1.12189 1.24293 1.21729 1.01227 0.80254 0.95691 1.21800 0.98431 0.89510 0.83704 1.92918 1.95645 1.72570 1.54814 1.24006 0.98194 0.93400 1.04067 1.22483 0.91153 0.81963 1.00599 0.85607 1.43920 1.34570 1.24387 1.29227 1.23713 0.93761 0.94195 0.93212 1.66465 1.15566 1.35097 1.10062 1.21309 0.92360 0.90457 0.99181 1.24346 1.08252 1.02881 1.02573 1.23715 0.96055 1.01180 0.92265 1.86619 1.50296 1.63001 1.34316 0.95227 0.82678 0.80666 0.86556 1.84000 1.31147 1.21108 1.28761 1.24252 0.95155 0.98697 1.02690 0.92071 0.90888 0.89454 0.91367 0.89901 0.91348 0.89455 0.90891 0.92097 0.75415 0.88890 0.89652 0.87160 0.88440 0.74628 0.80724 0.89732 0.77079 1.16436 1.16248 0.89032 0.87513 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.25 8.37 37.16 0.31 0.07 16 2 C 0.14 0.18 1.13 -90.62 -0.10 0.08 16 3 C -0.14 0.09 8.85 37.16 0.33 0.42 16 4 C -0.18 -0.20 8.37 37.16 0.31 0.11 16 5 O -0.36 -0.92 9.94 -40.33 -0.40 -1.32 16 6 C 0.65 1.77 8.06 54.06 0.44 2.20 16 7 O -0.57 -2.66 11.88 -19.28 -0.23 -2.88 16 8 N -0.71 -0.04 5.47 -65.28 -0.36 -0.40 16 9 C 0.13 -0.22 5.37 -4.04 -0.02 -0.25 16 10 C 0.09 -0.20 1.67 -89.81 -0.15 -0.35 16 11 F -0.18 -0.06 16.80 2.25 0.04 -0.02 16 12 C -0.16 0.56 7.29 -25.91 -0.19 0.37 16 13 C 0.15 -0.28 4.33 -67.12 -0.29 -0.57 16 14 H 0.13 0.04 7.66 -51.93 -0.40 -0.36 16 15 N -0.68 1.22 5.52 -54.99 -0.30 0.92 16 16 C 0.32 0.32 8.09 -87.67 -0.71 -0.39 16 17 N -0.55 -1.60 9.83 -15.20 -0.15 -1.75 16 18 C 0.12 0.27 11.24 -19.14 -0.22 0.05 16 19 C -0.26 -0.38 5.76 -36.02 -0.21 -0.58 16 20 C -0.02 0.00 2.98 36.00 0.11 0.11 16 21 O -0.53 -0.53 12.85 -35.23 -0.45 -0.98 16 22 Si 0.65 -0.51 31.07 -169.99 -5.28 -5.79 16 23 S 0.10 0.03 20.59 -107.50 -2.21 -2.18 16 24 C -0.17 0.45 7.32 -25.92 -0.19 0.26 16 25 H 0.06 0.07 8.14 -51.93 -0.42 -0.35 16 26 H 0.07 -0.01 8.14 -51.93 -0.42 -0.43 16 27 H 0.09 0.29 5.88 -51.93 -0.31 -0.01 16 28 H 0.07 -0.05 8.14 -51.93 -0.42 -0.47 16 29 H 0.08 -0.17 8.14 -51.93 -0.42 -0.59 16 30 H 0.07 -0.04 8.14 -51.93 -0.42 -0.47 16 31 H 0.09 0.27 5.88 -51.92 -0.31 -0.04 16 32 H 0.07 -0.02 8.14 -51.93 -0.42 -0.44 16 33 H 0.06 0.05 8.14 -51.93 -0.42 -0.37 16 34 H 0.41 -0.39 8.30 -40.82 -0.34 -0.73 16 35 H 0.09 -0.23 7.95 -51.93 -0.41 -0.65 16 36 H 0.09 -0.09 8.14 -51.93 -0.42 -0.52 16 37 H 0.11 -0.61 8.08 -51.93 -0.42 -1.03 16 38 H 0.10 -0.30 8.14 -51.93 -0.42 -0.72 16 39 H 0.42 -1.76 8.85 -40.82 -0.36 -2.12 16 40 H 0.18 0.16 8.06 -52.49 -0.42 -0.26 16 41 H 0.08 -0.18 7.96 -51.93 -0.41 -0.59 16 42 H 0.38 -1.21 8.74 45.56 0.40 -0.81 16 43 H -0.24 -0.14 7.11 56.52 0.40 0.26 16 44 H -0.24 -0.54 7.11 56.52 0.40 -0.14 16 45 H 0.09 -0.15 8.14 -51.93 -0.42 -0.58 16 46 H 0.11 -0.40 7.97 -51.93 -0.41 -0.81 16 LS Contribution 393.73 15.07 5.93 5.93 Total: 0.00 -8.37 393.73 -10.81 -19.18 By element: Atomic # 1 Polarization: -5.43 SS G_CDS: -6.82 Total: -12.24 kcal Atomic # 6 Polarization: 2.12 SS G_CDS: -0.58 Total: 1.54 kcal Atomic # 7 Polarization: -0.42 SS G_CDS: -0.81 Total: -1.23 kcal Atomic # 8 Polarization: -4.11 SS G_CDS: -1.08 Total: -5.19 kcal Atomic # 9 Polarization: -0.06 SS G_CDS: 0.04 Total: -0.02 kcal Atomic # 14 Polarization: -0.51 SS G_CDS: -5.28 Total: -5.79 kcal Atomic # 16 Polarization: 0.03 SS G_CDS: -2.21 Total: -2.18 kcal Total LS contribution 5.93 Total: 5.93 kcal Total: -8.37 -10.81 -19.18 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_27_15734574_15704118.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -57.480 kcal (2) G-P(sol) polarization free energy of solvation -8.368 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -65.848 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.815 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.183 kcal (6) G-S(sol) free energy of system = (1) + (5) -76.663 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.83 seconds