Wall clock time and date at job start Tue Mar 9 2021 14:31:11 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52999 * 1 3 3 C 1.53005 * 109.47103 * 2 1 4 4 C 1.53002 * 109.47497 * 240.00350 * 2 1 3 5 5 O 1.45195 * 109.47224 * 120.00099 * 2 1 3 6 6 C 1.34638 * 117.00135 * 60.00489 * 5 2 1 7 7 O 1.21513 * 119.99867 * 359.97438 * 6 5 2 8 8 N 1.34777 * 120.00235 * 180.02562 * 6 5 2 9 9 C 1.46498 * 119.99828 * 180.27525 * 8 6 5 10 10 C 1.52996 * 109.47059 * 179.72339 * 9 8 6 11 11 F 1.39898 * 112.85056 * 48.80026 * 10 9 8 12 12 C 1.53780 * 113.61483 * 179.97438 * 10 9 8 13 13 C 1.53780 * 87.08191 * 139.97866 * 12 10 9 14 14 H 1.09004 * 113.61314 * 89.11934 * 13 12 10 15 15 N 1.46508 * 113.61481 * 219.93142 * 13 12 10 16 16 C 1.39142 * 119.99756 * 204.99895 * 15 13 12 17 17 N 1.32339 * 119.72176 * 359.73017 * 16 15 13 18 18 C 1.32010 * 121.64568 * 179.75374 * 17 16 15 19 19 C 1.37983 * 120.90122 * 0.52236 * 18 17 16 20 20 C 1.50695 * 120.33088 * 179.76545 * 19 18 17 21 21 O 1.42901 * 109.47585 * 244.98177 * 20 19 18 22 22 Si 1.86301 * 109.46711 * 4.97847 * 20 19 18 23 23 C 1.38914 * 119.34577 * 359.74570 * 19 18 17 24 24 C 1.38441 * 118.48407 * 359.97438 * 23 19 18 25 25 F 1.35100 * 120.46830 * 179.97438 * 24 23 19 26 26 C 1.53780 * 87.08248 * 334.56887 * 13 12 10 27 27 H 1.08996 * 109.47509 * 299.99293 * 1 2 3 28 28 H 1.09006 * 109.47298 * 59.99979 * 1 2 3 29 29 H 1.09003 * 109.46856 * 179.97438 * 1 2 3 30 30 H 1.08995 * 109.47042 * 179.97438 * 3 2 1 31 31 H 1.08992 * 109.47205 * 300.00164 * 3 2 1 32 32 H 1.09001 * 109.46587 * 60.00389 * 3 2 1 33 33 H 1.09003 * 109.46840 * 300.00288 * 4 2 1 34 34 H 1.09006 * 109.47115 * 59.99560 * 4 2 1 35 35 H 1.08995 * 109.47291 * 179.97438 * 4 2 1 36 36 H 0.97001 * 119.99727 * 359.97438 * 8 6 5 37 37 H 1.09004 * 109.46963 * 299.72135 * 9 8 6 38 38 H 1.08994 * 109.47567 * 59.72287 * 9 8 6 39 39 H 1.09002 * 113.61520 * 254.52256 * 12 10 9 40 40 H 1.09001 * 113.61586 * 25.43061 * 12 10 9 41 41 H 0.96992 * 119.99704 * 25.00218 * 15 13 12 42 42 H 1.08001 * 119.54896 * 180.26713 * 18 17 16 43 43 H 1.09002 * 109.47565 * 124.97293 * 20 19 18 44 44 H 0.96696 * 114.00075 * 179.97438 * 21 20 19 45 45 H 1.48499 * 110.00217 * 299.99614 * 22 20 19 46 46 H 1.48506 * 110.00308 * 61.32040 * 22 20 19 47 47 H 1.08004 * 120.75187 * 180.02562 * 23 19 18 48 48 H 1.09006 * 113.60830 * 270.88298 * 26 13 12 49 49 H 1.08992 * 113.61689 * 139.98745 * 26 13 12 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4426 0.0000 4 6 2.0401 -0.7212 -1.2493 5 8 2.0140 -0.6845 1.1855 6 6 1.6523 -1.9723 1.3382 7 8 0.9510 -2.5095 0.5039 8 7 2.0673 -2.6655 2.4170 9 6 1.6788 -4.0686 2.5801 10 6 2.2829 -4.6180 3.8739 11 9 2.0627 -3.7823 4.9740 12 6 1.9325 -6.0915 4.1402 13 6 3.3807 -6.2661 4.6271 14 1 3.5110 -6.0657 5.6906 15 7 3.9927 -7.5293 4.2071 16 6 5.0366 -8.0763 4.9469 17 7 5.4758 -7.4482 6.0257 18 6 6.4604 -7.9351 6.7580 19 6 7.0787 -9.1203 6.4160 20 6 8.2049 -9.6617 7.2583 21 8 9.4126 -9.6639 6.4944 22 14 8.4251 -8.5882 8.7649 23 6 6.6525 -9.8097 5.2879 24 6 5.6141 -9.2782 4.5424 25 9 5.1680 -9.9150 3.4375 26 6 3.7442 -5.0739 3.7264 27 1 -0.3634 0.5137 0.8900 28 1 -0.3634 0.5139 -0.8900 29 1 -0.3633 -1.0277 -0.0005 30 1 3.1300 1.4425 0.0005 31 1 1.6767 1.9564 -0.8899 32 1 1.6767 1.9563 0.8901 33 1 1.6767 -1.7488 -1.2493 34 1 1.6767 -0.2073 -2.1393 35 1 3.1300 -0.7207 -1.2495 36 1 2.6269 -2.2366 3.0832 37 1 0.5922 -4.1415 2.6268 38 1 2.0457 -4.6481 1.7330 39 1 1.1886 -6.2284 4.9251 40 1 1.7046 -6.6564 3.2363 41 1 3.6703 -7.9841 3.4135 42 1 6.7891 -7.3964 7.6344 43 1 7.9695 -10.6797 7.5688 44 1 10.1813 -10.0003 6.9749 45 1 8.7465 -7.1975 8.3551 46 1 7.1868 -8.6029 9.5845 47 1 7.1200 -10.7397 4.9995 48 1 4.0116 -5.3606 2.7093 49 1 4.4628 -4.3894 4.1770 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_27_15734574_17656566.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 14:31:11 Heat of formation + Delta-G solvation = -127.936621 kcal Electronic energy + Delta-G solvation = -33838.252727 eV Core-core repulsion = 28825.457726 eV Total energy + Delta-G solvation = -5012.795001 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 372.169 amu Computer time = 1.22 seconds Orbital eigenvalues (eV) -50.06350 -48.97007 -41.88738 -41.58288 -39.97766 -38.51570 -37.81101 -36.25191 -35.42950 -34.74806 -33.39145 -31.53546 -29.20659 -28.41004 -28.34662 -27.17354 -26.56797 -25.49910 -23.85167 -23.02933 -22.54625 -21.43742 -20.90586 -19.50587 -19.34730 -18.68582 -18.37200 -18.11304 -17.87354 -17.49478 -17.11661 -17.04820 -17.02319 -16.59383 -16.44108 -15.89181 -15.71196 -15.50943 -15.47421 -15.19995 -15.07360 -15.05790 -14.63568 -14.51568 -14.43564 -14.24283 -13.98648 -13.90469 -13.60935 -13.40715 -13.16814 -13.10705 -12.96871 -12.91899 -12.85435 -12.55914 -12.52985 -12.41150 -12.12432 -11.88083 -11.53725 -11.45296 -11.34256 -11.20264 -10.91231 -10.84160 -10.39867 -10.25607 -8.91883 -4.92913 -0.27332 -0.02847 1.01925 1.30969 1.64327 1.67964 1.81762 1.98073 2.34204 2.83934 2.87022 2.93908 3.02059 3.11238 3.21129 3.32198 3.48765 3.52731 3.61468 3.69240 3.73726 3.74804 3.89689 4.02581 4.16667 4.27511 4.28611 4.35988 4.42225 4.48156 4.52210 4.54302 4.57296 4.58580 4.69353 4.72288 4.75858 4.79393 4.81907 4.83179 4.87467 4.94998 5.04086 5.14448 5.22776 5.28011 5.29183 5.48457 5.79252 6.05423 6.20785 6.79498 6.93946 7.19748 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.180 4.180 2 C 0.126 3.874 3 C -0.138 4.138 4 C -0.180 4.180 5 O -0.370 6.370 6 C 0.647 3.353 7 O -0.589 6.589 8 N -0.704 5.704 9 C 0.135 3.865 10 C 0.089 3.911 11 F -0.194 7.194 12 C -0.145 4.145 13 C 0.137 3.863 14 H 0.109 0.891 15 N -0.698 5.698 16 C 0.379 3.621 17 N -0.529 5.529 18 C 0.126 3.874 19 C -0.169 4.169 20 C -0.064 4.064 21 O -0.565 6.565 22 Si 0.770 3.230 23 C -0.038 4.038 24 C -0.026 4.026 25 F -0.133 7.133 26 C -0.163 4.163 27 H 0.060 0.940 28 H 0.088 0.912 29 H 0.064 0.936 30 H 0.069 0.931 31 H 0.100 0.900 32 H 0.068 0.932 33 H 0.065 0.935 34 H 0.088 0.912 35 H 0.061 0.939 36 H 0.415 0.585 37 H 0.083 0.917 38 H 0.103 0.897 39 H 0.098 0.902 40 H 0.132 0.868 41 H 0.422 0.578 42 H 0.156 0.844 43 H 0.101 0.899 44 H 0.405 0.595 45 H -0.293 1.293 46 H -0.285 1.285 47 H 0.167 0.833 48 H 0.116 0.884 49 H 0.081 0.919 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.605 -2.685 2.453 5.121 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.237 4.237 2 C 0.090 3.910 3 C -0.195 4.195 4 C -0.237 4.237 5 O -0.285 6.285 6 C 0.400 3.600 7 O -0.480 6.480 8 N -0.364 5.364 9 C 0.012 3.988 10 C 0.070 3.930 11 F -0.174 7.174 12 C -0.183 4.183 13 C 0.031 3.969 14 H 0.127 0.873 15 N -0.331 5.331 16 C 0.140 3.860 17 N -0.246 5.246 18 C -0.030 4.030 19 C -0.174 4.174 20 C -0.175 4.175 21 O -0.375 6.375 22 Si 0.676 3.324 23 C -0.064 4.064 24 C -0.052 4.052 25 F -0.112 7.112 26 C -0.202 4.202 27 H 0.079 0.921 28 H 0.107 0.893 29 H 0.083 0.917 30 H 0.088 0.912 31 H 0.119 0.881 32 H 0.087 0.913 33 H 0.084 0.916 34 H 0.107 0.893 35 H 0.080 0.920 36 H 0.251 0.749 37 H 0.101 0.899 38 H 0.121 0.879 39 H 0.117 0.883 40 H 0.150 0.850 41 H 0.261 0.739 42 H 0.173 0.827 43 H 0.119 0.881 44 H 0.257 0.743 45 H -0.221 1.221 46 H -0.212 1.212 47 H 0.185 0.815 48 H 0.134 0.866 49 H 0.099 0.901 Dipole moment (debyes) X Y Z Total from point charges 2.081 -1.004 2.270 3.239 hybrid contribution -0.059 -0.804 -0.735 1.090 sum 2.022 -1.808 1.535 3.117 Atomic orbital electron populations 1.22479 0.93934 1.03768 1.03563 1.22398 0.94561 0.92595 0.81456 1.21900 1.02452 0.90895 1.04285 1.22474 1.01635 1.02307 0.97255 1.86319 1.71531 1.23181 1.47467 1.18219 0.78678 0.80864 0.82204 1.90913 1.41969 1.70973 1.44137 1.44538 1.55720 1.12559 1.23550 1.21834 1.01202 0.79451 0.96333 1.21812 0.98447 0.89915 0.82840 1.92884 1.95680 1.73387 1.55462 1.23986 0.96967 0.92383 1.04997 1.22385 0.92448 0.82262 0.99774 0.87342 1.44463 1.34290 1.24831 1.29498 1.18574 0.89431 0.88138 0.89808 1.67238 1.16513 1.34190 1.06698 1.22355 0.91017 0.92449 0.97185 1.20263 1.01030 0.97042 0.99063 1.24589 0.84374 1.07590 1.00933 1.86441 1.18636 1.88846 1.43620 0.94149 0.84644 0.76938 0.76700 1.21526 0.92211 1.00545 0.92103 1.18080 1.01950 0.95047 0.90120 1.91489 1.88585 1.81094 1.50002 1.24220 0.94820 0.98155 1.03025 0.92058 0.89279 0.91680 0.91217 0.88125 0.91290 0.91620 0.89326 0.91954 0.74887 0.89872 0.87905 0.88329 0.84992 0.73855 0.82742 0.88104 0.74309 1.22067 1.21185 0.81517 0.86550 0.90065 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.68 8.37 71.98 0.60 -0.08 16 2 C 0.13 0.46 1.13 -10.79 -0.01 0.45 16 3 C -0.14 0.17 8.85 71.98 0.64 0.81 16 4 C -0.18 -0.61 8.37 71.98 0.60 0.00 16 5 O -0.37 -2.50 9.94 -55.48 -0.55 -3.05 16 6 C 0.65 4.82 8.06 129.79 1.05 5.87 16 7 O -0.59 -6.90 11.88 19.80 0.24 -6.67 16 8 N -0.70 -1.43 5.47 -590.86 -3.23 -4.66 16 9 C 0.13 -0.22 5.37 86.38 0.46 0.25 16 10 C 0.09 -0.25 1.67 -10.27 -0.02 -0.27 16 11 F -0.19 -0.46 16.80 44.97 0.76 0.29 16 12 C -0.14 0.81 7.29 31.12 0.23 1.03 16 13 C 0.14 -0.19 4.24 45.52 0.19 0.00 16 14 H 0.11 0.30 7.41 -2.38 -0.02 0.28 16 15 N -0.70 0.13 5.51 -321.77 -1.77 -1.65 16 16 C 0.38 1.92 7.49 133.08 1.00 2.92 16 17 N -0.53 -3.94 9.13 -193.03 -1.76 -5.70 16 18 C 0.13 0.74 9.84 84.61 0.83 1.57 16 19 C -0.17 -0.53 5.39 -19.76 -0.11 -0.64 16 20 C -0.06 0.20 2.81 71.23 0.20 0.40 16 21 O -0.57 1.52 12.82 -148.98 -1.91 -0.38 16 22 Si 0.77 -3.21 29.87 68.60 2.05 -1.16 16 23 C -0.04 -0.11 9.82 22.48 0.22 0.11 16 24 C -0.03 -0.12 7.35 22.58 0.17 0.05 16 25 F -0.13 -0.57 16.65 44.97 0.75 0.17 16 26 C -0.16 0.46 7.33 31.12 0.23 0.69 16 27 H 0.06 0.21 8.14 -2.39 -0.02 0.19 16 28 H 0.09 0.00 8.14 -2.38 -0.02 -0.02 16 29 H 0.06 0.57 5.88 -2.39 -0.01 0.55 16 30 H 0.07 -0.10 8.14 -2.39 -0.02 -0.11 16 31 H 0.10 -0.48 8.14 -2.39 -0.02 -0.50 16 32 H 0.07 -0.08 8.14 -2.39 -0.02 -0.10 16 33 H 0.06 0.54 5.88 -2.39 -0.01 0.53 16 34 H 0.09 -0.02 8.14 -2.38 -0.02 -0.04 16 35 H 0.06 0.17 8.14 -2.39 -0.02 0.15 16 36 H 0.41 0.00 8.30 -92.71 -0.77 -0.77 16 37 H 0.08 -0.05 8.14 -2.38 -0.02 -0.07 16 38 H 0.10 -0.35 7.94 -2.39 -0.02 -0.37 16 39 H 0.10 -0.51 8.14 -2.39 -0.02 -0.53 16 40 H 0.13 -1.31 8.08 -2.39 -0.02 -1.33 16 41 H 0.42 -1.59 8.20 -92.71 -0.76 -2.35 16 42 H 0.16 0.67 4.87 -2.91 -0.01 0.66 16 43 H 0.10 -0.79 7.96 -2.39 -0.02 -0.80 16 44 H 0.41 -5.34 8.74 -74.06 -0.65 -5.98 16 45 H -0.29 -0.98 7.05 99.48 0.70 -0.28 16 46 H -0.28 -0.37 7.11 99.48 0.71 0.33 16 47 H 0.17 -0.14 8.06 -2.91 -0.02 -0.16 16 48 H 0.12 -0.56 7.96 -2.38 -0.02 -0.58 16 49 H 0.08 -0.04 8.14 -2.39 -0.02 -0.06 16 Total: 0.00 -20.74 406.29 -0.28 -21.02 By element: Atomic # 1 Polarization: -10.26 SS G_CDS: -1.12 Total: -11.38 kcal Atomic # 6 Polarization: 6.88 SS G_CDS: 6.28 Total: 13.16 kcal Atomic # 7 Polarization: -5.24 SS G_CDS: -6.77 Total: -12.01 kcal Atomic # 8 Polarization: -7.87 SS G_CDS: -2.23 Total: -10.10 kcal Atomic # 9 Polarization: -1.03 SS G_CDS: 1.50 Total: 0.47 kcal Atomic # 14 Polarization: -3.21 SS G_CDS: 2.05 Total: -1.16 kcal Total: -20.74 -0.28 -21.02 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_27_15734574_17656566.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -106.915 kcal (2) G-P(sol) polarization free energy of solvation -20.738 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -127.654 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.283 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.021 kcal (6) G-S(sol) free energy of system = (1) + (5) -127.937 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.23 seconds