Wall clock time and date at job start Tue Mar 9 2021 14:34:09 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42894 * 1 3 3 Si 1.86295 * 109.47531 * 2 1 4 4 H 1.48499 * 109.46901 * 299.99853 * 3 2 1 5 5 H 1.48505 * 109.47225 * 59.99655 * 3 2 1 6 6 H 1.48496 * 109.47700 * 179.97438 * 3 2 1 7 7 C 1.50698 * 109.47113 * 239.99455 * 2 1 3 8 8 C 1.38859 * 120.33261 * 300.02683 * 7 2 1 9 9 C 1.38478 * 118.48631 * 179.97438 * 8 7 2 10 10 F 1.35107 * 120.46998 * 180.02562 * 9 8 7 11 11 C 1.39303 * 119.06227 * 359.97438 * 9 8 7 12 12 N 1.39143 * 119.72119 * 180.02562 * 11 9 8 13 13 C 1.46492 * 120.00234 * 179.97438 * 12 11 9 14 14 C 1.52571 * 108.90962 * 277.82942 * 13 12 11 15 15 C 1.54358 * 109.19855 * 161.48043 * 14 13 12 16 16 Si 1.85203 * 107.06095 * 56.71787 * 15 14 13 17 17 C 1.87772 * 111.38248 * 81.20180 * 16 15 14 18 18 C 1.56400 * 98.95907 * 98.20147 * 17 16 15 19 19 C 1.53775 * 109.79299 * 39.36990 * 18 17 16 20 20 C 1.55688 * 111.39197 * 312.19217 * 19 18 17 21 21 C 1.85213 * 110.01806 * 317.19974 * 16 15 14 22 22 C 1.52575 * 108.90795 * 154.99976 * 13 12 11 23 23 N 1.32365 * 120.56290 * 359.97438 * 11 9 8 24 24 C 1.31977 * 121.64587 * 0.02562 * 23 11 9 25 25 H 0.96710 * 113.99920 * 59.99836 * 1 2 3 26 26 H 1.09006 * 109.46651 * 119.99923 * 2 1 3 27 27 H 1.08000 * 120.75170 * 359.95269 * 8 7 2 28 28 H 0.97007 * 119.99793 * 359.97438 * 12 11 9 29 29 H 1.09005 * 108.88509 * 36.36954 * 13 12 11 30 30 H 1.08994 * 109.51872 * 281.40147 * 14 13 12 31 31 H 1.09007 * 109.51086 * 41.56673 * 14 13 12 32 32 H 1.08997 * 109.93509 * 297.33257 * 15 14 13 33 33 H 1.08997 * 109.93533 * 176.10616 * 15 14 13 34 34 H 1.08995 * 111.49335 * 215.64009 * 17 16 15 35 35 H 1.08998 * 111.49390 * 340.75857 * 17 16 15 36 36 H 1.09002 * 109.41476 * 279.26801 * 18 17 16 37 37 H 1.09000 * 109.41787 * 159.46602 * 18 17 16 38 38 H 1.08996 * 109.10028 * 191.68623 * 19 18 17 39 39 H 1.08995 * 109.10286 * 72.70252 * 19 18 17 40 40 H 1.08998 * 111.14784 * 270.08296 * 20 19 18 41 41 H 1.09003 * 111.17938 * 145.89062 * 20 19 18 42 42 H 1.09000 * 109.93323 * 283.41024 * 21 16 15 43 43 H 1.09003 * 110.00313 * 162.22371 * 21 16 15 44 44 H 1.09000 * 109.51168 * 318.43065 * 22 13 12 45 45 H 1.08992 * 109.51605 * 78.54175 * 22 13 12 46 46 H 1.08004 * 119.55148 * 180.27203 * 24 23 11 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 1 1.5551 2.4564 -1.2125 5 1 1.5550 2.4565 1.2125 6 1 3.5350 1.7564 0.0006 7 6 1.9313 -0.7105 -1.2304 8 6 1.5996 -2.0397 -1.4571 9 6 2.0815 -2.6549 -2.6003 10 9 1.7832 -3.9466 -2.8608 11 6 2.8775 -1.9229 -3.4784 12 7 3.3686 -2.5273 -4.6315 13 6 4.2058 -1.7630 -5.5594 14 6 3.3049 -0.9345 -6.4704 15 6 4.1356 0.1963 -7.1136 16 14 5.5484 -0.6057 -8.0028 17 6 5.0208 -1.2503 -9.6857 18 6 5.5239 -0.0625 -10.5701 19 6 6.8791 0.4401 -10.0451 20 6 6.8485 0.6486 -8.5025 21 6 6.2705 -1.9548 -6.9593 22 6 5.0882 -2.7314 -6.3414 23 7 3.1697 -0.6568 -3.2258 24 6 2.7240 -0.0458 -2.1442 25 1 -0.3933 0.4418 -0.7651 26 1 1.7922 -0.5139 0.8901 27 1 0.9801 -2.5814 -0.7576 28 1 3.1567 -3.4548 -4.8208 29 1 4.8425 -1.0888 -4.9867 30 1 2.8915 -1.5724 -7.2516 31 1 2.4935 -0.5024 -5.8846 32 1 4.5145 0.8649 -6.3407 33 1 3.5204 0.7538 -7.8199 34 1 5.5328 -2.1794 -9.9359 35 1 3.9387 -1.3646 -9.7482 36 1 4.7975 0.7494 -10.5337 37 1 5.6372 -0.4003 -11.6002 38 1 7.1198 1.3870 -10.5283 39 1 7.6500 -0.2900 -10.2912 40 1 6.5357 1.6614 -8.2487 41 1 7.8140 0.4140 -8.0542 42 1 6.8860 -1.5245 -6.1693 43 1 6.8716 -2.6225 -7.5765 44 1 5.4692 -3.5005 -5.6694 45 1 4.5036 -3.1977 -7.1343 46 1 2.9796 0.9896 -1.9738 RHF calculation, no. of doubly occupied orbitals= 58 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV m_27_15739292_17656566.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 14:34:09 Heat of formation + Delta-G solvation = -89.433653 kcal Electronic energy + Delta-G solvation = -25665.677579 eV Core-core repulsion = 22013.202597 eV Total energy + Delta-G solvation = -3652.474981 eV No. of doubly occupied orbitals = 58 Molecular weight (most abundant/longest-lived isotopes) = 324.154 amu Computer time = 0.65 seconds Orbital eigenvalues (eV) -49.82215 -41.42384 -39.04875 -37.71301 -36.22183 -34.77013 -33.13720 -32.15914 -31.21656 -29.77682 -27.41251 -26.02736 -24.97232 -24.34796 -23.64174 -22.79819 -21.66861 -20.91119 -19.29844 -18.49838 -18.28896 -17.65688 -16.92397 -16.50688 -16.15881 -16.12874 -16.00353 -15.89501 -15.69751 -15.59392 -15.20213 -14.72200 -14.61824 -14.27967 -14.05608 -13.77667 -13.54270 -13.44603 -13.29893 -13.03524 -12.90024 -12.62288 -12.57061 -12.28996 -12.20369 -12.19871 -12.03901 -11.99124 -11.83057 -11.42265 -11.26647 -10.67422 -10.57825 -10.45632 -10.40765 -10.32291 -10.25918 -8.71837 -0.03602 0.16761 1.09100 1.39115 1.45152 1.65978 1.76569 1.82107 1.87061 2.01255 2.57356 2.59722 3.08445 3.28745 3.41549 3.60815 3.70694 3.85602 3.98988 4.04619 4.06657 4.09136 4.15343 4.27275 4.35265 4.40938 4.46976 4.48780 4.58341 4.62109 4.63800 4.71657 4.77895 4.81870 5.00370 5.01998 5.04442 5.06730 5.14097 5.14843 5.25070 5.27751 5.30999 5.36742 5.44611 5.46370 5.51907 6.00887 6.22368 6.49701 7.00257 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.539 6.539 2 C -0.067 4.067 3 Si 0.942 3.058 4 H -0.248 1.248 5 H -0.250 1.250 6 H -0.247 1.247 7 C -0.212 4.212 8 C -0.035 4.035 9 C -0.022 4.022 10 F -0.134 7.134 11 C 0.391 3.609 12 N -0.714 5.714 13 C 0.145 3.855 14 C -0.116 4.116 15 C -0.404 4.404 16 Si 0.990 3.010 17 C -0.405 4.405 18 C -0.122 4.122 19 C -0.119 4.119 20 C -0.408 4.408 21 C -0.405 4.405 22 C -0.118 4.118 23 N -0.509 5.509 24 C 0.140 3.860 25 H 0.377 0.623 26 H 0.119 0.881 27 H 0.151 0.849 28 H 0.411 0.589 29 H 0.093 0.907 30 H 0.063 0.937 31 H 0.069 0.931 32 H 0.082 0.918 33 H 0.079 0.921 34 H 0.077 0.923 35 H 0.077 0.923 36 H 0.063 0.937 37 H 0.064 0.936 38 H 0.062 0.938 39 H 0.061 0.939 40 H 0.077 0.923 41 H 0.078 0.922 42 H 0.080 0.920 43 H 0.083 0.917 44 H 0.071 0.929 45 H 0.071 0.929 46 H 0.156 0.844 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.930 0.862 -0.880 1.544 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.344 6.344 2 C -0.178 4.178 3 Si 0.764 3.236 4 H -0.171 1.171 5 H -0.173 1.173 6 H -0.170 1.170 7 C -0.218 4.218 8 C -0.061 4.061 9 C -0.049 4.049 10 F -0.113 7.113 11 C 0.153 3.847 12 N -0.346 5.346 13 C 0.041 3.959 14 C -0.154 4.154 15 C -0.491 4.491 16 Si 1.185 2.815 17 C -0.491 4.491 18 C -0.159 4.159 19 C -0.156 4.156 20 C -0.494 4.494 21 C -0.491 4.491 22 C -0.156 4.156 23 N -0.226 5.226 24 C -0.018 4.018 25 H 0.224 0.776 26 H 0.137 0.863 27 H 0.168 0.832 28 H 0.248 0.752 29 H 0.111 0.889 30 H 0.081 0.919 31 H 0.088 0.912 32 H 0.100 0.900 33 H 0.098 0.902 34 H 0.096 0.904 35 H 0.096 0.904 36 H 0.081 0.919 37 H 0.083 0.917 38 H 0.080 0.920 39 H 0.080 0.920 40 H 0.096 0.904 41 H 0.097 0.903 42 H 0.099 0.901 43 H 0.102 0.898 44 H 0.090 0.910 45 H 0.090 0.910 46 H 0.173 0.827 Dipole moment (debyes) X Y Z Total from point charges 1.951 1.888 -1.015 2.898 hybrid contribution -0.852 -1.256 -0.174 1.528 sum 1.098 0.633 -1.188 1.738 Atomic orbital electron populations 1.86522 1.17151 1.81553 1.49163 1.24775 0.85084 1.10358 0.97599 0.85797 0.80753 0.75196 0.81833 1.17133 1.17329 1.17047 1.20891 1.05041 0.95352 1.00487 1.21255 0.96086 0.94156 0.94620 1.18015 1.06934 0.80956 0.98957 1.91492 1.92176 1.33635 1.93981 1.18445 0.90058 0.89094 0.87132 1.44796 1.54849 1.14584 1.20404 1.21096 0.91323 0.93242 0.90242 1.21694 0.98602 0.96620 0.98514 1.26133 1.12277 1.03312 1.07354 0.79784 0.67324 0.67421 0.67016 1.26659 1.04313 1.01058 1.17067 1.22022 0.96626 0.97323 0.99936 1.21837 0.97423 1.01225 0.95128 1.26496 1.12065 1.11029 0.99807 1.26142 1.01996 1.11957 1.09049 1.21587 0.96275 0.98041 0.99733 1.67325 1.26220 1.07454 1.21621 1.22366 0.92105 0.99203 0.88112 0.77596 0.86282 0.83161 0.75205 0.88921 0.91855 0.91201 0.89967 0.90227 0.90385 0.90399 0.91853 0.91711 0.91957 0.92037 0.90404 0.90325 0.90121 0.89815 0.90996 0.91031 0.82707 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.27 12.78 -35.23 -0.45 -0.18 16 2 C -0.07 0.09 2.83 36.00 0.10 0.19 16 3 Si 0.94 -1.43 25.10 -169.99 -4.27 -5.70 16 4 H -0.25 0.34 7.11 56.52 0.40 0.74 16 5 H -0.25 -0.01 7.11 56.52 0.40 0.39 16 6 H -0.25 0.26 7.11 56.52 0.40 0.66 16 7 C -0.21 0.01 5.40 -104.47 -0.56 -0.56 16 8 C -0.03 -0.03 9.75 -39.26 -0.38 -0.41 16 9 C -0.02 -0.04 7.35 -39.10 -0.29 -0.33 16 10 F -0.13 -0.32 16.65 2.25 0.04 -0.28 16 11 C 0.39 0.74 7.25 -154.85 -1.12 -0.38 16 12 N -0.71 -0.26 5.18 -54.28 -0.28 -0.54 16 13 C 0.15 -0.06 1.97 -68.37 -0.13 -0.20 16 14 C -0.12 0.05 5.24 -26.24 -0.14 -0.09 16 15 C -0.40 0.50 4.96 37.87 0.19 0.69 16 16 Si 0.99 -2.34 10.57 -169.99 -1.80 -4.14 16 17 C -0.40 0.50 5.95 38.99 0.23 0.74 16 18 C -0.12 0.06 5.97 -24.50 -0.15 -0.08 16 19 C -0.12 0.05 6.10 -24.90 -0.15 -0.10 16 20 C -0.41 0.44 5.84 38.59 0.23 0.66 16 21 C -0.40 0.80 4.95 37.87 0.19 0.99 16 22 C -0.12 0.19 5.11 -26.24 -0.13 0.06 16 23 N -0.51 -1.06 9.20 -12.36 -0.11 -1.17 16 24 C 0.14 0.09 9.84 -17.56 -0.17 -0.08 16 25 H 0.38 -1.34 8.70 45.56 0.40 -0.95 16 26 H 0.12 -0.25 7.96 -51.93 -0.41 -0.67 16 27 H 0.15 -0.05 8.06 -52.49 -0.42 -0.47 16 28 H 0.41 -0.32 8.05 -40.82 -0.33 -0.65 16 29 H 0.09 0.06 7.25 -51.93 -0.38 -0.32 16 30 H 0.06 -0.07 7.76 -51.93 -0.40 -0.47 16 31 H 0.07 0.10 7.91 -51.92 -0.41 -0.31 16 32 H 0.08 -0.07 7.97 -51.93 -0.41 -0.49 16 33 H 0.08 -0.10 7.97 -51.93 -0.41 -0.51 16 34 H 0.08 -0.10 8.04 -51.93 -0.42 -0.52 16 35 H 0.08 -0.10 8.04 -51.93 -0.42 -0.52 16 36 H 0.06 -0.05 8.14 -51.93 -0.42 -0.47 16 37 H 0.06 -0.02 8.14 -51.93 -0.42 -0.44 16 38 H 0.06 -0.02 8.14 -51.93 -0.42 -0.44 16 39 H 0.06 -0.03 8.14 -51.93 -0.42 -0.46 16 40 H 0.08 -0.08 8.03 -51.93 -0.42 -0.50 16 41 H 0.08 -0.10 8.03 -51.93 -0.42 -0.51 16 42 H 0.08 -0.15 7.97 -51.93 -0.41 -0.56 16 43 H 0.08 -0.18 7.97 -51.93 -0.41 -0.60 16 44 H 0.07 -0.09 8.13 -51.93 -0.42 -0.52 16 45 H 0.07 -0.17 7.76 -51.93 -0.40 -0.58 16 46 H 0.16 -0.17 4.88 -52.48 -0.26 -0.42 16 LS Contribution 362.34 15.07 5.46 5.46 Total: 0.00 -4.45 362.34 -10.56 -15.01 By element: Atomic # 1 Polarization: -2.72 SS G_CDS: -6.85 Total: -9.57 kcal Atomic # 6 Polarization: 3.40 SS G_CDS: -2.30 Total: 1.10 kcal Atomic # 7 Polarization: -1.32 SS G_CDS: -0.40 Total: -1.71 kcal Atomic # 8 Polarization: 0.27 SS G_CDS: -0.45 Total: -0.18 kcal Atomic # 9 Polarization: -0.32 SS G_CDS: 0.04 Total: -0.28 kcal Atomic # 14 Polarization: -3.77 SS G_CDS: -6.06 Total: -9.84 kcal Total LS contribution 5.46 Total: 5.46 kcal Total: -4.45 -10.56 -15.01 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_27_15739292_17656566.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -74.422 kcal (2) G-P(sol) polarization free energy of solvation -4.452 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -78.874 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.560 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -15.012 kcal (6) G-S(sol) free energy of system = (1) + (5) -89.434 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.65 seconds