Wall clock time and date at job start Tue Mar 9 2021 14:34:31 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42902 * 1 3 3 Si 1.86292 * 109.47372 * 2 1 4 4 H 1.48501 * 109.47205 * 179.97438 * 3 2 1 5 5 H 1.48495 * 109.47325 * 299.99819 * 3 2 1 6 6 H 1.48509 * 109.47422 * 59.99863 * 3 2 1 7 7 C 1.50707 * 109.46549 * 120.00174 * 2 1 3 8 8 C 1.38020 * 120.33048 * 244.99769 * 7 2 1 9 9 N 1.31978 * 120.85609 * 180.02562 * 8 7 2 10 10 C 1.32394 * 121.61949 * 359.97438 * 9 8 7 11 11 N 1.39008 * 119.70480 * 180.02562 * 10 9 8 12 12 C 1.46497 * 119.99813 * 179.97438 * 11 10 9 13 13 C 1.52553 * 108.99296 * 204.99872 * 12 11 10 14 14 C 1.53961 * 109.47306 * 162.08677 * 13 12 11 15 15 Si 1.86525 * 107.22835 * 58.20859 * 14 13 12 16 16 C 1.86519 * 110.13125 * 75.93026 * 15 14 13 17 17 C 1.53960 * 107.22536 * 75.92859 * 16 15 14 18 18 C 1.52554 * 109.47390 * 58.21056 * 17 16 15 19 19 C 1.52554 * 111.83887 * 282.74859 * 18 17 16 20 20 C 1.53835 * 109.54429 * 77.33395 * 19 18 17 21 21 C 1.86518 * 108.14467 * 315.53238 * 15 14 13 22 22 C 1.52550 * 108.99404 * 82.61020 * 12 11 10 23 23 C 1.39143 * 120.59186 * 0.27374 * 10 9 8 24 24 C 1.38294 * 119.09010 * 359.48039 * 23 10 9 25 25 H 0.96702 * 113.99603 * 59.99462 * 1 2 3 26 26 H 1.08993 * 109.47036 * 239.99529 * 2 1 3 27 27 H 1.07996 * 119.57586 * 0.02562 * 8 7 2 28 28 H 0.97001 * 120.00032 * 0.02562 * 11 10 9 29 29 H 1.09002 * 108.91433 * 323.80123 * 12 11 10 30 30 H 1.09004 * 109.47423 * 42.08804 * 13 12 11 31 31 H 1.09004 * 109.47330 * 282.08620 * 13 12 11 32 32 H 1.09009 * 109.90250 * 298.78124 * 14 13 12 33 33 H 1.08995 * 109.90741 * 177.64109 * 14 13 12 34 34 H 1.08994 * 109.90496 * 316.50211 * 16 15 14 35 35 H 1.08999 * 109.90221 * 195.35583 * 16 15 14 36 36 H 1.08999 * 109.47427 * 298.21044 * 17 16 15 37 37 H 1.09001 * 109.46931 * 178.20824 * 17 16 15 38 38 H 1.09002 * 108.99526 * 43.33193 * 18 17 16 39 39 H 1.09001 * 108.99706 * 162.16560 * 18 17 16 40 40 H 1.08994 * 109.47726 * 197.24291 * 19 18 17 41 41 H 1.09003 * 109.46650 * 317.23929 * 19 18 17 42 42 H 1.08997 * 109.91671 * 182.32064 * 20 19 18 43 43 H 1.09005 * 109.93752 * 61.15488 * 20 19 18 44 44 H 1.09000 * 109.89815 * 163.89172 * 21 15 14 45 45 H 1.08997 * 109.90440 * 285.02429 * 21 15 14 46 46 H 1.08996 * 109.46695 * 317.89836 * 22 12 11 47 47 H 1.09000 * 109.46868 * 77.90042 * 22 12 11 48 48 H 1.07997 * 120.45219 * 179.70609 * 23 10 9 49 49 H 1.08006 * 120.74730 * 180.22071 * 24 23 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 1 3.5351 1.7563 0.0006 5 1 1.5552 2.4564 -1.2125 6 1 1.5551 2.4565 1.2125 7 6 1.9312 -0.7105 1.2305 8 6 2.6382 -0.0202 2.1942 9 7 3.0833 -0.6321 3.2755 10 6 2.8713 -1.9230 3.4794 11 7 3.3577 -2.5271 4.6330 12 6 3.1264 -3.9549 4.8654 13 6 3.1746 -4.2280 6.3655 14 6 2.5061 -5.5827 6.6623 15 14 3.4249 -6.8783 5.6844 16 6 5.0584 -7.2596 6.5000 17 6 4.7606 -8.1400 7.7275 18 6 4.0335 -9.4049 7.2817 19 6 2.5613 -9.1380 6.9837 20 6 2.4297 -8.4540 5.6121 21 6 3.7056 -6.2164 3.9633 22 6 4.1782 -4.7582 4.1067 23 6 2.1705 -2.6815 2.5469 24 6 1.6873 -2.0663 1.4064 25 1 -0.3933 0.4418 -0.7650 26 1 1.7923 -0.5139 -0.8899 27 1 2.8298 1.0343 2.0617 28 1 3.8496 -2.0031 5.2844 29 1 2.1383 -4.2188 4.4883 30 1 2.6442 -3.4372 6.8961 31 1 4.2127 -4.2548 6.6968 32 1 1.4610 -5.5564 6.3533 33 1 2.5736 -5.8045 7.7273 34 1 5.5407 -6.3345 6.8152 35 1 5.7034 -7.7976 5.8053 36 1 4.1332 -7.5878 8.4271 37 1 5.6966 -8.4119 8.2153 38 1 4.5130 -9.7916 6.3825 39 1 4.1056 -10.1526 8.0715 40 1 2.0163 -10.0818 6.9706 41 1 2.1462 -8.4896 7.7553 42 1 1.3835 -8.2234 5.4111 43 1 2.8233 -9.1061 4.8323 44 1 4.4708 -6.8066 3.4591 45 1 2.7754 -6.2509 3.3962 46 1 4.3229 -4.3243 3.1174 47 1 5.1197 -4.7337 4.6555 48 1 2.0030 -3.7353 2.7132 49 1 1.1368 -2.6287 0.6667 RHF calculation, no. of doubly occupied orbitals= 58 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV m_27_15739364_13915762.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 14:34:31 Heat of formation + Delta-G solvation = -49.800277 kcal Electronic energy + Delta-G solvation = -25113.162651 eV Core-core repulsion = 21776.322658 eV Total energy + Delta-G solvation = -3336.839992 eV No. of doubly occupied orbitals = 58 Molecular weight (most abundant/longest-lived isotopes) = 320.179 amu Computer time = 0.69 seconds Orbital eigenvalues (eV) -41.34506 -39.01524 -37.62464 -37.43133 -34.68326 -33.22525 -32.20751 -32.00915 -31.22916 -27.71397 -26.91178 -25.36528 -24.78938 -23.54831 -23.37006 -22.37211 -21.33712 -21.13679 -18.60900 -18.47168 -18.00645 -16.71881 -16.44984 -16.42905 -16.08532 -15.64707 -15.48005 -15.36519 -15.17843 -15.01939 -14.79222 -14.40032 -14.01073 -13.89869 -13.83061 -13.76172 -13.48053 -13.37336 -13.14389 -12.87446 -12.72622 -12.43075 -12.32807 -12.25786 -12.08036 -12.04876 -12.03097 -11.83449 -11.68643 -11.54619 -11.08676 -10.60113 -10.46179 -10.36761 -10.27954 -10.22124 -10.13692 -8.59331 0.35557 0.54347 1.18753 1.45474 1.53163 1.68675 1.71478 1.75784 1.93800 2.15597 2.52118 2.92393 3.52510 3.60674 3.71117 3.90779 3.91635 3.94501 4.01130 4.03559 4.11398 4.19458 4.20351 4.22425 4.36288 4.37908 4.39723 4.50950 4.51321 4.59072 4.68627 4.68736 4.73892 4.83589 4.85212 4.91573 5.01593 5.06558 5.12901 5.13218 5.14790 5.18498 5.25486 5.28858 5.29594 5.36877 5.38234 5.43568 5.52322 5.62895 6.11134 6.61412 6.65491 7.27144 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.547 6.547 2 C -0.065 4.065 3 Si 0.938 3.062 4 H -0.248 1.248 5 H -0.255 1.255 6 H -0.246 1.246 7 C -0.193 4.193 8 C 0.151 3.849 9 N -0.540 5.540 10 C 0.409 3.591 11 N -0.720 5.720 12 C 0.146 3.854 13 C -0.116 4.116 14 C -0.403 4.403 15 Si 0.998 3.002 16 C -0.406 4.406 17 C -0.109 4.109 18 C -0.132 4.132 19 C -0.109 4.109 20 C -0.408 4.408 21 C -0.406 4.406 22 C -0.125 4.125 23 C -0.240 4.240 24 C -0.003 4.003 25 H 0.379 0.621 26 H 0.073 0.927 27 H 0.148 0.852 28 H 0.404 0.596 29 H 0.083 0.917 30 H 0.073 0.927 31 H 0.071 0.929 32 H 0.079 0.921 33 H 0.082 0.918 34 H 0.073 0.927 35 H 0.075 0.925 36 H 0.062 0.938 37 H 0.061 0.939 38 H 0.064 0.936 39 H 0.061 0.939 40 H 0.061 0.939 41 H 0.063 0.937 42 H 0.074 0.926 43 H 0.075 0.925 44 H 0.080 0.920 45 H 0.077 0.923 46 H 0.069 0.931 47 H 0.069 0.931 48 H 0.135 0.865 49 H 0.135 0.865 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.084 -2.483 -0.942 2.657 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.352 6.352 2 C -0.177 4.177 3 Si 0.760 3.240 4 H -0.171 1.171 5 H -0.179 1.179 6 H -0.169 1.169 7 C -0.198 4.198 8 C -0.007 4.007 9 N -0.257 5.257 10 C 0.173 3.827 11 N -0.352 5.352 12 C 0.040 3.960 13 C -0.154 4.154 14 C -0.489 4.489 15 Si 1.192 2.808 16 C -0.492 4.492 17 C -0.146 4.146 18 C -0.170 4.170 19 C -0.147 4.147 20 C -0.494 4.494 21 C -0.493 4.493 22 C -0.164 4.164 23 C -0.264 4.264 24 C -0.029 4.029 25 H 0.226 0.774 26 H 0.091 0.909 27 H 0.165 0.835 28 H 0.240 0.760 29 H 0.101 0.899 30 H 0.091 0.909 31 H 0.090 0.910 32 H 0.098 0.902 33 H 0.101 0.899 34 H 0.092 0.908 35 H 0.094 0.906 36 H 0.081 0.919 37 H 0.080 0.920 38 H 0.083 0.917 39 H 0.080 0.920 40 H 0.080 0.920 41 H 0.082 0.918 42 H 0.093 0.907 43 H 0.094 0.906 44 H 0.099 0.901 45 H 0.096 0.904 46 H 0.088 0.912 47 H 0.087 0.913 48 H 0.153 0.847 49 H 0.153 0.847 Dipole moment (debyes) X Y Z Total from point charges 0.909 -1.684 0.281 1.934 hybrid contribution -0.486 -0.414 -0.910 1.112 sum 0.423 -2.098 -0.629 2.230 Atomic orbital electron populations 1.86520 1.17562 1.81639 1.49527 1.24457 0.85364 1.10107 0.97728 0.85877 0.80838 0.75795 0.81466 1.17145 1.17901 1.16949 1.19904 1.06017 0.95318 0.98549 1.22164 0.92122 0.98808 0.87627 1.67164 1.26039 1.09201 1.23299 1.18398 0.89100 0.88342 0.86865 1.44682 1.60586 1.09083 1.20818 1.21106 0.99666 0.79284 0.95915 1.21487 1.01855 0.98266 0.93745 1.26194 1.06891 1.06757 1.09073 0.79466 0.67761 0.66689 0.66876 1.26254 1.15763 1.03093 1.04082 1.21238 1.00356 0.95791 0.97263 1.21507 0.95675 0.98061 1.01750 1.21213 0.96124 1.00817 0.96535 1.26229 1.08699 1.14996 0.99465 1.26220 1.04732 1.00362 1.17951 1.21762 0.98669 0.94654 1.01267 1.21501 1.06680 1.01513 0.96751 1.21158 0.92821 0.93354 0.95535 0.77419 0.90863 0.83501 0.75974 0.89892 0.90861 0.91006 0.90229 0.89925 0.90791 0.90613 0.91894 0.92023 0.91677 0.91997 0.92024 0.91850 0.90712 0.90575 0.90123 0.90395 0.91205 0.91258 0.84695 0.84664 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -0.31 12.82 -35.23 -0.45 -0.76 16 2 C -0.07 -0.01 2.81 36.01 0.10 0.09 16 3 Si 0.94 -0.12 25.16 -169.99 -4.28 -4.40 16 4 H -0.25 -0.13 7.11 56.52 0.40 0.27 16 5 H -0.25 0.05 7.11 56.52 0.40 0.45 16 6 H -0.25 -0.33 7.05 56.52 0.40 0.07 16 7 C -0.19 -0.47 5.39 -104.46 -0.56 -1.03 16 8 C 0.15 0.52 9.84 -17.57 -0.17 0.34 16 9 N -0.54 -2.43 10.39 -12.44 -0.13 -2.56 16 10 C 0.41 1.24 7.47 -155.02 -1.16 0.08 16 11 N -0.72 -0.59 5.21 -54.38 -0.28 -0.87 16 12 C 0.15 -0.15 1.75 -68.39 -0.12 -0.27 16 13 C -0.12 0.22 5.07 -26.46 -0.13 0.08 16 14 C -0.40 0.98 4.97 37.66 0.19 1.17 16 15 Si 1.00 -3.04 9.19 -169.99 -1.56 -4.60 16 16 C -0.41 0.76 4.97 37.66 0.19 0.95 16 17 C -0.11 0.14 5.64 -26.46 -0.15 -0.01 16 18 C -0.13 0.15 5.40 -27.19 -0.15 0.00 16 19 C -0.11 0.13 5.62 -26.52 -0.15 -0.01 16 20 C -0.41 0.76 4.97 37.59 0.19 0.94 16 21 C -0.41 0.92 4.97 37.65 0.19 1.11 16 22 C -0.12 0.15 4.93 -26.46 -0.13 0.02 16 23 C -0.24 -0.46 8.67 -39.22 -0.34 -0.80 16 24 C 0.00 -0.01 9.83 -39.32 -0.39 -0.39 16 25 H 0.38 -1.47 8.74 45.56 0.40 -1.08 16 26 H 0.07 -0.13 7.96 -51.93 -0.41 -0.54 16 27 H 0.15 0.28 4.87 -52.49 -0.26 0.02 16 28 H 0.40 0.12 8.71 -40.82 -0.36 -0.24 16 29 H 0.08 -0.09 6.24 -51.93 -0.32 -0.41 16 30 H 0.07 -0.09 8.13 -51.93 -0.42 -0.51 16 31 H 0.07 -0.18 7.72 -51.93 -0.40 -0.58 16 32 H 0.08 -0.19 7.98 -51.92 -0.41 -0.60 16 33 H 0.08 -0.21 7.98 -51.93 -0.41 -0.62 16 34 H 0.07 -0.14 7.98 -51.93 -0.41 -0.56 16 35 H 0.08 -0.12 7.98 -51.93 -0.41 -0.54 16 36 H 0.06 -0.11 7.72 -51.93 -0.40 -0.51 16 37 H 0.06 -0.06 8.14 -51.93 -0.42 -0.48 16 38 H 0.06 -0.07 7.89 -51.93 -0.41 -0.48 16 39 H 0.06 -0.07 8.14 -51.93 -0.42 -0.49 16 40 H 0.06 -0.05 8.14 -51.93 -0.42 -0.48 16 41 H 0.06 -0.11 7.71 -51.93 -0.40 -0.51 16 42 H 0.07 -0.15 7.98 -51.93 -0.41 -0.56 16 43 H 0.08 -0.13 7.98 -51.93 -0.41 -0.54 16 44 H 0.08 -0.18 7.98 -51.93 -0.41 -0.59 16 45 H 0.08 -0.19 7.98 -51.93 -0.41 -0.61 16 46 H 0.07 0.01 7.47 -51.93 -0.39 -0.38 16 47 H 0.07 -0.11 7.72 -51.93 -0.40 -0.51 16 48 H 0.14 0.01 6.10 -52.49 -0.32 -0.31 16 49 H 0.14 0.02 8.06 -52.48 -0.42 -0.41 16 LS Contribution 369.64 15.07 5.57 5.57 Total: 0.00 -5.44 369.64 -11.63 -17.07 By element: Atomic # 1 Polarization: -3.82 SS G_CDS: -7.90 Total: -11.71 kcal Atomic # 6 Polarization: 4.87 SS G_CDS: -2.60 Total: 2.27 kcal Atomic # 7 Polarization: -3.02 SS G_CDS: -0.41 Total: -3.43 kcal Atomic # 8 Polarization: -0.31 SS G_CDS: -0.45 Total: -0.76 kcal Atomic # 14 Polarization: -3.16 SS G_CDS: -5.84 Total: -9.00 kcal Total LS contribution 5.57 Total: 5.57 kcal Total: -5.44 -11.63 -17.07 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_27_15739364_13915762.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -32.729 kcal (2) G-P(sol) polarization free energy of solvation -5.438 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -38.167 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.633 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.071 kcal (6) G-S(sol) free energy of system = (1) + (5) -49.800 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.69 seconds