Wall clock time and date at job start Tue Mar 9 2021 14:37:53 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50706 * 1 3 3 C 1.33330 * 125.94888 * 2 1 4 4 C 1.50699 * 122.70992 * 0.02562 * 3 2 1 5 5 O 1.42901 * 109.46913 * 113.54000 * 4 3 2 6 6 Si 1.86293 * 109.47157 * 233.53901 * 4 3 2 7 7 N 1.32115 * 114.57681 * 180.28950 * 3 2 1 8 8 C 1.29689 * 116.86909 * 359.48067 * 7 3 2 9 9 N 1.38607 * 124.95352 * 180.22729 * 8 7 3 10 10 C 1.46492 * 120.00129 * 180.27923 * 9 8 7 11 11 H 1.08998 * 112.85354 * 336.19495 * 10 9 8 12 12 C 1.53783 * 113.61300 * 107.50341 * 10 9 8 13 13 C 1.53786 * 87.08327 * 89.11547 * 12 10 9 14 14 H 1.08993 * 113.69278 * 270.87487 * 13 12 10 15 15 C 1.53002 * 113.61407 * 139.97736 * 13 12 10 16 16 F 1.39899 * 109.47331 * 322.50624 * 15 13 12 17 17 F 1.39903 * 109.46782 * 82.50815 * 15 13 12 18 18 F 1.39896 * 109.46787 * 202.50324 * 15 13 12 19 19 C 1.53780 * 113.61444 * 204.99886 * 10 9 8 20 20 S 1.70969 * 110.09734 * 0.49459 * 8 7 3 21 21 H 1.08997 * 109.46854 * 84.87600 * 1 2 3 22 22 H 1.09006 * 109.46624 * 204.87289 * 1 2 3 23 23 H 1.09001 * 109.47378 * 324.86795 * 1 2 3 24 24 H 1.09000 * 109.47252 * 353.54284 * 4 3 2 25 25 H 0.96701 * 114.00468 * 59.99772 * 5 4 3 26 26 H 1.48501 * 109.99903 * 58.68432 * 6 4 3 27 27 H 1.48507 * 110.00325 * 180.02562 * 6 4 3 28 28 H 0.97005 * 119.99968 * 0.28069 * 9 8 7 29 29 H 1.09006 * 113.61340 * 203.66042 * 12 10 9 30 30 H 1.08998 * 113.61712 * 334.56816 * 12 10 9 31 31 H 1.08995 * 113.61666 * 25.43745 * 19 10 9 32 32 H 1.09000 * 113.61605 * 156.33628 * 19 10 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5071 0.0000 0.0000 3 6 2.2898 1.0794 0.0000 4 6 1.7414 2.4830 0.0006 5 8 2.0697 3.1221 1.2358 6 14 2.4871 3.4416 -1.4120 7 7 3.5850 0.8189 -0.0061 8 6 3.9315 -0.4309 -0.0007 9 7 5.2385 -0.8925 -0.0012 10 6 5.5066 -2.3327 -0.0009 11 1 4.6808 -2.9169 0.4050 12 6 6.0354 -2.8611 -1.3448 13 6 7.4474 -2.5441 -0.8243 14 1 7.7797 -1.5307 -1.0490 15 6 8.4875 -3.6052 -1.1890 16 9 7.9044 -4.8747 -1.1151 17 9 8.9482 -3.3786 -2.4904 18 9 9.5611 -3.5324 -0.2950 19 6 6.8751 -2.7044 0.5941 20 16 2.5413 -1.4260 -0.0005 21 1 -0.3633 0.0918 -1.0235 22 1 -0.3633 -0.9324 0.4323 23 1 -0.3634 0.8404 0.5914 24 1 0.6580 2.4499 -0.1146 25 1 3.0196 3.1869 1.4049 26 1 2.1796 2.7697 -2.7001 27 1 1.9547 4.8280 -1.4222 28 1 5.9756 -0.2619 -0.0016 29 1 5.8549 -3.9252 -1.4971 30 1 5.7388 -2.2538 -2.1999 31 1 7.2563 -1.9707 1.3042 32 1 6.9241 -3.7257 0.9719 There are 50 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 50 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_27_15744636_15704122.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 14:37:53 Heat of formation + Delta-G solvation = -105.430815 kcal Electronic energy + Delta-G solvation = -21550.205534 eV Core-core repulsion = 17611.251640 eV Total energy + Delta-G solvation = -3938.953894 eV No. of doubly occupied orbitals = 50 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 295.059 amu Computer time = 0.45 seconds Orbital eigenvalues (eV) -51.09029 -48.61139 -48.58378 -41.19119 -40.43221 -37.57315 -35.51047 -32.88130 -29.42641 -28.49393 -26.96969 -25.79605 -24.57985 -24.09141 -21.28295 -20.55198 -19.42483 -19.35350 -19.08450 -18.57220 -17.93372 -17.35776 -16.73196 -16.38130 -15.77018 -15.59876 -15.49930 -15.36805 -15.11691 -15.02098 -14.78057 -14.76176 -14.38146 -14.28635 -14.16208 -14.07200 -13.67559 -13.58976 -13.47787 -12.90911 -12.50586 -12.27625 -12.01058 -11.97366 -11.65305 -11.03370 -10.70617 -10.47588 -10.04985 -8.69230 -4.93677 -0.07362 0.13247 0.69850 1.24787 1.61473 1.76560 1.79516 1.83705 1.96175 2.73219 2.80558 2.96665 3.35866 3.37089 3.47880 3.64012 3.69648 3.94795 3.99612 4.16158 4.27440 4.41600 4.52464 4.58471 4.66596 4.73605 4.84669 4.86544 4.88914 4.97405 5.19066 5.61245 6.31057 6.63952 6.86872 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.075 4.075 2 C -0.265 4.265 3 C 0.059 3.941 4 C -0.036 4.036 5 O -0.549 6.549 6 Si 0.777 3.223 7 N -0.552 5.552 8 C 0.312 3.688 9 N -0.668 5.668 10 C 0.132 3.868 11 H 0.111 0.889 12 C -0.143 4.143 13 C -0.161 4.161 14 H 0.149 0.851 15 C 0.455 3.545 16 F -0.186 7.186 17 F -0.195 7.195 18 F -0.190 7.190 19 C -0.121 4.121 20 S 0.125 5.875 21 H 0.079 0.921 22 H 0.078 0.922 23 H 0.080 0.920 24 H 0.122 0.878 25 H 0.393 0.607 26 H -0.297 1.297 27 H -0.282 1.282 28 H 0.421 0.579 29 H 0.114 0.886 30 H 0.090 0.910 31 H 0.106 0.894 32 H 0.118 0.882 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.666 -1.883 0.965 2.219 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.134 4.134 2 C -0.388 4.388 3 C -0.072 4.072 4 C -0.149 4.149 5 O -0.356 6.356 6 Si 0.682 3.318 7 N -0.278 5.278 8 C -0.059 4.059 9 N -0.309 5.309 10 C 0.026 3.974 11 H 0.129 0.871 12 C -0.182 4.182 13 C -0.180 4.180 14 H 0.166 0.834 15 C 0.401 3.599 16 F -0.168 7.168 17 F -0.176 7.176 18 F -0.172 7.172 19 C -0.159 4.159 20 S 0.374 5.626 21 H 0.098 0.902 22 H 0.096 0.904 23 H 0.099 0.901 24 H 0.139 0.861 25 H 0.243 0.757 26 H -0.224 1.224 27 H -0.209 1.209 28 H 0.261 0.739 29 H 0.133 0.867 30 H 0.108 0.892 31 H 0.124 0.876 32 H 0.136 0.864 Dipole moment (debyes) X Y Z Total from point charges 0.191 -2.302 0.277 2.326 hybrid contribution -0.016 0.423 -0.030 0.424 sum 0.176 -1.879 0.247 1.903 Atomic orbital electron populations 1.20264 0.86027 1.03838 1.03252 1.25479 1.02226 0.93916 1.17200 1.20180 0.87273 0.97452 1.02254 1.24803 1.03252 0.89835 0.97027 1.86439 1.31128 1.79622 1.38427 0.92992 0.90415 0.75590 0.72846 1.65941 1.16986 1.17201 1.27699 1.23453 0.92524 0.91591 0.98354 1.43593 1.01280 1.06543 1.79438 1.21863 0.99029 0.79605 0.96931 0.87118 1.23657 0.91471 1.04234 0.98815 1.24188 0.93293 0.98993 1.01548 0.83351 1.20789 0.82226 0.82913 0.73969 1.93157 1.83928 1.43729 1.95987 1.93185 1.90248 1.94562 1.39611 1.93187 1.59211 1.96386 1.68396 1.23366 0.92838 1.05548 0.94130 1.83825 0.95846 1.09288 1.73618 0.90192 0.90359 0.90148 0.86090 0.75719 1.22371 1.20914 0.73930 0.86728 0.89163 0.87590 0.86417 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.07 0.08 9.71 71.24 0.69 0.77 16 2 C -0.27 -0.72 6.57 24.58 0.16 -0.55 16 3 C 0.06 0.23 5.20 41.41 0.22 0.44 16 4 C -0.04 -0.10 2.84 71.24 0.20 0.10 16 5 O -0.55 -2.03 12.88 -148.98 -1.92 -3.95 16 6 Si 0.78 1.63 32.61 68.60 2.24 3.87 16 7 N -0.55 -1.54 9.76 -189.86 -1.85 -3.40 16 8 C 0.31 -0.05 8.24 179.32 1.48 1.43 16 9 N -0.67 4.08 5.42 -327.91 -1.78 2.30 16 10 C 0.13 -1.18 4.31 45.52 0.20 -0.99 16 11 H 0.11 -1.02 7.06 -2.39 -0.02 -1.03 16 12 C -0.14 1.22 7.32 31.12 0.23 1.45 16 13 C -0.16 1.35 3.68 -10.26 -0.04 1.31 16 14 H 0.15 -1.64 8.14 -2.39 -0.02 -1.66 16 15 C 0.45 -0.99 3.02 71.98 0.22 -0.77 16 16 F -0.19 0.12 15.75 44.97 0.71 0.83 16 17 F -0.19 -0.32 17.32 44.97 0.78 0.45 16 18 F -0.19 -0.11 17.18 44.97 0.77 0.67 16 19 C -0.12 1.26 7.18 31.12 0.22 1.49 16 20 S 0.13 -0.07 21.69 -56.49 -1.23 -1.29 16 21 H 0.08 -0.21 8.14 -2.39 -0.02 -0.23 16 22 H 0.08 -0.22 8.14 -2.38 -0.02 -0.24 16 23 H 0.08 -0.11 7.17 -2.39 -0.02 -0.12 16 24 H 0.12 0.19 6.33 -2.39 -0.02 0.18 16 25 H 0.39 -0.81 8.70 -74.06 -0.64 -1.46 16 26 H -0.30 -2.37 7.11 99.48 0.71 -1.66 16 27 H -0.28 -1.97 7.11 99.48 0.71 -1.26 16 28 H 0.42 -3.54 8.83 -92.70 -0.82 -4.36 16 29 H 0.11 -1.00 7.13 -2.38 -0.02 -1.02 16 30 H 0.09 -0.67 8.14 -2.39 -0.02 -0.69 16 31 H 0.11 -1.25 8.14 -2.39 -0.02 -1.27 16 32 H 0.12 -1.28 7.88 -2.39 -0.02 -1.30 16 Total: 0.00 -13.02 298.69 1.07 -11.95 By element: Atomic # 1 Polarization: -15.88 SS G_CDS: -0.23 Total: -16.11 kcal Atomic # 6 Polarization: 1.10 SS G_CDS: 3.58 Total: 4.67 kcal Atomic # 7 Polarization: 2.53 SS G_CDS: -3.63 Total: -1.10 kcal Atomic # 8 Polarization: -2.03 SS G_CDS: -1.92 Total: -3.95 kcal Atomic # 9 Polarization: -0.31 SS G_CDS: 2.26 Total: 1.95 kcal Atomic # 14 Polarization: 1.63 SS G_CDS: 2.24 Total: 3.87 kcal Atomic # 16 Polarization: -0.07 SS G_CDS: -1.23 Total: -1.29 kcal Total: -13.02 1.07 -11.95 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_27_15744636_15704122.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -93.481 kcal (2) G-P(sol) polarization free energy of solvation -13.018 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -106.499 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.068 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -11.950 kcal (6) G-S(sol) free energy of system = (1) + (5) -105.431 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.45 seconds