Wall clock time and date at job start Tue Mar 9 2021 14:40:59 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53005 * 1 3 3 C 1.53006 * 109.47238 * 2 1 4 4 C 1.52989 * 109.47145 * 240.00008 * 2 1 3 5 5 O 1.45195 * 109.47167 * 119.99856 * 2 1 3 6 6 C 1.34638 * 117.00012 * 60.00109 * 5 2 1 7 7 O 1.21507 * 119.99923 * 359.97438 * 6 5 2 8 8 N 1.34775 * 120.00216 * 180.02562 * 6 5 2 9 9 C 1.46495 * 120.00286 * 180.02562 * 8 6 5 10 10 H 1.09007 * 112.84696 * 336.18819 * 9 8 6 11 11 C 1.53786 * 113.69451 * 107.45618 * 9 8 6 12 12 C 1.53784 * 87.07935 * 139.99421 * 11 9 8 13 13 F 1.39901 * 113.69071 * 89.12900 * 12 11 9 14 14 C 1.52998 * 113.61203 * 220.01715 * 12 11 9 15 15 N 1.46493 * 109.47626 * 277.49841 * 14 12 11 16 16 C 1.38609 * 120.00218 * 180.02562 * 15 14 12 17 17 N 1.29683 * 124.94818 * 0.02562 * 16 15 14 18 18 C 1.32124 * 116.86353 * 179.97438 * 17 16 15 19 19 C 1.33323 * 114.58053 * 0.02562 * 18 17 16 20 20 C 1.50703 * 125.94829 * 180.02562 * 19 18 17 21 21 O 1.42894 * 109.47608 * 299.99719 * 20 19 18 22 22 Si 1.86308 * 109.46832 * 179.97438 * 20 19 18 23 23 S 1.70968 * 124.94860 * 180.02562 * 16 15 14 24 24 C 1.53781 * 87.08425 * 334.56913 * 12 11 9 25 25 H 1.09000 * 109.46611 * 300.00077 * 1 2 3 26 26 H 1.08998 * 109.46788 * 59.99517 * 1 2 3 27 27 H 1.08993 * 109.47047 * 179.97438 * 1 2 3 28 28 H 1.08996 * 109.47336 * 180.02562 * 3 2 1 29 29 H 1.09003 * 109.47043 * 300.00401 * 3 2 1 30 30 H 1.09000 * 109.46885 * 59.99811 * 3 2 1 31 31 H 1.09000 * 109.47615 * 299.99796 * 4 2 1 32 32 H 1.09004 * 109.47476 * 60.00168 * 4 2 1 33 33 H 1.09000 * 109.47553 * 180.02562 * 4 2 1 34 34 H 0.97005 * 120.00081 * 359.97438 * 8 6 5 35 35 H 1.08994 * 113.61408 * 25.44387 * 11 9 8 36 36 H 1.08998 * 113.61438 * 254.53965 * 11 9 8 37 37 H 1.09000 * 109.46798 * 157.49563 * 14 12 11 38 38 H 1.08998 * 109.47132 * 37.50177 * 14 12 11 39 39 H 0.96999 * 119.99712 * 0.02562 * 15 14 12 40 40 H 1.08002 * 122.70395 * 179.97438 * 18 17 16 41 41 H 1.09003 * 109.46961 * 60.00328 * 20 19 18 42 42 H 0.96704 * 113.99644 * 300.00758 * 21 20 19 43 43 H 1.48498 * 109.99989 * 58.68031 * 22 20 19 44 44 H 1.48499 * 109.99845 * 180.02562 * 22 20 19 45 45 H 1.08994 * 113.61350 * 139.98158 * 24 12 11 46 46 H 1.09002 * 113.61538 * 270.80657 * 24 12 11 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5301 0.0000 0.0000 3 6 2.0401 1.4425 0.0000 4 6 2.0400 -0.7212 -1.2491 5 8 2.0140 -0.6844 1.1855 6 6 1.6523 -1.9723 1.3383 7 8 0.9510 -2.5094 0.5041 8 7 2.0673 -2.6654 2.4171 9 6 1.6741 -4.0668 2.5831 10 1 0.7601 -4.3166 2.0443 11 6 2.8214 -5.0628 2.3450 12 6 2.2719 -5.8604 3.5396 13 9 1.3085 -6.8110 3.1854 14 6 3.3619 -6.4298 4.4498 15 7 3.8653 -7.6836 3.8836 16 6 4.8643 -8.3875 4.5375 17 7 5.4199 -8.0263 5.6522 18 6 6.3588 -8.8200 6.1360 19 6 6.6075 -9.9005 5.3955 20 6 7.6214 -10.9714 5.7056 21 8 8.9246 -10.3890 5.7715 22 14 7.5862 -12.2663 4.3665 23 16 5.5436 -9.8586 3.9920 24 6 1.6743 -4.5375 4.0472 25 1 -0.3632 0.5139 0.8900 26 1 -0.3633 0.5139 -0.8899 27 1 -0.3633 -1.0276 -0.0005 28 1 3.1301 1.4426 -0.0005 29 1 1.6767 1.9564 -0.8900 30 1 1.6767 1.9564 0.8900 31 1 1.6768 -1.7489 -1.2492 32 1 1.6767 -0.2074 -2.1392 33 1 3.1300 -0.7216 -1.2490 34 1 2.6269 -2.2365 3.0834 35 1 3.8104 -4.6397 2.5204 36 1 2.7491 -5.5933 1.3956 37 1 2.9464 -6.6191 5.4396 38 1 4.1793 -5.7132 4.5299 39 1 3.4995 -8.0211 3.0510 40 1 6.8831 -8.6101 7.0566 41 1 7.3808 -11.4331 6.6633 42 1 9.2051 -9.9591 4.9519 43 1 7.8808 -11.6442 3.0507 44 1 8.5813 -13.3285 4.6609 45 1 0.6761 -4.6438 4.4718 46 1 2.3493 -3.9713 4.6891 There are 64 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 64 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV m_27_16499082_15704118.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 14:40:59 Heat of formation + Delta-G solvation = -79.334105 kcal Electronic energy + Delta-G solvation = -29602.736090 eV Core-core repulsion = 25150.654874 eV Total energy + Delta-G solvation = -4452.081216 eV No. of doubly occupied orbitals = 64 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 360.135 amu Computer time = 0.83 seconds Orbital eigenvalues (eV) -49.00589 -41.82868 -40.75669 -40.06932 -38.21280 -37.82866 -36.61974 -35.28834 -34.06547 -31.56910 -29.35898 -28.35796 -28.31938 -27.36657 -26.43395 -25.10866 -24.14282 -22.68712 -21.53367 -20.89027 -20.79096 -19.91085 -19.17267 -18.30325 -17.99742 -17.35146 -17.27728 -17.19748 -16.70947 -16.59522 -16.36768 -16.05044 -15.76396 -15.70034 -15.47304 -15.34940 -15.29638 -14.91270 -14.65406 -14.45611 -14.13079 -13.88385 -13.80963 -13.44856 -13.40774 -13.07146 -12.98022 -12.91771 -12.86168 -12.85277 -12.40939 -12.37148 -12.28098 -12.06019 -11.85210 -11.73805 -11.34109 -11.29918 -11.02414 -10.92728 -10.31096 -10.29355 -10.20961 -8.80073 -5.06241 -0.05570 -0.00226 0.67690 1.10077 1.23871 1.54956 1.78328 1.89800 1.97985 2.00342 2.75804 2.83765 2.94991 3.12554 3.32383 3.33223 3.36740 3.66858 3.74276 3.80018 3.91192 3.93939 4.05064 4.15058 4.24665 4.36790 4.40828 4.52793 4.53091 4.54372 4.60286 4.63026 4.67216 4.72141 4.75415 4.83178 4.90050 4.92471 5.02981 5.05803 5.18526 5.33387 5.40933 5.54201 5.69137 5.93228 6.31373 6.34270 6.95340 7.34594 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.184 4.184 2 C 0.137 3.863 3 C -0.142 4.142 4 C -0.184 4.184 5 O -0.364 6.364 6 C 0.651 3.349 7 O -0.564 6.564 8 N -0.701 5.701 9 C 0.146 3.854 10 H 0.128 0.872 11 C -0.169 4.169 12 C 0.084 3.916 13 F -0.180 7.180 14 C 0.133 3.867 15 N -0.692 5.692 16 C 0.324 3.676 17 N -0.551 5.551 18 C 0.119 3.881 19 C -0.304 4.304 20 C -0.017 4.017 21 O -0.526 6.526 22 Si 0.653 3.347 23 S 0.095 5.905 24 C -0.155 4.155 25 H 0.060 0.940 26 H 0.072 0.928 27 H 0.087 0.913 28 H 0.067 0.933 29 H 0.082 0.918 30 H 0.067 0.933 31 H 0.087 0.913 32 H 0.072 0.928 33 H 0.060 0.940 34 H 0.408 0.592 35 H 0.108 0.892 36 H 0.091 0.909 37 H 0.083 0.917 38 H 0.090 0.910 39 H 0.418 0.582 40 H 0.177 0.823 41 H 0.126 0.874 42 H 0.377 0.623 43 H -0.243 1.243 44 H -0.237 1.237 45 H 0.098 0.902 46 H 0.112 0.888 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.597 1.642 -0.091 1.749 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.242 4.242 2 C 0.100 3.900 3 C -0.199 4.199 4 C -0.241 4.241 5 O -0.279 6.279 6 C 0.405 3.595 7 O -0.452 6.452 8 N -0.360 5.360 9 C 0.041 3.959 10 H 0.146 0.854 11 C -0.208 4.208 12 C 0.065 3.935 13 F -0.160 7.160 14 C 0.006 3.994 15 N -0.332 5.332 16 C -0.046 4.046 17 N -0.276 5.276 18 C -0.033 4.033 19 C -0.427 4.427 20 C -0.130 4.130 21 O -0.332 6.332 22 Si 0.553 3.447 23 S 0.345 5.655 24 C -0.194 4.194 25 H 0.079 0.921 26 H 0.091 0.909 27 H 0.106 0.894 28 H 0.086 0.914 29 H 0.101 0.899 30 H 0.086 0.914 31 H 0.106 0.894 32 H 0.091 0.909 33 H 0.079 0.921 34 H 0.244 0.756 35 H 0.126 0.874 36 H 0.110 0.890 37 H 0.101 0.899 38 H 0.108 0.892 39 H 0.256 0.744 40 H 0.194 0.806 41 H 0.143 0.857 42 H 0.225 0.775 43 H -0.168 1.168 44 H -0.160 1.160 45 H 0.117 0.883 46 H 0.130 0.870 Dipole moment (debyes) X Y Z Total from point charges -0.961 0.806 -1.153 1.703 hybrid contribution 1.096 1.139 0.514 1.662 sum 0.135 1.945 -0.639 2.051 Atomic orbital electron populations 1.22525 0.93783 1.05058 1.02784 1.22136 0.94486 0.91574 0.81792 1.21882 1.02338 0.92308 1.03389 1.22521 1.01603 1.03440 0.96573 1.86310 1.71435 1.23326 1.46805 1.18143 0.78562 0.80628 0.82171 1.90928 1.40764 1.70514 1.43008 1.44632 1.55555 1.11845 1.23936 1.22459 0.99035 0.77967 0.96414 0.85438 1.24247 1.00512 0.97113 0.98940 1.21813 0.87656 0.86875 0.97182 1.92914 1.64609 1.65644 1.92847 1.21768 0.95190 0.85670 0.96781 1.43760 1.38504 1.24202 1.26750 1.23669 0.93807 0.94066 0.93088 1.66486 1.15031 1.34432 1.11666 1.21319 0.92979 0.89071 0.99888 1.25552 1.10168 1.06266 1.00727 1.24073 0.80667 0.97844 1.10432 1.86616 1.31220 1.75255 1.40145 0.95185 0.91637 0.80656 0.77266 1.84053 1.34750 1.20795 1.25947 1.23987 1.04187 0.94037 0.97183 0.92074 0.90877 0.89436 0.91387 0.89890 0.91359 0.89445 0.90874 0.92121 0.75619 0.87359 0.89007 0.89859 0.89216 0.74380 0.80634 0.85668 0.77543 1.16753 1.16038 0.88306 0.86962 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.18 8.37 37.16 0.31 0.14 16 2 C 0.14 0.12 1.13 -90.62 -0.10 0.02 16 3 C -0.14 0.15 8.85 37.16 0.33 0.48 16 4 C -0.18 -0.17 8.37 37.15 0.31 0.14 16 5 O -0.36 -0.64 9.94 -40.32 -0.40 -1.04 16 6 C 0.65 1.29 8.06 54.05 0.44 1.72 16 7 O -0.56 -2.50 11.48 -19.28 -0.22 -2.72 16 8 N -0.70 0.93 5.36 -57.93 -0.31 0.61 16 9 C 0.15 -0.28 4.22 -67.12 -0.28 -0.57 16 10 H 0.13 0.00 7.46 -51.93 -0.39 -0.39 16 11 C -0.17 0.47 7.33 -25.91 -0.19 0.28 16 12 C 0.08 -0.23 1.67 -89.81 -0.15 -0.38 16 13 F -0.18 0.04 16.80 2.25 0.04 0.08 16 14 C 0.13 -0.29 5.64 -4.05 -0.02 -0.31 16 15 N -0.69 0.71 5.62 -62.30 -0.35 0.36 16 16 C 0.32 0.29 8.09 -87.68 -0.71 -0.42 16 17 N -0.55 -1.28 10.14 -15.21 -0.15 -1.44 16 18 C 0.12 0.17 11.22 -19.14 -0.21 -0.04 16 19 C -0.30 -0.14 5.74 -36.02 -0.21 -0.35 16 20 C -0.02 0.00 2.99 36.01 0.11 0.11 16 21 O -0.53 -0.47 12.87 -35.23 -0.45 -0.92 16 22 Si 0.65 -0.45 31.06 -169.99 -5.28 -5.73 16 23 S 0.10 -0.01 20.57 -107.50 -2.21 -2.22 16 24 C -0.15 0.59 7.29 -25.92 -0.19 0.40 16 25 H 0.06 0.04 8.14 -51.93 -0.42 -0.38 16 26 H 0.07 -0.02 8.14 -51.93 -0.42 -0.45 16 27 H 0.09 0.26 5.88 -51.93 -0.31 -0.04 16 28 H 0.07 -0.08 8.14 -51.93 -0.42 -0.50 16 29 H 0.08 -0.19 8.14 -51.93 -0.42 -0.61 16 30 H 0.07 -0.08 8.14 -51.93 -0.42 -0.50 16 31 H 0.09 0.26 5.88 -51.93 -0.31 -0.04 16 32 H 0.07 -0.02 8.14 -51.93 -0.42 -0.45 16 33 H 0.06 0.04 8.14 -51.93 -0.42 -0.38 16 34 H 0.41 -1.45 8.84 -40.82 -0.36 -1.81 16 35 H 0.11 -0.40 7.96 -51.93 -0.41 -0.81 16 36 H 0.09 -0.18 8.14 -51.93 -0.42 -0.60 16 37 H 0.08 -0.11 8.14 -51.93 -0.42 -0.54 16 38 H 0.09 -0.23 7.94 -51.93 -0.41 -0.64 16 39 H 0.42 -0.91 8.31 -40.82 -0.34 -1.25 16 40 H 0.18 0.05 8.06 -52.49 -0.42 -0.37 16 41 H 0.13 -0.16 7.96 -51.93 -0.41 -0.57 16 42 H 0.38 -0.65 8.70 45.56 0.40 -0.25 16 43 H -0.24 -0.30 7.11 56.52 0.40 0.11 16 44 H -0.24 -0.47 7.11 56.52 0.40 -0.07 16 45 H 0.10 -0.35 8.14 -51.93 -0.42 -0.78 16 46 H 0.11 -0.63 8.08 -51.93 -0.42 -1.05 16 LS Contribution 393.51 15.07 5.93 5.93 Total: 0.00 -7.44 393.51 -10.80 -18.23 By element: Atomic # 1 Polarization: -5.57 SS G_CDS: -6.81 Total: -12.38 kcal Atomic # 6 Polarization: 1.81 SS G_CDS: -0.57 Total: 1.23 kcal Atomic # 7 Polarization: 0.36 SS G_CDS: -0.82 Total: -0.46 kcal Atomic # 8 Polarization: -3.61 SS G_CDS: -1.08 Total: -4.69 kcal Atomic # 9 Polarization: 0.04 SS G_CDS: 0.04 Total: 0.08 kcal Atomic # 14 Polarization: -0.45 SS G_CDS: -5.28 Total: -5.73 kcal Atomic # 16 Polarization: -0.01 SS G_CDS: -2.21 Total: -2.22 kcal Total LS contribution 5.93 Total: 5.93 kcal Total: -7.44 -10.80 -18.23 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_27_16499082_15704118.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -61.100 kcal (2) G-P(sol) polarization free energy of solvation -7.439 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -68.539 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.795 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.234 kcal (6) G-S(sol) free energy of system = (1) + (5) -79.334 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.83 seconds