Wall clock time and date at job start Tue Mar 9 2021 14:41:37 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42903 * 1 3 3 Si 1.86296 * 109.47309 * 2 1 4 4 C 1.50694 * 109.47154 * 239.99776 * 2 1 3 5 5 C 1.38610 * 120.72303 * 300.00674 * 4 2 1 6 6 N 1.32275 * 119.19798 * 180.02562 * 5 4 2 7 7 C 1.32494 * 120.74098 * 359.97438 * 6 5 4 8 8 N 1.38408 * 119.21537 * 180.02562 * 7 6 5 9 9 C 1.46500 * 119.99769 * 180.02562 * 8 7 6 10 10 C 1.53002 * 109.46766 * 274.99716 * 9 8 7 11 11 C 1.52997 * 109.47092 * 180.02562 * 10 9 8 12 12 C 1.53006 * 109.47164 * 60.00174 * 11 10 9 13 13 C 1.52999 * 109.46623 * 299.99900 * 12 11 10 14 14 C 1.52997 * 109.46927 * 155.00245 * 9 8 7 15 15 C 1.52997 * 109.47457 * 59.99484 * 14 9 8 16 16 C 1.53002 * 109.46817 * 60.00169 * 15 14 9 17 17 O 1.42903 * 109.46923 * 179.97438 * 16 15 14 18 18 C 1.52997 * 109.47127 * 59.99836 * 12 11 10 19 19 C 1.52996 * 109.47346 * 299.99737 * 16 15 14 20 20 N 1.32489 * 121.56688 * 0.27310 * 7 6 5 21 21 C 1.32286 * 120.73744 * 359.44554 * 20 7 6 22 22 H 0.96706 * 114.00006 * 300.00186 * 1 2 3 23 23 H 1.09000 * 109.46855 * 119.99899 * 2 1 3 24 24 H 1.48507 * 109.99970 * 178.67988 * 3 2 1 25 25 H 1.48497 * 110.00169 * 300.00172 * 3 2 1 26 26 H 1.07998 * 120.39716 * 0.03486 * 5 4 2 27 27 H 0.97001 * 119.99660 * 0.02562 * 8 7 6 28 28 H 1.09000 * 109.47381 * 34.99889 * 9 8 7 29 29 H 1.09002 * 109.47067 * 60.00243 * 10 9 8 30 30 H 1.09000 * 109.47140 * 300.00226 * 11 10 9 31 31 H 1.09001 * 109.47375 * 180.02562 * 11 10 9 32 32 H 1.08996 * 109.46884 * 180.02562 * 12 11 10 33 33 H 1.09000 * 109.47486 * 299.99829 * 13 12 11 34 34 H 1.09002 * 109.46716 * 179.97438 * 13 12 11 35 35 H 1.09001 * 109.46989 * 299.99155 * 14 9 8 36 36 H 1.08993 * 109.47194 * 299.99651 * 15 14 9 37 37 H 1.09002 * 109.46695 * 179.97438 * 15 14 9 38 38 H 0.96696 * 114.00096 * 179.97438 * 17 16 15 39 39 H 1.09002 * 109.47153 * 180.02562 * 18 12 11 40 40 H 1.09001 * 109.46832 * 60.00321 * 18 12 11 41 41 H 1.08992 * 109.47554 * 180.02562 * 19 16 15 42 42 H 1.09004 * 109.47108 * 300.00289 * 19 16 15 43 43 H 1.08003 * 120.39823 * 180.29843 * 21 20 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9314 -0.7104 -1.2304 5 6 1.6056 -2.0372 -1.4646 6 7 2.0634 -2.6314 -2.5541 7 6 2.8242 -1.9726 -3.4160 8 7 3.2856 -2.6252 -4.5460 9 6 4.1284 -1.9134 -5.5100 10 6 3.2422 -1.1465 -6.4936 11 6 4.1223 -0.4037 -7.5007 12 6 4.9819 -1.4110 -8.2673 13 6 5.8681 -2.1778 -7.2836 14 6 4.9883 -2.9203 -6.2765 15 6 4.0819 -3.9035 -7.0198 16 6 3.1958 -3.1366 -8.0034 17 8 2.3496 -4.0550 -8.6981 18 6 4.0751 -2.3942 -9.0101 19 6 2.3357 -2.1298 -7.2370 20 7 3.1578 -0.7056 -3.2193 21 6 2.7287 -0.0512 -2.1527 22 1 -0.3933 0.4418 0.7651 23 1 1.7923 -0.5138 0.8900 24 1 3.5347 1.7702 0.0322 25 1 1.5616 2.4679 -1.2084 26 1 0.9854 -2.5791 -0.7661 27 1 3.0508 -3.5537 -4.6997 28 1 4.7741 -1.2129 -4.9804 29 1 2.6295 -0.4292 -5.9475 30 1 4.7683 0.2968 -6.9715 31 1 3.4910 0.1430 -8.2012 32 1 5.6092 -0.8817 -8.9844 33 1 6.5141 -1.4773 -6.7544 34 1 6.4801 -2.8957 -7.8297 35 1 5.6197 -3.4666 -5.5758 36 1 3.4550 -4.4331 -6.3026 37 1 4.6947 -4.6205 -7.5663 38 1 1.7587 -3.6374 -9.3396 39 1 4.6874 -3.1120 -9.5558 40 1 3.4438 -1.8478 -9.7109 41 1 1.7041 -1.5837 -7.9376 42 1 1.7087 -2.6594 -6.5197 43 1 3.0001 0.9830 -2.0003 There are 56 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 56 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV m_27_17849788_12175864.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 14:41:37 Heat of formation + Delta-G solvation = -27.423422 kcal Electronic energy + Delta-G solvation = -26346.349190 eV Core-core repulsion = 22778.352010 eV Total energy + Delta-G solvation = -3567.997181 eV No. of doubly occupied orbitals = 56 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 304.157 amu Computer time = 0.66 seconds Orbital eigenvalues (eV) -42.87630 -41.87903 -38.17279 -37.59655 -36.44726 -34.68983 -33.84741 -33.41582 -31.97456 -31.17666 -27.25139 -27.04630 -26.15200 -25.48925 -23.24360 -22.78707 -22.36651 -22.06310 -19.58103 -18.90382 -18.49138 -18.21168 -17.83494 -16.73365 -16.31051 -16.17001 -15.93519 -15.74209 -15.51695 -15.40425 -15.23219 -14.90534 -14.78109 -14.62765 -14.31547 -13.99418 -13.75326 -13.58253 -13.39246 -13.16119 -13.05668 -12.44445 -12.26353 -12.07008 -11.98961 -11.94827 -11.81231 -11.77098 -11.62103 -11.47220 -11.10243 -10.74261 -10.55560 -10.46913 -9.93056 -9.04025 -5.06913 0.08282 0.19431 1.20946 1.56634 1.82196 1.88361 2.81920 3.01776 3.13561 3.34959 3.37884 3.40773 3.59545 3.73406 3.75439 3.85654 3.89180 3.92741 4.04555 4.08684 4.11297 4.15374 4.17396 4.22675 4.26648 4.46840 4.50701 4.60648 4.61566 4.67797 4.78402 4.88048 4.90893 4.93533 4.96263 4.97935 5.04416 5.09219 5.19996 5.22646 5.32716 5.38801 5.42124 5.81681 6.03516 6.43557 6.58152 6.69277 7.32522 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.548 6.548 2 C -0.050 4.050 3 Si 0.680 3.320 4 C -0.250 4.250 5 C 0.228 3.772 6 N -0.568 5.568 7 C 0.569 3.431 8 N -0.688 5.688 9 C 0.170 3.830 10 C -0.092 4.092 11 C -0.108 4.108 12 C -0.086 4.086 13 C -0.107 4.107 14 C -0.091 4.091 15 C -0.100 4.100 16 C 0.136 3.864 17 O -0.561 6.561 18 C -0.138 4.138 19 C -0.136 4.136 20 N -0.560 5.560 21 C 0.193 3.807 22 H 0.384 0.616 23 H 0.076 0.924 24 H -0.253 1.253 25 H -0.249 1.249 26 H 0.172 0.828 27 H 0.414 0.586 28 H 0.095 0.905 29 H 0.078 0.922 30 H 0.069 0.931 31 H 0.067 0.933 32 H 0.078 0.922 33 H 0.071 0.929 34 H 0.073 0.927 35 H 0.085 0.915 36 H 0.067 0.933 37 H 0.076 0.924 38 H 0.377 0.623 39 H 0.072 0.928 40 H 0.066 0.934 41 H 0.065 0.935 42 H 0.069 0.931 43 H 0.156 0.844 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.634 3.035 2.472 3.965 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.354 6.354 2 C -0.162 4.162 3 Si 0.581 3.419 4 C -0.258 4.258 5 C 0.059 3.941 6 N -0.289 5.289 7 C 0.212 3.788 8 N -0.324 5.324 9 C 0.065 3.935 10 C -0.112 4.112 11 C -0.146 4.146 12 C -0.104 4.104 13 C -0.145 4.145 14 C -0.110 4.110 15 C -0.138 4.138 16 C 0.096 3.904 17 O -0.367 6.367 18 C -0.175 4.175 19 C -0.174 4.174 20 N -0.282 5.282 21 C 0.025 3.975 22 H 0.231 0.769 23 H 0.094 0.906 24 H -0.177 1.177 25 H -0.174 1.174 26 H 0.189 0.811 27 H 0.253 0.747 28 H 0.113 0.887 29 H 0.096 0.904 30 H 0.088 0.912 31 H 0.086 0.914 32 H 0.096 0.904 33 H 0.089 0.911 34 H 0.091 0.909 35 H 0.103 0.897 36 H 0.086 0.914 37 H 0.095 0.905 38 H 0.224 0.776 39 H 0.091 0.909 40 H 0.084 0.916 41 H 0.083 0.917 42 H 0.088 0.912 43 H 0.173 0.827 Dipole moment (debyes) X Y Z Total from point charges 2.011 2.478 0.876 3.309 hybrid contribution -0.791 0.010 0.214 0.820 sum 1.219 2.488 1.090 2.977 Atomic orbital electron populations 1.86489 1.17301 1.81821 1.49823 1.24296 0.85585 1.09894 0.96416 0.95096 0.80839 0.78160 0.87799 1.20714 1.07041 0.97634 1.00414 1.22816 0.89869 0.90506 0.90902 1.68006 1.16001 1.39330 1.05590 1.19380 0.86869 0.85578 0.86966 1.44354 1.54071 1.14585 1.19439 1.20966 0.90870 0.93546 0.88092 1.21419 0.96846 0.97089 0.95878 1.21559 0.98161 0.97305 0.97607 1.21070 0.96418 0.95862 0.97067 1.21544 0.97133 0.99347 0.96499 1.21353 0.96471 0.96040 0.97182 1.21427 0.97385 0.97516 0.97436 1.21043 0.89531 0.88523 0.91318 1.86551 1.55213 1.36948 1.57940 1.22192 0.98866 0.98616 0.97861 1.22175 0.98074 0.97370 0.99809 1.67909 1.28434 1.08654 1.23246 1.22573 0.89590 0.98326 0.86972 0.76853 0.90619 1.17735 1.17356 0.81099 0.74713 0.88655 0.90405 0.91201 0.91430 0.90365 0.91066 0.90880 0.89672 0.91406 0.90501 0.77588 0.90940 0.91565 0.91653 0.91197 0.82696 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 0.36 12.76 -35.23 -0.45 -0.09 16 2 C -0.05 0.04 2.84 36.00 0.10 0.14 16 3 Si 0.68 -1.22 29.87 -169.99 -5.08 -6.30 16 4 C -0.25 -0.56 5.43 -104.35 -0.57 -1.12 16 5 C 0.23 0.63 10.92 -17.22 -0.19 0.44 16 6 N -0.57 -2.48 10.46 -13.93 -0.15 -2.62 16 7 C 0.57 2.33 8.40 -322.81 -2.71 -0.38 16 8 N -0.69 -1.35 4.38 -55.80 -0.24 -1.60 16 9 C 0.17 0.12 2.05 -67.93 -0.14 -0.02 16 10 C -0.09 -0.06 2.89 -90.62 -0.26 -0.33 16 11 C -0.11 0.06 5.19 -26.73 -0.14 -0.08 16 12 C -0.09 0.09 3.20 -90.62 -0.29 -0.20 16 13 C -0.11 0.13 5.19 -26.76 -0.14 -0.01 16 14 C -0.09 0.05 2.88 -90.65 -0.26 -0.21 16 15 C -0.10 -0.03 4.67 -26.73 -0.12 -0.16 16 16 C 0.14 0.05 1.15 -90.67 -0.10 -0.05 16 17 O -0.56 -0.85 12.98 -35.23 -0.46 -1.31 16 18 C -0.14 0.08 4.81 -26.78 -0.13 -0.05 16 19 C -0.14 -0.10 4.66 -26.73 -0.12 -0.22 16 20 N -0.56 -2.37 9.20 -13.93 -0.13 -2.50 16 21 C 0.19 0.61 9.92 -17.22 -0.17 0.44 16 22 H 0.38 -2.17 8.74 45.56 0.40 -1.77 16 23 H 0.08 -0.20 7.96 -51.93 -0.41 -0.62 16 24 H -0.25 -0.13 7.11 56.52 0.40 0.27 16 25 H -0.25 -0.36 7.11 56.52 0.40 0.04 16 26 H 0.17 0.07 8.06 -52.49 -0.42 -0.35 16 27 H 0.41 0.61 6.98 -40.82 -0.28 0.32 16 28 H 0.10 0.17 7.50 -51.93 -0.39 -0.22 16 29 H 0.08 0.20 8.14 -51.93 -0.42 -0.22 16 30 H 0.07 -0.04 8.14 -51.93 -0.42 -0.46 16 31 H 0.07 -0.04 8.14 -51.93 -0.42 -0.46 16 32 H 0.08 -0.12 8.14 -51.93 -0.42 -0.54 16 33 H 0.07 -0.11 8.14 -51.93 -0.42 -0.53 16 34 H 0.07 -0.11 8.14 -51.93 -0.42 -0.53 16 35 H 0.08 -0.06 8.14 -51.93 -0.42 -0.48 16 36 H 0.07 0.05 6.50 -51.93 -0.34 -0.29 16 37 H 0.08 0.04 8.14 -51.93 -0.42 -0.38 16 38 H 0.38 -0.66 9.04 45.56 0.41 -0.24 16 39 H 0.07 -0.01 8.14 -51.93 -0.42 -0.43 16 40 H 0.07 -0.06 8.14 -51.93 -0.42 -0.49 16 41 H 0.06 0.02 8.14 -51.93 -0.42 -0.40 16 42 H 0.07 0.16 7.60 -51.93 -0.39 -0.24 16 43 H 0.16 0.28 5.04 -52.48 -0.26 0.01 16 LS Contribution 325.06 15.07 4.90 4.90 Total: 0.00 -6.93 325.06 -12.40 -19.32 By element: Atomic # 1 Polarization: -2.46 SS G_CDS: -5.55 Total: -8.00 kcal Atomic # 6 Polarization: 3.44 SS G_CDS: -5.25 Total: -1.80 kcal Atomic # 7 Polarization: -6.20 SS G_CDS: -0.52 Total: -6.72 kcal Atomic # 8 Polarization: -0.49 SS G_CDS: -0.91 Total: -1.40 kcal Atomic # 14 Polarization: -1.22 SS G_CDS: -5.08 Total: -6.30 kcal Total LS contribution 4.90 Total: 4.90 kcal Total: -6.93 -12.40 -19.32 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_27_17849788_12175864.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -8.100 kcal (2) G-P(sol) polarization free energy of solvation -6.926 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -15.026 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.397 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.324 kcal (6) G-S(sol) free energy of system = (1) + (5) -27.423 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.67 seconds