Wall clock time and date at job start Tue Mar 9 2021 14:41:46 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50700 * 1 3 3 C 1.33328 * 125.95378 * 2 1 4 4 C 1.50698 * 122.70624 * 359.97438 * 3 2 1 5 5 O 1.42898 * 109.47284 * 30.00471 * 4 3 2 6 6 Si 1.86299 * 109.46980 * 150.00294 * 4 3 2 7 7 N 1.32115 * 114.57870 * 179.75306 * 3 2 1 8 8 C 1.29687 * 116.87047 * 0.47316 * 7 3 2 9 9 N 1.38609 * 124.95198 * 179.81735 * 8 7 3 10 10 C 1.46500 * 119.99891 * 179.71942 * 9 8 7 11 11 C 1.53002 * 109.46766 * 274.99617 * 10 9 8 12 12 C 1.52997 * 109.47092 * 180.02562 * 11 10 9 13 13 C 1.53006 * 109.47164 * 60.00174 * 12 11 10 14 14 C 1.52999 * 109.46623 * 299.99900 * 13 12 11 15 15 C 1.52997 * 109.46927 * 155.00146 * 10 9 8 16 16 C 1.52997 * 109.47457 * 59.99484 * 15 10 9 17 17 C 1.53002 * 109.46817 * 60.00169 * 16 15 10 18 18 O 1.42903 * 109.46923 * 179.97438 * 17 16 15 19 19 C 1.52997 * 109.47127 * 59.99836 * 13 12 11 20 20 C 1.52996 * 109.47346 * 299.99737 * 17 16 15 21 21 S 1.70963 * 110.09667 * 359.54627 * 8 7 3 22 22 H 1.08997 * 109.46822 * 179.97438 * 1 2 3 23 23 H 1.09003 * 109.47206 * 299.97710 * 1 2 3 24 24 H 1.09004 * 109.46969 * 59.97791 * 1 2 3 25 25 H 1.09005 * 109.47601 * 270.00107 * 4 3 2 26 26 H 0.96701 * 113.99989 * 179.97438 * 5 4 3 27 27 H 1.48504 * 110.00272 * 178.68253 * 6 4 3 28 28 H 1.48497 * 109.99870 * 299.99965 * 6 4 3 29 29 H 0.97001 * 119.99538 * 359.71783 * 9 8 7 30 30 H 1.09000 * 109.47381 * 34.99791 * 10 9 8 31 31 H 1.09002 * 109.47067 * 60.00243 * 11 10 9 32 32 H 1.09000 * 109.47140 * 300.00226 * 12 11 10 33 33 H 1.09001 * 109.47375 * 180.02562 * 12 11 10 34 34 H 1.08996 * 109.46884 * 180.02562 * 13 12 11 35 35 H 1.09000 * 109.47486 * 299.99829 * 14 13 12 36 36 H 1.09002 * 109.46716 * 179.97438 * 14 13 12 37 37 H 1.09001 * 109.46989 * 299.99155 * 15 10 9 38 38 H 1.08993 * 109.47194 * 299.99651 * 16 15 10 39 39 H 1.09002 * 109.46695 * 179.97438 * 16 15 10 40 40 H 0.96696 * 114.00096 * 179.97438 * 18 17 16 41 41 H 1.09002 * 109.47153 * 180.02562 * 19 13 12 42 42 H 1.09001 * 109.46832 * 60.00321 * 19 13 12 43 43 H 1.08992 * 109.47554 * 180.02562 * 20 17 16 44 44 H 1.09004 * 109.47108 * 300.00289 * 20 17 16 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2898 1.0793 0.0000 4 6 1.7414 2.4829 -0.0006 5 8 0.4811 2.5023 0.6727 6 14 2.9320 3.6151 0.8777 7 7 3.5850 0.8187 0.0052 8 6 3.9315 -0.4310 0.0000 9 7 5.2385 -0.8927 0.0005 10 6 5.5065 -2.3329 0.0005 11 6 5.4757 -2.8574 1.4375 12 6 5.7563 -4.3614 1.4376 13 6 7.1354 -4.6230 0.8287 14 6 7.1661 -4.0985 -0.6083 15 6 6.8854 -2.5950 -0.6086 16 6 7.9534 -1.8774 0.2192 17 6 7.9225 -2.4019 1.6562 18 8 8.9205 -1.7321 2.4292 19 6 8.2030 -3.9049 1.6566 20 6 6.5438 -2.1398 2.2653 21 16 2.5413 -1.4261 0.0001 22 1 -0.3633 -1.0277 -0.0005 23 1 -0.3634 0.5135 0.8902 24 1 -0.3633 0.5142 -0.8898 25 1 1.6095 2.8212 -1.0284 26 1 0.0689 3.3762 0.7108 27 1 2.4180 5.0082 0.8563 28 1 3.1204 3.1648 2.2802 29 1 5.9755 -0.2621 0.0008 30 1 4.7457 -2.8442 -0.5893 31 1 4.4934 -2.6706 1.8714 32 1 4.9957 -4.8729 0.8477 33 1 5.7339 -4.7351 2.4613 34 1 7.3350 -5.6945 0.8284 35 1 6.4055 -4.6101 -1.1982 36 1 8.1487 -4.2845 -1.0419 37 1 6.9073 -2.2214 -1.6323 38 1 7.7539 -0.8058 0.2191 39 1 8.9357 -2.0645 -0.2145 40 1 8.9579 -2.0150 3.3531 41 1 9.1854 -4.0909 1.2226 42 1 8.1810 -4.2786 2.6803 43 1 6.5219 -2.5130 3.2891 44 1 6.3443 -1.0682 2.2653 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV m_27_17849788_15704122.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 14:41:46 Heat of formation + Delta-G solvation = -41.564099 kcal Electronic energy + Delta-G solvation = -26810.898009 eV Core-core repulsion = 23241.328181 eV Total energy + Delta-G solvation = -3569.569828 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 323.134 amu Computer time = 0.81 seconds Orbital eigenvalues (eV) -42.89579 -40.80489 -38.11457 -37.54659 -36.41522 -33.93228 -33.34126 -32.15103 -31.43437 -29.17084 -27.11754 -26.68930 -25.41273 -24.31584 -22.93781 -22.50019 -22.21543 -20.44437 -19.31724 -18.66721 -18.12851 -17.94632 -17.21073 -16.59443 -16.29250 -16.00176 -15.78118 -15.55502 -15.51258 -15.26316 -15.00976 -14.73613 -14.47252 -14.01138 -13.99973 -13.81741 -13.68477 -13.59836 -13.47146 -13.24224 -13.11800 -12.97616 -12.38369 -12.21875 -12.13738 -12.05598 -12.03773 -11.69564 -11.57056 -11.44593 -11.04735 -10.75587 -10.55928 -10.50169 -10.35255 -9.88274 -8.49299 -4.63643 0.14497 0.27453 0.88494 1.41920 1.79125 1.89203 2.04177 2.20280 2.96455 3.10590 3.26262 3.33910 3.63116 3.73950 3.84090 3.90009 3.95432 3.99651 4.01153 4.07230 4.11873 4.15899 4.26360 4.38043 4.44385 4.46578 4.50544 4.55844 4.59700 4.74233 4.83125 4.84693 4.88152 4.89074 4.93339 4.97604 4.99559 5.03845 5.13445 5.18524 5.23309 5.29719 5.32833 5.43571 5.68955 6.35127 6.49890 6.65772 7.03389 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.057 4.057 2 C -0.232 4.232 3 C 0.105 3.895 4 C -0.041 4.041 5 O -0.535 6.535 6 Si 0.718 3.282 7 N -0.540 5.540 8 C 0.323 3.677 9 N -0.688 5.688 10 C 0.162 3.838 11 C -0.100 4.100 12 C -0.110 4.110 13 C -0.086 4.086 14 C -0.109 4.109 15 C -0.087 4.087 16 C -0.100 4.100 17 C 0.136 3.864 18 O -0.560 6.560 19 C -0.138 4.138 20 C -0.136 4.136 21 S 0.095 5.905 22 H 0.056 0.944 23 H 0.086 0.914 24 H 0.070 0.930 25 H 0.081 0.919 26 H 0.381 0.619 27 H -0.265 1.265 28 H -0.263 1.263 29 H 0.412 0.588 30 H 0.085 0.915 31 H 0.078 0.922 32 H 0.070 0.930 33 H 0.070 0.930 34 H 0.079 0.921 35 H 0.071 0.929 36 H 0.075 0.925 37 H 0.089 0.911 38 H 0.070 0.930 39 H 0.078 0.922 40 H 0.377 0.623 41 H 0.072 0.928 42 H 0.066 0.934 43 H 0.067 0.933 44 H 0.073 0.927 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.924 -3.217 -1.460 3.652 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.116 4.116 2 C -0.355 4.355 3 C -0.024 4.024 4 C -0.153 4.153 5 O -0.342 6.342 6 Si 0.618 3.382 7 N -0.267 5.267 8 C -0.048 4.048 9 N -0.329 5.329 10 C 0.056 3.944 11 C -0.120 4.120 12 C -0.148 4.148 13 C -0.104 4.104 14 C -0.147 4.147 15 C -0.106 4.106 16 C -0.138 4.138 17 C 0.096 3.904 18 O -0.366 6.366 19 C -0.176 4.176 20 C -0.174 4.174 21 S 0.344 5.656 22 H 0.075 0.925 23 H 0.105 0.895 24 H 0.089 0.911 25 H 0.099 0.901 26 H 0.230 0.770 27 H -0.191 1.191 28 H -0.188 1.188 29 H 0.252 0.748 30 H 0.103 0.897 31 H 0.097 0.903 32 H 0.088 0.912 33 H 0.089 0.911 34 H 0.098 0.902 35 H 0.090 0.910 36 H 0.093 0.907 37 H 0.107 0.893 38 H 0.088 0.912 39 H 0.096 0.904 40 H 0.225 0.775 41 H 0.091 0.909 42 H 0.085 0.915 43 H 0.086 0.914 44 H 0.092 0.908 Dipole moment (debyes) X Y Z Total from point charges 1.560 -3.867 -1.306 4.370 hybrid contribution -1.211 1.010 0.680 1.718 sum 0.349 -2.857 -0.626 2.946 Atomic orbital electron populations 1.20072 0.86588 1.01284 1.03636 1.25095 1.01312 0.92651 1.16441 1.18711 0.86561 0.94910 1.02257 1.23985 0.92063 0.97826 1.01441 1.86541 1.33228 1.34994 1.79423 0.93657 0.87407 0.74998 0.82115 1.65593 1.16763 1.16605 1.27707 1.23178 0.91815 0.91168 0.98651 1.44104 1.01648 1.06917 1.80212 1.21119 0.97897 0.79014 0.96333 1.21534 0.99638 0.95573 0.95277 1.21581 0.96871 0.94555 1.01769 1.21072 0.94695 1.00039 0.94638 1.21570 1.02799 0.93675 0.96644 1.21292 0.92613 0.96901 0.99795 1.21427 0.99585 0.99973 0.92812 1.21039 0.86864 0.90943 0.91585 1.86556 1.57642 1.66628 1.25736 1.22199 0.99494 0.95111 1.00794 1.22158 0.94472 1.01552 0.99178 1.83930 0.96639 1.10725 1.74342 0.92542 0.89539 0.91102 0.90105 0.77028 1.19073 1.18782 0.74786 0.89668 0.90334 0.91158 0.91104 0.90242 0.91004 0.90680 0.89298 0.91152 0.90370 0.77543 0.90884 0.91516 0.91441 0.90812 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.06 -0.10 8.91 36.01 0.32 0.22 16 2 C -0.23 -0.77 6.50 -36.02 -0.23 -1.00 16 3 C 0.10 0.40 5.96 -84.19 -0.50 -0.10 16 4 C -0.04 -0.07 2.93 36.00 0.11 0.03 16 5 O -0.53 -0.67 9.80 -35.23 -0.35 -1.01 16 6 Si 0.72 1.36 32.08 -169.99 -5.45 -4.09 16 7 N -0.54 -2.04 8.94 -11.36 -0.10 -2.14 16 8 C 0.32 0.75 8.22 -87.68 -0.72 0.03 16 9 N -0.69 -0.02 4.38 -55.79 -0.24 -0.26 16 10 C 0.16 -0.24 2.00 -67.93 -0.14 -0.37 16 11 C -0.10 0.13 2.89 -90.62 -0.26 -0.13 16 12 C -0.11 0.25 5.19 -26.73 -0.14 0.12 16 13 C -0.09 0.22 3.20 -90.62 -0.29 -0.07 16 14 C -0.11 0.30 5.19 -26.76 -0.14 0.16 16 15 C -0.09 0.19 2.88 -90.65 -0.26 -0.07 16 16 C -0.10 0.11 4.67 -26.73 -0.12 -0.01 16 17 C 0.14 -0.13 1.15 -90.67 -0.10 -0.23 16 18 O -0.56 -0.26 12.98 -35.23 -0.46 -0.72 16 19 C -0.14 0.25 4.81 -26.78 -0.13 0.12 16 20 C -0.14 0.11 4.66 -26.73 -0.12 -0.01 16 21 S 0.09 0.17 21.68 -107.50 -2.33 -2.16 16 22 H 0.06 0.05 8.14 -51.93 -0.42 -0.38 16 23 H 0.09 0.20 6.74 -51.93 -0.35 -0.15 16 24 H 0.07 0.09 8.14 -51.93 -0.42 -0.33 16 25 H 0.08 0.02 7.96 -51.93 -0.41 -0.40 16 26 H 0.38 -1.06 8.74 45.56 0.40 -0.66 16 27 H -0.26 -0.73 7.11 56.52 0.40 -0.33 16 28 H -0.26 -1.55 7.11 56.52 0.40 -1.15 16 29 H 0.41 -0.10 6.99 -40.82 -0.29 -0.39 16 30 H 0.09 -0.12 7.26 -51.93 -0.38 -0.50 16 31 H 0.08 -0.02 8.04 -51.93 -0.42 -0.44 16 32 H 0.07 -0.19 8.14 -51.93 -0.42 -0.61 16 33 H 0.07 -0.16 8.14 -51.93 -0.42 -0.58 16 34 H 0.08 -0.22 8.14 -51.93 -0.42 -0.65 16 35 H 0.07 -0.23 8.14 -51.93 -0.42 -0.65 16 36 H 0.07 -0.21 8.14 -51.93 -0.42 -0.63 16 37 H 0.09 -0.22 8.14 -51.93 -0.42 -0.64 16 38 H 0.07 -0.05 6.50 -51.93 -0.34 -0.38 16 39 H 0.08 -0.05 8.14 -51.93 -0.42 -0.48 16 40 H 0.38 -1.01 9.04 45.56 0.41 -0.60 16 41 H 0.07 -0.09 8.14 -51.93 -0.42 -0.51 16 42 H 0.07 -0.14 8.14 -51.93 -0.42 -0.56 16 43 H 0.07 -0.07 8.14 -51.93 -0.42 -0.50 16 44 H 0.07 0.06 7.60 -51.93 -0.39 -0.34 16 LS Contribution 339.81 15.07 5.12 5.12 Total: 0.00 -5.87 339.81 -12.59 -18.45 By element: Atomic # 1 Polarization: -5.81 SS G_CDS: -6.04 Total: -11.85 kcal Atomic # 6 Polarization: 1.41 SS G_CDS: -2.74 Total: -1.33 kcal Atomic # 7 Polarization: -2.06 SS G_CDS: -0.35 Total: -2.41 kcal Atomic # 8 Polarization: -0.93 SS G_CDS: -0.80 Total: -1.73 kcal Atomic # 14 Polarization: 1.36 SS G_CDS: -5.45 Total: -4.09 kcal Atomic # 16 Polarization: 0.17 SS G_CDS: -2.33 Total: -2.16 kcal Total LS contribution 5.12 Total: 5.12 kcal Total: -5.87 -12.59 -18.45 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_27_17849788_15704122.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -23.110 kcal (2) G-P(sol) polarization free energy of solvation -5.868 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -28.978 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.586 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.454 kcal (6) G-S(sol) free energy of system = (1) + (5) -41.564 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.81 seconds