Wall clock time and date at job start Tue Mar 9 2021 12:53:52 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42892 * 1 3 3 C 1.36000 * 117.00342 * 2 1 4 4 C 1.38522 * 120.06591 * 0.02562 * 3 2 1 5 5 C 1.38292 * 119.99808 * 179.97438 * 4 3 2 6 6 C 1.50696 * 119.92978 * 179.97438 * 5 4 3 7 7 C 1.38206 * 120.14292 * 359.97438 * 5 4 3 8 8 C 1.50699 * 119.92605 * 179.97438 * 7 5 4 9 9 O 1.42903 * 109.47152 * 75.00283 * 8 7 5 10 10 Si 1.86305 * 109.47184 * 194.99755 * 8 7 5 11 11 C 1.38290 * 120.15073 * 0.27230 * 7 5 4 12 12 C 1.38522 * 119.99548 * 359.45817 * 11 7 5 13 13 O 1.35992 * 120.07542 * 180.26910 * 12 11 7 14 14 C 1.42898 * 116.99833 * 0.27498 * 13 12 11 15 15 C 1.53007 * 109.47200 * 180.02562 * 14 13 12 16 16 H 1.08993 * 112.84673 * 45.32980 * 15 14 13 17 17 C 1.53783 * 113.61326 * 176.53006 * 15 14 13 18 18 C 1.53778 * 87.07965 * 139.98024 * 17 15 14 19 19 H 1.09000 * 113.61967 * 89.11426 * 18 17 15 20 20 O 1.42901 * 113.61330 * 219.93412 * 18 17 15 21 21 C 1.53780 * 113.61237 * 274.13343 * 15 14 13 22 22 H 1.08993 * 109.47341 * 300.00033 * 1 2 3 23 23 H 1.09003 * 109.47163 * 60.00255 * 1 2 3 24 24 H 1.09003 * 109.47276 * 179.97438 * 1 2 3 25 25 H 1.07994 * 120.00614 * 359.97438 * 4 3 2 26 26 H 1.08997 * 109.47294 * 270.02018 * 6 5 4 27 27 H 1.09003 * 109.46876 * 30.01899 * 6 5 4 28 28 H 1.08996 * 109.47204 * 150.01689 * 6 5 4 29 29 H 1.08997 * 109.47198 * 314.99961 * 8 7 5 30 30 H 0.96700 * 114.00311 * 180.02562 * 9 8 7 31 31 H 1.48499 * 109.99670 * 178.68093 * 10 8 7 32 32 H 1.48497 * 110.00233 * 300.00062 * 10 8 7 33 33 H 1.07993 * 120.00406 * 179.73033 * 11 7 5 34 34 H 1.08996 * 109.46900 * 299.99865 * 14 13 12 35 35 H 1.09001 * 109.47404 * 59.99610 * 14 13 12 36 36 H 1.08999 * 113.60970 * 254.53088 * 17 15 14 37 37 H 1.09001 * 113.61826 * 25.42534 * 17 15 14 38 38 H 0.96696 * 114.00458 * 180.02562 * 20 18 17 39 39 H 1.09007 * 113.61270 * 334.56955 * 21 15 14 40 40 H 1.08996 * 113.61649 * 105.46831 * 21 15 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4289 0.0000 0.0000 3 6 2.0464 1.2117 0.0000 4 6 1.2934 2.3744 0.0005 5 6 1.9228 3.6058 0.0011 6 6 1.1020 4.8697 0.0011 7 6 3.3028 3.6799 0.0016 8 6 3.9836 5.0243 0.0016 9 8 3.8872 5.6071 1.3029 10 14 5.7780 4.8119 -0.4522 11 6 4.0605 2.5230 -0.0041 12 6 3.4364 1.2864 0.0010 13 8 4.1799 0.1477 0.0010 14 6 5.6007 0.3007 0.0016 15 6 6.2622 -1.0790 0.0008 16 1 5.8087 -1.7653 -0.7142 17 6 7.7968 -1.0262 -0.0838 18 6 7.8141 -2.1789 0.9339 19 1 7.7850 -3.1671 0.4750 20 8 8.8399 -2.0555 1.9211 21 6 6.4364 -1.6794 1.4058 22 1 -0.3633 0.5138 0.8899 23 1 -0.3634 0.5138 -0.8900 24 1 -0.3634 -1.0277 -0.0005 25 1 0.2149 2.3193 0.0005 26 1 0.9042 5.1744 -1.0266 27 1 0.1577 4.6896 0.5148 28 1 1.6505 5.6590 0.5150 29 1 3.4997 5.6766 -0.7254 30 1 4.3046 6.4762 1.3765 31 1 6.4530 6.1341 -0.4868 32 1 6.4490 3.9246 0.5314 33 1 5.1387 2.5836 -0.0080 34 1 5.9072 0.8507 -0.8880 35 1 5.9066 0.8502 0.8919 36 1 8.1897 -1.3019 -1.0625 37 1 8.2237 -0.0992 0.2989 38 1 8.8561 -2.7777 2.5639 39 1 6.4906 -0.9312 2.1967 40 1 5.7328 -2.4815 1.6282 There are 52 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 52 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV m_34_14060148_11354860.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:53:52 Heat of formation + Delta-G solvation = -100.378399 kcal Electronic energy + Delta-G solvation = -22530.451577 eV Core-core repulsion = 19085.731698 eV Total energy + Delta-G solvation = -3444.719878 eV No. of doubly occupied orbitals = 52 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 281.139 amu Computer time = 0.47 seconds Orbital eigenvalues (eV) -41.69771 -40.48522 -39.23035 -38.91340 -37.14115 -36.00304 -32.92544 -32.09792 -29.60419 -28.56108 -27.64545 -26.74593 -25.63417 -24.00719 -22.45683 -21.85421 -20.57509 -19.24157 -18.60945 -18.54002 -17.84719 -17.75796 -17.08258 -16.50255 -16.14418 -16.01534 -15.92085 -15.51725 -15.31378 -14.82113 -14.57344 -14.40973 -14.09911 -13.93694 -13.47017 -13.41364 -13.15693 -13.12028 -12.83697 -12.64876 -12.43487 -12.25091 -12.13750 -11.98566 -11.78951 -11.70543 -11.51892 -11.19525 -10.75306 -10.46636 -9.63961 -8.62528 -5.01245 0.26398 0.42792 1.25013 1.53841 1.89654 2.17093 2.34207 2.59558 3.22966 3.35505 3.46776 3.55063 3.73911 3.77956 3.83582 3.89770 3.97170 4.08743 4.21733 4.23983 4.27259 4.27936 4.29627 4.40913 4.47669 4.56083 4.62185 4.66532 4.75820 4.75943 4.76256 4.80294 4.96767 5.00389 5.10836 5.21068 5.25266 5.35980 5.62767 5.71426 6.14899 6.43121 6.66285 6.69476 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.025 3.975 2 O -0.305 6.305 3 C 0.111 3.889 4 C -0.174 4.174 5 C -0.055 4.055 6 C -0.117 4.117 7 C -0.072 4.072 8 C -0.068 4.068 9 O -0.532 6.532 10 Si 0.677 3.323 11 C -0.167 4.167 12 C 0.103 3.897 13 O -0.299 6.299 14 C 0.067 3.933 15 C -0.107 4.107 16 H 0.107 0.893 17 C -0.120 4.120 18 C 0.076 3.924 19 H 0.085 0.915 20 O -0.560 6.560 21 C -0.164 4.164 22 H 0.055 0.945 23 H 0.056 0.944 24 H 0.102 0.898 25 H 0.138 0.862 26 H 0.071 0.929 27 H 0.065 0.935 28 H 0.077 0.923 29 H 0.077 0.923 30 H 0.378 0.622 31 H -0.258 1.258 32 H -0.254 1.254 33 H 0.138 0.862 34 H 0.067 0.933 35 H 0.062 0.938 36 H 0.081 0.919 37 H 0.093 0.907 38 H 0.380 0.620 39 H 0.090 0.910 40 H 0.074 0.926 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.269 0.266 -2.776 3.064 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.070 4.070 2 O -0.218 6.218 3 C 0.065 3.935 4 C -0.193 4.193 5 C -0.055 4.055 6 C -0.174 4.174 7 C -0.073 4.073 8 C -0.178 4.178 9 O -0.340 6.340 10 Si 0.578 3.422 11 C -0.186 4.186 12 C 0.057 3.943 13 O -0.213 6.213 14 C -0.008 4.008 15 C -0.126 4.126 16 H 0.125 0.875 17 C -0.158 4.158 18 C 0.017 3.983 19 H 0.103 0.897 20 O -0.366 6.366 21 C -0.201 4.201 22 H 0.074 0.926 23 H 0.075 0.925 24 H 0.120 0.880 25 H 0.156 0.844 26 H 0.090 0.910 27 H 0.084 0.916 28 H 0.096 0.904 29 H 0.095 0.905 30 H 0.226 0.774 31 H -0.183 1.183 32 H -0.179 1.179 33 H 0.155 0.845 34 H 0.085 0.915 35 H 0.081 0.919 36 H 0.100 0.900 37 H 0.111 0.889 38 H 0.228 0.772 39 H 0.108 0.892 40 H 0.093 0.907 Dipole moment (debyes) X Y Z Total from point charges -0.598 -0.035 -2.745 2.809 hybrid contribution -0.527 0.688 1.115 1.412 sum -1.125 0.653 -1.630 2.086 Atomic orbital electron populations 1.23105 0.78309 1.04239 1.01332 1.86189 1.21198 1.25677 1.88721 1.18254 0.89060 0.85301 1.00907 1.20972 1.00050 0.90805 1.07469 1.19431 0.92792 0.94785 0.98518 1.20840 0.99260 0.94885 1.02374 1.18705 0.92792 0.92435 1.03351 1.24653 1.11008 0.94252 0.87924 1.86625 1.79856 1.37671 1.29810 0.95090 0.74811 0.82519 0.89730 1.20951 1.00126 0.90946 1.06542 1.18012 0.88164 0.85791 1.02331 1.86170 1.18305 1.27949 1.88865 1.22850 0.78452 0.97936 1.01558 1.22304 0.95106 0.96029 0.99132 0.87478 1.23069 0.93959 0.99493 0.99259 1.23334 0.86731 0.98260 0.89999 0.89731 1.86520 1.54796 1.51551 1.43744 1.23794 0.97752 1.01644 0.96943 0.92628 0.92542 0.88003 0.84431 0.91029 0.91554 0.90414 0.90548 0.77418 1.18315 1.17931 0.84477 0.91494 0.91944 0.90001 0.88876 0.77238 0.89186 0.90692 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.01 9.81 101.05 0.99 0.98 16 2 O -0.30 -1.15 10.28 -34.22 -0.35 -1.50 16 3 C 0.11 0.42 6.70 -39.12 -0.26 0.16 16 4 C -0.17 -0.37 8.69 -39.46 -0.34 -0.72 16 5 C -0.05 -0.12 5.88 -104.62 -0.62 -0.73 16 6 C -0.12 -0.02 9.32 36.00 0.34 0.32 16 7 C -0.07 -0.17 5.30 -104.61 -0.55 -0.73 16 8 C -0.07 -0.03 1.87 36.01 0.07 0.03 16 9 O -0.53 -0.72 11.89 -35.23 -0.42 -1.14 16 10 Si 0.68 -0.20 30.18 -169.99 -5.13 -5.33 16 11 C -0.17 -0.46 7.65 -39.46 -0.30 -0.76 16 12 C 0.10 0.41 6.70 -39.12 -0.26 0.15 16 13 O -0.30 -1.19 9.92 -34.19 -0.34 -1.53 16 14 C 0.07 0.08 4.57 37.16 0.17 0.25 16 15 C -0.11 -0.02 4.00 -89.80 -0.36 -0.38 16 16 H 0.11 -0.01 8.14 -51.93 -0.42 -0.44 16 17 C -0.12 0.03 7.47 -25.92 -0.19 -0.16 16 18 C 0.08 0.00 5.21 -25.83 -0.13 -0.13 16 19 H 0.08 -0.12 8.14 -51.93 -0.42 -0.54 16 20 O -0.56 -0.70 13.68 -35.23 -0.48 -1.19 16 21 C -0.16 -0.08 7.48 -25.83 -0.19 -0.27 16 22 H 0.06 -0.07 7.66 -51.93 -0.40 -0.47 16 23 H 0.06 -0.09 7.66 -51.93 -0.40 -0.49 16 24 H 0.10 -0.20 8.14 -51.93 -0.42 -0.62 16 25 H 0.14 -0.01 6.30 -52.49 -0.33 -0.34 16 26 H 0.07 -0.08 8.14 -51.93 -0.42 -0.50 16 27 H 0.07 -0.03 8.08 -51.93 -0.42 -0.45 16 28 H 0.08 0.04 6.19 -51.93 -0.32 -0.28 16 29 H 0.08 -0.10 7.38 -51.93 -0.38 -0.49 16 30 H 0.38 -1.01 8.74 45.56 0.40 -0.61 16 31 H -0.26 -0.35 7.11 56.52 0.40 0.05 16 32 H -0.25 -0.62 6.75 56.52 0.38 -0.24 16 33 H 0.14 0.19 3.13 -52.49 -0.16 0.03 16 34 H 0.07 -0.03 7.65 -51.93 -0.40 -0.43 16 35 H 0.06 0.08 7.41 -51.93 -0.38 -0.30 16 36 H 0.08 -0.11 8.14 -51.93 -0.42 -0.53 16 37 H 0.09 0.03 8.10 -51.93 -0.42 -0.39 16 38 H 0.38 -1.03 9.12 45.56 0.42 -0.62 16 39 H 0.09 0.12 7.92 -51.92 -0.41 -0.29 16 40 H 0.07 0.02 8.14 -51.93 -0.42 -0.40 16 LS Contribution 324.65 15.07 4.89 4.89 Total: 0.00 -7.68 324.65 -8.45 -16.13 By element: Atomic # 1 Polarization: -3.38 SS G_CDS: -4.97 Total: -8.35 kcal Atomic # 6 Polarization: -0.33 SS G_CDS: -1.65 Total: -1.98 kcal Atomic # 8 Polarization: -3.77 SS G_CDS: -1.59 Total: -5.36 kcal Atomic # 14 Polarization: -0.20 SS G_CDS: -5.13 Total: -5.33 kcal Total LS contribution 4.89 Total: 4.89 kcal Total: -7.68 -8.45 -16.13 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_34_14060148_11354860.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -84.248 kcal (2) G-P(sol) polarization free energy of solvation -7.677 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -91.925 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.453 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.130 kcal (6) G-S(sol) free energy of system = (1) + (5) -100.378 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.47 seconds