Wall clock time and date at job start Tue Mar 9 2021 12:59:33 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42905 * 1 3 3 C 1.35993 * 117.00147 * 2 1 4 4 C 1.38525 * 120.07120 * 0.02562 * 3 2 1 5 5 C 1.38279 * 119.99743 * 179.97438 * 4 3 2 6 6 C 1.50699 * 119.92895 * 180.02562 * 5 4 3 7 7 C 1.38216 * 120.14970 * 359.97438 * 5 4 3 8 8 C 1.50699 * 119.92869 * 180.02562 * 7 5 4 9 9 O 1.42897 * 109.47260 * 74.99748 * 8 7 5 10 10 Si 1.86298 * 109.46721 * 195.00029 * 8 7 5 11 11 C 1.38292 * 120.14347 * 359.76488 * 7 5 4 12 12 C 1.38525 * 119.99469 * 0.51369 * 11 7 5 13 13 O 1.35996 * 120.06771 * 179.74325 * 12 11 7 14 14 C 1.42900 * 117.00008 * 359.72304 * 13 12 11 15 15 C 1.53007 * 109.46683 * 180.02562 * 14 13 12 16 16 H 1.08994 * 112.84922 * 43.80068 * 15 14 13 17 17 C 1.53781 * 113.61158 * 174.99973 * 15 14 13 18 18 C 1.53785 * 87.08139 * 89.11562 * 17 15 14 19 19 O 1.42903 * 113.61187 * 270.88311 * 18 17 15 20 20 C 1.42900 * 114.00166 * 294.70089 * 19 18 17 21 21 C 1.52997 * 113.61319 * 139.98359 * 18 17 15 22 22 F 1.39893 * 109.47343 * 54.78057 * 21 18 17 23 23 F 1.39903 * 109.47069 * 174.78014 * 21 18 17 24 24 F 1.39899 * 109.47071 * 294.77622 * 21 18 17 25 25 C 1.53779 * 87.08048 * 25.43014 * 18 17 15 26 26 H 1.09002 * 109.47155 * 180.02562 * 1 2 3 27 27 H 1.08998 * 109.47103 * 300.00235 * 1 2 3 28 28 H 1.09004 * 109.47113 * 60.00040 * 1 2 3 29 29 H 1.07996 * 120.00022 * 359.96026 * 4 3 2 30 30 H 1.08998 * 109.47770 * 89.99595 * 6 5 4 31 31 H 1.09000 * 109.47124 * 210.00158 * 6 5 4 32 32 H 1.09008 * 109.46875 * 329.99822 * 6 5 4 33 33 H 1.09002 * 109.46777 * 314.99768 * 8 7 5 34 34 H 0.96700 * 113.99943 * 59.99988 * 9 8 7 35 35 H 1.48501 * 110.00375 * 58.67817 * 10 8 7 36 36 H 1.48510 * 109.99794 * 179.97438 * 10 8 7 37 37 H 1.07994 * 120.00178 * 180.25230 * 11 7 5 38 38 H 1.09000 * 109.46738 * 299.99885 * 14 13 12 39 39 H 1.08998 * 109.47045 * 60.00560 * 14 13 12 40 40 H 1.08997 * 113.61637 * 203.66027 * 17 15 14 41 41 H 1.09006 * 113.61370 * 334.48816 * 17 15 14 42 42 H 1.09001 * 109.47396 * 297.19837 * 20 19 18 43 43 H 1.08996 * 109.47300 * 57.19615 * 20 19 18 44 44 H 1.08995 * 109.46996 * 177.19812 * 20 19 18 45 45 H 1.08996 * 113.61610 * 220.01720 * 25 18 17 46 46 H 1.09003 * 113.61047 * 89.11854 * 25 18 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0465 1.2117 0.0000 4 6 1.2935 2.3744 0.0005 5 6 1.9229 3.6057 0.0011 6 6 1.1022 4.8696 0.0022 7 6 3.3031 3.6798 0.0016 8 6 3.9838 5.0243 0.0028 9 8 3.8874 5.6059 1.3045 10 14 5.7781 4.8121 -0.4514 11 6 4.0606 2.5229 0.0065 12 6 3.4364 1.2863 0.0002 13 8 4.1800 0.1476 -0.0003 14 6 5.6008 0.3006 -0.0002 15 6 6.2622 -1.0791 -0.0014 16 1 5.7915 -1.7735 -0.6972 17 6 7.7942 -1.0276 -0.1241 18 6 7.8361 -0.9500 1.4112 19 8 7.7824 0.3848 1.9185 20 6 8.9193 1.1816 1.5798 21 6 8.9590 -1.7800 2.0364 22 9 10.1839 -1.4067 1.4732 23 9 8.9925 -1.5547 3.4167 24 9 8.7274 -3.1377 1.7911 25 6 6.4732 -1.6623 1.4058 26 1 -0.3633 -1.0277 0.0005 27 1 -0.3633 0.5139 0.8899 28 1 -0.3633 0.5138 -0.8900 29 1 0.2149 2.3193 0.0003 30 1 0.9047 5.1737 1.0301 31 1 1.6506 5.6593 -0.5113 32 1 0.1576 4.6899 -0.5114 33 1 3.4998 5.6771 -0.7237 34 1 4.2979 5.0776 2.0027 35 1 5.8919 4.1788 -1.7897 36 1 6.4606 6.1310 -0.4544 37 1 5.1389 2.5835 0.0110 38 1 5.9070 0.8507 -0.8899 39 1 5.9069 0.8499 0.8901 40 1 8.2310 -1.9413 -0.5271 41 1 8.1627 -0.1285 -0.6182 42 1 9.8136 0.7468 2.0261 43 1 9.0320 1.2117 0.4961 44 1 8.7794 2.1938 1.9589 45 1 5.7752 -1.2751 2.1481 46 1 6.5487 -2.7496 1.4211 There are 67 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 67 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_34_14060148_17321602.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:59:33 Heat of formation + Delta-G solvation = -232.437093 kcal Electronic energy + Delta-G solvation = -34898.915452 eV Core-core repulsion = 29729.031914 eV Total energy + Delta-G solvation = -5169.883538 eV No. of doubly occupied orbitals = 67 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 363.142 amu Computer time = 0.99 seconds Orbital eigenvalues (eV) -51.20689 -48.74449 -48.67527 -41.90606 -41.25960 -39.39693 -39.08931 -37.12822 -36.82748 -33.03698 -32.07455 -30.51443 -28.78886 -28.10586 -27.70977 -27.26326 -26.67678 -25.62090 -23.70649 -22.68539 -22.04621 -20.51892 -19.85064 -19.51126 -19.35913 -19.15799 -18.29630 -17.89854 -17.36033 -17.18349 -17.01729 -16.41625 -16.31575 -16.22526 -15.84735 -15.68329 -15.60026 -15.56824 -15.51871 -15.32410 -15.12463 -14.90191 -14.85304 -14.65881 -14.47079 -14.24185 -14.14470 -13.96293 -13.70841 -13.48162 -13.14278 -13.07966 -12.93834 -12.72369 -12.57779 -12.33174 -12.23987 -12.17524 -11.93988 -11.87078 -11.68875 -11.54816 -11.52592 -10.72453 -10.40705 -9.73465 -8.75490 -5.07333 0.15710 0.30249 1.28494 1.58715 1.60559 1.92862 2.07101 2.17620 2.31219 2.54098 2.61996 2.68448 2.95353 3.36878 3.43510 3.49915 3.55089 3.61553 3.74976 3.81135 3.92071 4.11374 4.23721 4.31539 4.34473 4.34760 4.37560 4.38409 4.43987 4.47060 4.53116 4.56992 4.57710 4.70463 4.73489 4.76140 4.77068 4.82190 4.87739 4.92444 4.94162 5.06088 5.10764 5.19950 5.54771 5.64410 5.80069 6.08893 6.57824 6.76857 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.018 3.982 2 O -0.328 6.328 3 C 0.091 3.909 4 C -0.177 4.177 5 C -0.066 4.066 6 C -0.110 4.110 7 C -0.125 4.125 8 C -0.067 4.067 9 O -0.549 6.549 10 Si 0.754 3.246 11 C -0.160 4.160 12 C 0.088 3.912 13 O -0.316 6.316 14 C 0.059 3.941 15 C -0.094 4.094 16 H 0.108 0.892 17 C -0.134 4.134 18 C 0.039 3.961 19 O -0.341 6.341 20 C -0.002 4.002 21 C 0.432 3.568 22 F -0.184 7.184 23 F -0.188 7.188 24 F -0.179 7.179 25 C -0.114 4.114 26 H 0.114 0.886 27 H 0.064 0.936 28 H 0.064 0.936 29 H 0.152 0.848 30 H 0.076 0.924 31 H 0.068 0.932 32 H 0.073 0.927 33 H 0.110 0.890 34 H 0.393 0.607 35 H -0.282 1.282 36 H -0.290 1.290 37 H 0.157 0.843 38 H 0.077 0.923 39 H 0.091 0.909 40 H 0.121 0.879 41 H 0.111 0.889 42 H 0.041 0.959 43 H 0.072 0.928 44 H 0.123 0.877 45 H 0.090 0.910 46 H 0.120 0.880 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.547 0.425 -1.332 1.501 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.076 4.076 2 O -0.242 6.242 3 C 0.045 3.955 4 C -0.195 4.195 5 C -0.066 4.066 6 C -0.166 4.166 7 C -0.125 4.125 8 C -0.177 4.177 9 O -0.357 6.357 10 Si 0.659 3.341 11 C -0.178 4.178 12 C 0.042 3.958 13 O -0.231 6.231 14 C -0.015 4.015 15 C -0.113 4.113 16 H 0.126 0.874 17 C -0.171 4.171 18 C -0.004 4.004 19 O -0.259 6.259 20 C -0.097 4.097 21 C 0.377 3.623 22 F -0.166 7.166 23 F -0.169 7.169 24 F -0.160 7.160 25 C -0.151 4.151 26 H 0.132 0.868 27 H 0.083 0.917 28 H 0.082 0.918 29 H 0.170 0.830 30 H 0.095 0.905 31 H 0.086 0.914 32 H 0.092 0.908 33 H 0.128 0.872 34 H 0.243 0.757 35 H -0.208 1.208 36 H -0.218 1.218 37 H 0.174 0.826 38 H 0.095 0.905 39 H 0.108 0.892 40 H 0.139 0.861 41 H 0.129 0.871 42 H 0.060 0.940 43 H 0.091 0.909 44 H 0.141 0.859 45 H 0.108 0.892 46 H 0.139 0.861 Dipole moment (debyes) X Y Z Total from point charges -0.323 0.746 -2.090 2.243 hybrid contribution -0.142 0.027 -0.025 0.147 sum -0.465 0.773 -2.115 2.300 Atomic orbital electron populations 1.23323 0.76700 1.05421 1.02150 1.86150 1.23027 1.26116 1.88900 1.18547 0.89612 0.85678 1.01625 1.21177 1.00884 0.90518 1.06952 1.19685 0.93366 0.95140 0.98425 1.20793 0.99078 0.93714 1.03033 1.19974 0.93680 0.95029 1.03865 1.25071 1.10877 0.92423 0.89309 1.86472 1.82761 1.49955 1.16527 0.94172 0.75659 0.81028 0.83208 1.20973 1.00221 0.90272 1.06381 1.18262 0.88365 0.86331 1.02823 1.86114 1.19556 1.28387 1.89035 1.22981 0.77259 0.97790 1.03475 1.22008 0.95023 0.96400 0.97823 0.87408 1.23637 0.95566 1.06728 0.91218 1.24127 0.94195 0.85549 0.96495 1.88078 1.43065 1.18852 1.75911 1.23391 0.87488 0.96719 1.02143 1.21553 0.84212 0.79671 0.76818 1.93180 1.47538 1.91003 1.84831 1.93188 1.96708 1.94421 1.32611 1.93168 1.94349 1.34472 1.94010 1.23304 0.91788 1.01412 0.98638 0.86758 0.91706 0.91765 0.83041 0.90531 0.91358 0.90799 0.87249 0.75713 1.20846 1.21778 0.82605 0.90457 0.89151 0.86099 0.87079 0.94025 0.90920 0.85874 0.89168 0.86135 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.03 9.81 113.37 1.11 1.08 16 2 O -0.33 -2.14 10.28 -79.63 -0.82 -2.96 16 3 C 0.09 0.55 6.70 22.57 0.15 0.70 16 4 C -0.18 -0.48 8.69 22.35 0.19 -0.29 16 5 C -0.07 -0.16 5.88 -19.86 -0.12 -0.27 16 6 C -0.11 0.03 9.53 71.24 0.68 0.71 16 7 C -0.12 -0.18 5.26 -19.86 -0.10 -0.28 16 8 C -0.07 0.03 2.04 71.24 0.15 0.17 16 9 O -0.55 0.17 12.80 -148.98 -1.91 -1.73 16 10 Si 0.75 -1.86 29.91 68.60 2.05 0.19 16 11 C -0.16 -0.15 7.65 22.35 0.17 0.02 16 12 C 0.09 0.45 6.70 22.57 0.15 0.60 16 13 O -0.32 -1.52 9.92 -79.67 -0.79 -2.31 16 14 C 0.06 -0.13 4.32 71.98 0.31 0.18 16 15 C -0.09 0.39 4.20 -10.27 -0.04 0.34 16 16 H 0.11 -0.45 8.14 -2.39 -0.02 -0.47 16 17 C -0.13 0.88 6.51 31.12 0.20 1.08 16 18 C 0.04 -0.09 0.85 -10.27 -0.01 -0.10 16 19 O -0.34 0.79 8.35 -148.98 -1.24 -0.46 16 20 C 0.00 0.01 10.34 113.37 1.17 1.19 16 21 C 0.43 0.67 2.51 71.98 0.18 0.85 16 22 F -0.18 -0.32 15.38 44.97 0.69 0.37 16 23 F -0.19 -1.04 17.10 44.97 0.77 -0.27 16 24 F -0.18 -0.39 15.82 44.97 0.71 0.32 16 25 C -0.11 0.29 6.89 31.12 0.21 0.50 16 26 H 0.11 -0.55 8.14 -2.39 -0.02 -0.57 16 27 H 0.06 -0.25 7.66 -2.39 -0.02 -0.26 16 28 H 0.06 -0.25 7.66 -2.38 -0.02 -0.26 16 29 H 0.15 -0.22 6.30 -2.91 -0.02 -0.24 16 30 H 0.08 -0.01 8.14 -2.39 -0.02 -0.03 16 31 H 0.07 0.00 6.22 -2.39 -0.01 -0.02 16 32 H 0.07 -0.18 8.08 -2.38 -0.02 -0.20 16 33 H 0.11 0.04 6.48 -2.39 -0.02 0.02 16 34 H 0.39 -2.98 8.70 -74.06 -0.64 -3.63 16 35 H -0.28 -0.62 7.11 99.48 0.71 0.09 16 36 H -0.29 -1.22 7.11 99.48 0.71 -0.51 16 37 H 0.16 -0.68 3.37 -2.91 -0.01 -0.69 16 38 H 0.08 -0.39 7.68 -2.39 -0.02 -0.41 16 39 H 0.09 -0.31 5.63 -2.39 -0.01 -0.32 16 40 H 0.12 -0.97 8.06 -2.39 -0.02 -0.99 16 41 H 0.11 -1.07 6.65 -2.38 -0.02 -1.09 16 42 H 0.04 -0.16 6.59 -2.39 -0.02 -0.17 16 43 H 0.07 -0.73 6.61 -2.39 -0.02 -0.74 16 44 H 0.12 -1.30 8.14 -2.39 -0.02 -1.32 16 45 H 0.09 -0.04 8.10 -2.39 -0.02 -0.06 16 46 H 0.12 -0.46 7.01 -2.39 -0.02 -0.48 16 Total: 0.00 -17.04 375.02 4.32 -12.72 By element: Atomic # 1 Polarization: -12.80 SS G_CDS: 0.44 Total: -12.36 kcal Atomic # 6 Polarization: 2.07 SS G_CDS: 4.41 Total: 6.48 kcal Atomic # 8 Polarization: -2.70 SS G_CDS: -4.76 Total: -7.46 kcal Atomic # 9 Polarization: -1.76 SS G_CDS: 2.17 Total: 0.42 kcal Atomic # 14 Polarization: -1.86 SS G_CDS: 2.05 Total: 0.19 kcal Total: -17.04 4.32 -12.72 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_34_14060148_17321602.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -219.713 kcal (2) G-P(sol) polarization free energy of solvation -17.042 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -236.756 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 4.319 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -12.724 kcal (6) G-S(sol) free energy of system = (1) + (5) -232.437 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.99 seconds