Wall clock time and date at job start Tue Mar 9 2021 13:09:40 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53006 * 1 3 3 O 1.45200 * 109.47003 * 2 1 4 4 C 1.34222 * 117.00094 * 180.02562 * 3 2 1 5 5 O 1.20821 * 120.00135 * 359.97438 * 4 3 2 6 6 C 1.50703 * 119.99985 * 179.97438 * 4 3 2 7 7 H 1.09005 * 112.84876 * 48.80391 * 6 4 3 8 8 C 1.53785 * 113.61305 * 179.97438 * 6 4 3 9 9 C 1.53790 * 87.07770 * 139.98344 * 8 6 4 10 10 F 1.39900 * 113.61373 * 89.20192 * 9 8 6 11 11 C 1.52997 * 113.61304 * 220.01845 * 9 8 6 12 12 S 1.81395 * 109.47317 * 179.97438 * 11 9 8 13 13 O 1.42103 * 110.54355 * 291.62947 * 12 11 9 14 14 O 1.42107 * 110.53850 * 68.37616 * 12 11 9 15 15 O 1.52193 * 104.45366 * 180.02562 * 12 11 9 16 16 C 1.35994 * 113.99839 * 75.00121 * 15 12 11 17 17 C 1.39150 * 120.07362 * 90.00573 * 16 15 12 18 18 O 1.35998 * 120.07193 * 359.97438 * 17 16 15 19 19 C 1.42904 * 116.99859 * 180.02562 * 18 17 16 20 20 C 1.38567 * 119.85304 * 180.02562 * 17 16 15 21 21 C 1.38241 * 120.00271 * 359.97438 * 20 17 16 22 22 C 1.50692 * 119.92705 * 179.97438 * 21 20 17 23 23 C 1.38249 * 120.14346 * 359.97438 * 21 20 17 24 24 C 1.50705 * 119.92806 * 180.02562 * 23 21 20 25 25 O 1.42900 * 109.46776 * 284.99531 * 24 23 21 26 26 Si 1.86291 * 109.47414 * 164.99692 * 24 23 21 27 27 C 1.38249 * 120.14875 * 359.75767 * 23 21 20 28 28 C 1.53779 * 87.08148 * 334.56778 * 9 8 6 29 29 H 1.09000 * 109.47050 * 299.99913 * 1 2 3 30 30 H 1.09001 * 109.46801 * 60.00026 * 1 2 3 31 31 H 1.09001 * 109.46998 * 179.97438 * 1 2 3 32 32 H 1.08993 * 109.46955 * 120.00258 * 2 1 3 33 33 H 1.09000 * 109.47050 * 240.00087 * 2 1 3 34 34 H 1.08999 * 113.61690 * 254.52984 * 8 6 4 35 35 H 1.08995 * 113.61312 * 25.35177 * 8 6 4 36 36 H 1.08997 * 109.47273 * 300.00145 * 11 9 8 37 37 H 1.09008 * 109.47111 * 60.00110 * 11 9 8 38 38 H 1.08993 * 109.47089 * 180.02562 * 19 18 17 39 39 H 1.08999 * 109.46978 * 300.00295 * 19 18 17 40 40 H 1.09004 * 109.46903 * 59.99989 * 19 18 17 41 41 H 1.08004 * 119.99779 * 179.97438 * 20 17 16 42 42 H 1.09000 * 109.47171 * 90.00816 * 22 21 20 43 43 H 1.09003 * 109.47140 * 210.00481 * 22 21 20 44 44 H 1.09001 * 109.47805 * 330.00334 * 22 21 20 45 45 H 1.08998 * 109.46794 * 44.99339 * 24 23 21 46 46 H 0.96701 * 114.00359 * 299.99760 * 25 24 23 47 47 H 1.48499 * 110.00375 * 58.67848 * 26 24 23 48 48 H 1.48495 * 110.00107 * 179.97438 * 26 24 23 49 49 H 1.07998 * 120.00139 * 180.26090 * 27 23 21 50 50 H 1.08999 * 113.61440 * 270.88730 * 28 9 8 51 51 H 1.09003 * 113.61525 * 139.97962 * 28 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5301 0.0000 0.0000 3 8 2.0140 1.3690 0.0000 4 6 3.3447 1.5449 -0.0005 5 8 4.0807 0.5868 -0.0005 6 6 3.9206 2.9375 -0.0012 7 1 3.4713 3.5817 0.7547 8 6 5.4582 2.9682 -0.0011 9 6 5.3564 4.1422 -0.9892 10 9 5.2849 5.3934 -0.3675 11 6 6.3985 4.0935 -2.1083 12 16 6.1771 5.5225 -3.2034 13 8 4.9595 5.4118 -3.9277 14 8 6.5221 6.7252 -2.5297 15 8 7.2588 5.3611 -4.2619 16 6 6.9930 4.3952 -5.1815 17 6 6.3002 4.7126 -6.3458 18 8 5.8869 5.9893 -6.5663 19 6 5.1808 6.2417 -7.7828 20 6 6.0314 3.7246 -7.2795 21 6 6.4517 2.4272 -7.0536 22 6 6.1579 1.3540 -8.0699 23 6 7.1409 2.1121 -5.8973 24 6 7.5974 0.6962 -5.6562 25 8 6.4766 -0.1087 -5.2847 26 14 8.8587 0.6752 -4.2854 27 6 7.4172 3.0941 -4.9642 28 6 3.9862 3.5764 -1.3984 29 1 -0.3633 0.5138 0.8900 30 1 -0.3633 0.5138 -0.8900 31 1 -0.3633 -1.0277 -0.0005 32 1 1.8933 -0.5138 0.8899 33 1 1.8934 -0.5138 -0.8900 34 1 5.8894 3.2437 0.9613 35 1 5.9127 2.0744 -0.4283 36 1 7.3984 4.1188 -1.6750 37 1 6.2740 3.1745 -2.6811 38 1 4.9100 7.2962 -7.8336 39 1 5.8168 5.9890 -8.6312 40 1 4.2775 5.6323 -7.8117 41 1 5.4935 3.9683 -8.1838 42 1 6.9757 1.3005 -8.7885 43 1 6.0548 0.3936 -7.5647 44 1 5.2308 1.5915 -8.5915 45 1 8.0442 0.2985 -6.5674 46 1 6.0289 0.1876 -4.4804 47 1 8.2714 1.2446 -3.0460 48 1 9.3163 -0.7156 -4.0376 49 1 7.9595 2.8461 -4.0638 50 1 4.0384 2.8495 -2.2089 51 1 3.2291 4.3429 -1.5640 There are 75 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 75 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV m_40_14060150_16464788.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:09:40 Heat of formation + Delta-G solvation = -237.582858 kcal Electronic energy + Delta-G solvation = -41535.459593 eV Core-core repulsion = 36025.376639 eV Total energy + Delta-G solvation = -5510.082953 eV No. of doubly occupied orbitals = 75 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 419.132 amu Computer time = 2.43 seconds Orbital eigenvalues (eV) -49.20023 -42.60455 -41.84794 -40.37951 -39.63295 -39.41833 -38.20603 -37.50188 -37.41526 -37.08193 -33.60783 -32.90681 -32.36451 -31.98465 -29.06194 -28.28146 -27.44967 -27.00904 -26.22321 -24.19024 -23.83767 -23.12206 -22.32115 -21.43715 -20.96111 -19.72058 -19.24043 -19.09341 -18.79252 -18.52502 -18.07079 -17.80327 -17.65487 -17.45804 -17.18314 -16.83295 -16.58655 -16.40517 -16.29548 -16.21674 -15.87270 -15.82390 -15.40184 -15.36382 -14.73739 -14.70470 -14.66175 -14.58587 -14.40571 -14.13630 -13.93831 -13.84301 -13.81722 -13.76164 -13.28007 -13.20489 -13.16317 -13.15462 -13.08673 -13.03462 -12.98192 -12.95105 -12.62624 -12.53240 -12.45942 -12.33068 -12.10381 -11.94725 -11.89024 -11.60578 -11.54724 -11.41027 -10.79626 -10.22131 -9.46857 -5.14174 -1.16271 -0.24019 -0.09563 0.96816 1.00864 1.06388 1.33280 1.49464 1.77890 1.92985 2.08204 2.42304 2.51998 2.64858 2.73703 2.89015 3.04263 3.14534 3.17970 3.23561 3.36905 3.40217 3.59382 3.68226 3.71991 3.83504 3.87881 3.92269 3.93418 4.01983 4.05375 4.11935 4.16581 4.19844 4.22083 4.24756 4.29312 4.44046 4.48243 4.49151 4.51168 4.53585 4.54883 4.61241 4.65064 4.74507 4.79679 4.87650 4.96316 4.98738 5.18665 5.28955 5.35617 6.03155 6.19525 6.61512 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.154 4.154 2 C 0.060 3.940 3 O -0.353 6.353 4 C 0.476 3.524 5 O -0.503 6.503 6 C -0.110 4.110 7 H 0.139 0.861 8 C -0.122 4.122 9 C 0.105 3.895 10 F -0.169 7.169 11 C -0.681 4.681 12 S 2.592 3.408 13 O -0.932 6.932 14 O -0.907 6.907 15 O -0.644 6.644 16 C 0.022 3.978 17 C 0.179 3.821 18 O -0.297 6.297 19 C 0.021 3.979 20 C -0.198 4.198 21 C 0.009 3.991 22 C -0.131 4.131 23 C -0.142 4.142 24 C -0.067 4.067 25 O -0.524 6.524 26 Si 0.675 3.325 27 C -0.093 4.093 28 C -0.143 4.143 29 H 0.068 0.932 30 H 0.068 0.932 31 H 0.082 0.918 32 H 0.072 0.928 33 H 0.071 0.929 34 H 0.102 0.898 35 H 0.119 0.881 36 H 0.157 0.843 37 H 0.150 0.850 38 H 0.109 0.891 39 H 0.062 0.938 40 H 0.064 0.936 41 H 0.149 0.851 42 H 0.083 0.917 43 H 0.089 0.911 44 H 0.073 0.927 45 H 0.125 0.875 46 H 0.376 0.624 47 H -0.256 1.256 48 H -0.248 1.248 49 H 0.148 0.852 50 H 0.114 0.886 51 H 0.111 0.889 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.636 -3.915 -4.376 5.906 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.211 4.211 2 C -0.013 4.013 3 O -0.269 6.269 4 C 0.318 3.682 5 O -0.391 6.391 6 C -0.129 4.129 7 H 0.157 0.843 8 C -0.160 4.160 9 C 0.085 3.915 10 F -0.149 7.149 11 C -0.804 4.804 12 S 2.684 3.316 13 O -0.930 6.930 14 O -0.905 6.905 15 O -0.603 6.603 16 C -0.021 4.021 17 C 0.129 3.871 18 O -0.208 6.208 19 C -0.073 4.073 20 C -0.217 4.217 21 C 0.008 3.992 22 C -0.187 4.187 23 C -0.143 4.143 24 C -0.177 4.177 25 O -0.330 6.330 26 Si 0.577 3.423 27 C -0.113 4.113 28 C -0.180 4.180 29 H 0.087 0.913 30 H 0.087 0.913 31 H 0.101 0.899 32 H 0.090 0.910 33 H 0.090 0.910 34 H 0.121 0.879 35 H 0.137 0.863 36 H 0.175 0.825 37 H 0.168 0.832 38 H 0.127 0.873 39 H 0.081 0.919 40 H 0.083 0.917 41 H 0.167 0.833 42 H 0.101 0.899 43 H 0.108 0.892 44 H 0.092 0.908 45 H 0.143 0.857 46 H 0.224 0.776 47 H -0.181 1.181 48 H -0.172 1.172 49 H 0.166 0.834 50 H 0.132 0.868 51 H 0.129 0.871 Dipole moment (debyes) X Y Z Total from point charges -0.126 -3.911 -4.209 5.747 hybrid contribution -0.933 -0.573 0.762 1.334 sum -1.059 -4.484 -3.447 5.754 Atomic orbital electron populations 1.21831 0.92173 1.03340 1.03793 1.23127 0.95762 0.79600 1.02812 1.86523 1.23995 1.32967 1.83462 1.23219 0.80897 0.91807 0.72258 1.90685 1.60552 1.42734 1.45124 1.22493 0.97155 0.92107 1.01099 0.84323 1.23590 0.93791 0.97752 1.00910 1.21133 0.95385 0.82153 0.92833 1.93018 1.97008 1.41393 1.83531 1.31433 1.09609 1.25290 1.14110 1.05840 0.74211 0.76322 0.75225 1.93655 1.45934 1.86562 1.66879 1.93681 1.82304 1.39904 1.74603 1.85791 1.67179 1.59100 1.48249 1.17059 1.08948 0.85839 0.90234 1.19020 0.90855 0.85146 0.92054 1.86204 1.69445 1.23436 1.41726 1.23287 0.95901 1.04000 0.84111 1.21208 1.07057 0.92434 1.00979 1.19807 0.91568 0.93931 0.93861 1.21050 1.02687 0.97645 0.97322 1.19839 1.03312 0.95872 0.95319 1.24886 0.95243 0.87769 1.09771 1.86621 1.44185 1.54552 1.47662 0.94998 0.85215 0.84476 0.77657 1.21138 0.98727 0.90256 1.01137 1.23762 0.96133 1.01776 0.96341 0.91274 0.91270 0.89924 0.90985 0.91017 0.87914 0.86262 0.82526 0.83200 0.87254 0.91893 0.91694 0.83340 0.89867 0.89222 0.90770 0.85684 0.77600 1.18098 1.17237 0.83437 0.86784 0.87067 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 28. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.28 10.29 37.16 0.38 0.66 16 2 C 0.06 -0.01 6.19 37.16 0.23 0.22 16 3 O -0.35 -0.47 10.22 -39.24 -0.40 -0.87 16 4 C 0.48 0.69 7.48 36.01 0.27 0.96 16 5 O -0.50 -1.87 15.65 -18.75 -0.29 -2.17 16 6 C -0.11 0.06 4.24 -90.96 -0.39 -0.32 16 7 H 0.14 -0.27 8.14 -51.93 -0.42 -0.70 16 8 C -0.12 0.11 6.86 -25.91 -0.18 -0.07 16 9 C 0.10 0.03 1.62 -89.81 -0.15 -0.12 16 10 F -0.17 -0.45 16.28 2.25 0.04 -0.42 16 11 C -0.68 0.42 5.19 37.16 0.19 0.61 16 12 S 2.59 8.98 4.89 -107.50 -0.53 8.45 16 13 O -0.93 -4.31 15.81 -68.54 -1.08 -5.39 16 14 O -0.91 -6.45 17.54 -67.03 -1.18 -7.63 16 15 O -0.64 -2.04 9.84 -54.22 -0.53 -2.58 16 16 C 0.02 0.04 4.80 -39.12 -0.19 -0.15 16 17 C 0.18 0.35 5.93 -39.12 -0.23 0.12 16 18 O -0.30 -0.84 9.72 -41.56 -0.40 -1.25 16 19 C 0.02 -0.03 9.81 101.05 0.99 0.96 16 20 C -0.20 0.13 8.69 -39.46 -0.34 -0.22 16 21 C 0.01 -0.01 5.88 -104.62 -0.62 -0.63 16 22 C -0.13 0.39 9.32 36.00 0.34 0.72 16 23 C -0.14 0.22 5.26 -104.61 -0.55 -0.33 16 24 C -0.07 0.16 1.88 36.01 0.07 0.23 16 25 O -0.52 0.66 11.92 -35.23 -0.42 0.24 16 26 Si 0.68 -1.65 30.23 -169.99 -5.14 -6.79 16 27 C -0.09 0.07 7.07 -39.46 -0.28 -0.20 16 28 C -0.14 0.10 7.08 -25.92 -0.18 -0.09 16 29 H 0.07 -0.12 8.14 -51.93 -0.42 -0.54 16 30 H 0.07 -0.12 8.14 -51.93 -0.42 -0.54 16 31 H 0.08 -0.25 8.14 -51.93 -0.42 -0.68 16 32 H 0.07 -0.01 8.13 -51.93 -0.42 -0.43 16 33 H 0.07 -0.02 8.13 -51.93 -0.42 -0.45 16 34 H 0.10 -0.18 8.14 -51.93 -0.42 -0.60 16 35 H 0.12 -0.14 7.39 -51.93 -0.38 -0.52 16 36 H 0.16 -0.47 8.14 -51.93 -0.42 -0.89 16 37 H 0.15 -0.48 6.43 -51.92 -0.33 -0.82 16 38 H 0.11 -0.30 8.14 -51.93 -0.42 -0.72 16 39 H 0.06 -0.21 7.66 -51.93 -0.40 -0.61 16 40 H 0.06 -0.17 7.66 -51.93 -0.40 -0.57 16 41 H 0.15 -0.44 6.30 -52.48 -0.33 -0.78 16 42 H 0.08 -0.33 8.14 -51.93 -0.42 -0.76 16 43 H 0.09 -0.20 6.19 -51.93 -0.32 -0.52 16 44 H 0.07 -0.26 8.08 -51.93 -0.42 -0.68 16 45 H 0.13 -0.44 7.38 -51.93 -0.38 -0.82 16 46 H 0.38 -1.39 8.70 45.56 0.40 -1.00 16 47 H -0.26 0.44 6.69 56.52 0.38 0.82 16 48 H -0.25 -0.22 7.11 56.52 0.40 0.18 16 49 H 0.15 -0.44 4.32 -52.49 -0.23 -0.67 16 50 H 0.11 -0.23 7.91 -51.93 -0.41 -0.64 16 51 H 0.11 -0.12 8.14 -51.93 -0.42 -0.54 16 LS Contribution 431.06 15.07 6.50 6.50 Total: 0.00 -11.83 431.06 -11.15 -22.98 By element: Atomic # 1 Polarization: -6.37 SS G_CDS: -7.08 Total: -13.45 kcal Atomic # 6 Polarization: 2.99 SS G_CDS: -0.63 Total: 2.36 kcal Atomic # 8 Polarization: -15.32 SS G_CDS: -4.31 Total: -19.64 kcal Atomic # 9 Polarization: -0.45 SS G_CDS: 0.04 Total: -0.42 kcal Atomic # 14 Polarization: -1.65 SS G_CDS: -5.14 Total: -6.79 kcal Atomic # 16 Polarization: 8.98 SS G_CDS: -0.53 Total: 8.45 kcal Total LS contribution 6.50 Total: 6.50 kcal Total: -11.83 -11.15 -22.98 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_40_14060150_16464788.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -214.599 kcal (2) G-P(sol) polarization free energy of solvation -11.831 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -226.430 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.153 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.984 kcal (6) G-S(sol) free energy of system = (1) + (5) -237.583 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 2.43 seconds