Wall clock time and date at job start Tue Mar 9 2021 13:11:26 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42907 * 1 3 3 Si 1.86298 * 109.46858 * 2 1 4 4 C 1.50699 * 109.46603 * 119.99410 * 2 1 3 5 5 C 1.33388 * 125.20816 * 65.00041 * 4 2 1 6 6 C 1.38420 * 114.92511 * 179.97438 * 5 4 2 7 7 S 1.76201 * 122.53853 * 179.97438 * 6 5 4 8 8 O 1.42101 * 106.40246 * 203.54384 * 7 6 5 9 9 O 1.42098 * 106.40319 * 336.46422 * 7 6 5 10 10 N 1.65596 * 107.21990 * 90.00474 * 7 6 5 11 11 C 1.46501 * 119.99944 * 64.99377 * 10 7 6 12 12 H 1.09002 * 112.85014 * 13.81255 * 11 10 7 13 13 C 1.53787 * 113.60975 * 145.00135 * 11 10 7 14 14 C 1.53779 * 87.07918 * 89.11955 * 13 11 10 15 15 O 1.42901 * 113.61520 * 270.79745 * 14 13 11 16 16 C 1.53004 * 113.61631 * 139.97795 * 14 13 11 17 17 F 1.39901 * 109.46943 * 60.00082 * 16 14 13 18 18 F 1.39897 * 109.47554 * 179.97438 * 16 14 13 19 19 F 1.39908 * 109.47057 * 300.00344 * 16 14 13 20 20 C 1.53776 * 113.61797 * 242.50024 * 11 10 7 21 21 C 1.33387 * 114.92396 * 0.02562 * 6 5 4 22 22 S 1.75890 * 109.59018 * 359.75619 * 21 6 5 23 23 H 0.96697 * 114.00527 * 300.00583 * 1 2 3 24 24 H 1.08996 * 109.47455 * 239.99290 * 2 1 3 25 25 H 1.48506 * 109.99834 * 178.67912 * 3 2 1 26 26 H 1.48502 * 110.00011 * 299.99177 * 3 2 1 27 27 H 1.08008 * 122.53471 * 359.96267 * 5 4 2 28 28 H 0.97005 * 120.00349 * 245.00465 * 10 7 6 29 29 H 1.09000 * 113.61351 * 203.66457 * 13 11 10 30 30 H 1.08996 * 113.61861 * 334.48768 * 13 11 10 31 31 H 0.96700 * 113.99744 * 179.97438 * 15 14 13 32 32 H 1.08997 * 113.61282 * 25.43034 * 20 11 10 33 33 H 1.09001 * 113.61597 * 156.33959 * 20 11 10 34 34 H 1.07999 * 125.20818 * 179.97438 * 21 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7103 1.2306 5 6 1.7533 -2.0050 1.4977 6 6 2.3061 -2.4357 2.6914 7 16 2.1898 -4.1055 3.2417 8 8 2.3429 -4.0741 4.6541 9 8 1.0537 -4.6628 2.5953 10 7 3.5085 -4.9109 2.6463 11 6 4.8543 -4.5451 3.0949 12 1 4.8471 -3.9099 3.9807 13 6 5.8142 -5.7418 3.2027 14 6 6.1767 -5.4829 1.7308 15 8 5.3391 -6.1773 0.8043 16 6 7.6667 -5.6528 1.4276 17 9 8.0578 -6.9616 1.7299 18 9 7.8986 -5.3988 0.0715 19 9 8.4061 -4.7540 2.2040 20 6 5.7588 -4.0218 1.9667 21 6 2.9326 -1.4907 3.3940 22 16 2.8476 0.0397 2.5312 23 1 -0.3934 0.4417 0.7649 24 1 1.7924 -0.5139 -0.8899 25 1 3.5346 1.7703 0.0322 26 1 1.5616 2.4678 -1.2086 27 1 1.2182 -2.6670 0.8329 28 1 3.3899 -5.6248 2.0003 29 1 6.6423 -5.5765 3.8919 30 1 5.3089 -6.6932 3.3685 31 1 5.5621 -6.0181 -0.1231 32 1 5.2087 -3.5851 1.1331 33 1 6.5718 -3.3864 2.3180 34 1 3.4207 -1.6428 4.3453 There are 59 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 59 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV m_40_17047582_15065232.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:11:26 Heat of formation + Delta-G solvation = -229.261406 kcal Electronic energy + Delta-G solvation = -28941.973889 eV Core-core repulsion = 24067.955739 eV Total energy + Delta-G solvation = -4874.018150 eV No. of doubly occupied orbitals = 59 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 360.019 amu Computer time = 1.10 seconds Orbital eigenvalues (eV) -51.30132 -48.85659 -48.74891 -41.32261 -39.56872 -38.29299 -37.62824 -36.91527 -36.83016 -33.80630 -31.92810 -28.72652 -27.42066 -27.30486 -24.99441 -24.30519 -21.59031 -21.47313 -20.64888 -19.95420 -19.59826 -19.50568 -19.21116 -18.58432 -17.96385 -17.71834 -17.37518 -17.16326 -16.41976 -16.25523 -15.86470 -15.65807 -15.52804 -15.51749 -15.21560 -15.11635 -14.98846 -14.94752 -14.88663 -14.49425 -14.35179 -14.25016 -14.15664 -14.01261 -13.35953 -13.21793 -13.15060 -13.03618 -12.95417 -12.82113 -12.56769 -12.28864 -12.12654 -11.72135 -11.42299 -10.88109 -10.72182 -10.29435 -9.95453 -5.32340 -0.84499 -0.57431 0.22147 0.48823 0.90647 1.05980 1.38996 1.42545 1.74595 1.85628 2.20158 2.44814 2.47936 2.64330 2.69093 3.08324 3.17940 3.23773 3.30675 3.36432 3.52784 3.71084 3.80143 3.92630 4.12976 4.17441 4.24672 4.26655 4.40674 4.55457 4.56307 4.81817 4.84288 4.98024 5.78880 5.94251 6.34853 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.532 6.532 2 C -0.027 4.027 3 Si 0.656 3.344 4 C -0.229 4.229 5 C -0.041 4.041 6 C -0.686 4.686 7 S 2.710 3.290 8 O -0.950 6.950 9 O -0.946 6.946 10 N -1.093 6.093 11 C 0.139 3.861 12 H 0.121 0.879 13 C -0.123 4.123 14 C 0.063 3.937 15 O -0.511 6.511 16 C 0.434 3.566 17 F -0.174 7.174 18 F -0.183 7.183 19 F -0.174 7.174 20 C -0.176 4.176 21 C -0.087 4.087 22 S 0.160 5.840 23 H 0.382 0.618 24 H 0.126 0.874 25 H -0.238 1.238 26 H -0.231 1.231 27 H 0.157 0.843 28 H 0.428 0.572 29 H 0.122 0.878 30 H 0.106 0.894 31 H 0.394 0.606 32 H 0.099 0.901 33 H 0.118 0.882 34 H 0.186 0.814 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.462 4.229 0.710 4.944 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.338 6.338 2 C -0.140 4.140 3 Si 0.555 3.445 4 C -0.347 4.347 5 C -0.070 4.070 6 C -0.786 4.786 7 S 2.796 3.204 8 O -0.940 6.940 9 O -0.937 6.937 10 N -0.853 5.853 11 C 0.031 3.969 12 H 0.139 0.861 13 C -0.162 4.162 14 C 0.019 3.981 15 O -0.318 6.318 16 C 0.379 3.621 17 F -0.155 7.155 18 F -0.164 7.164 19 F -0.156 7.156 20 C -0.216 4.216 21 C -0.226 4.226 22 S 0.424 5.576 23 H 0.230 0.770 24 H 0.143 0.857 25 H -0.162 1.162 26 H -0.154 1.154 27 H 0.174 0.826 28 H 0.266 0.734 29 H 0.141 0.859 30 H 0.125 0.875 31 H 0.244 0.756 32 H 0.117 0.883 33 H 0.136 0.864 34 H 0.203 0.797 Dipole moment (debyes) X Y Z Total from point charges 2.667 5.594 1.145 6.302 hybrid contribution 0.516 -1.565 -1.754 2.407 sum 3.183 4.029 -0.609 5.171 Atomic orbital electron populations 1.86552 1.16359 1.81669 1.49187 1.24453 0.85439 1.09152 0.94986 0.95042 0.81993 0.77412 0.90028 1.25079 1.08793 0.98333 1.02467 1.19605 0.97560 0.95176 0.94674 1.30039 1.15490 1.25972 1.07081 1.01651 0.72287 0.72756 0.73704 1.93620 1.85796 1.86547 1.28039 1.93632 1.46760 1.76649 1.76613 1.55425 1.18772 1.50129 1.60944 1.21389 0.81655 0.97009 0.96880 0.86097 1.23544 1.00552 1.01558 0.90580 1.23607 0.83437 0.96548 0.94487 1.86561 1.54887 1.70455 1.19879 1.21240 0.92071 0.74343 0.74442 1.93238 1.92569 1.36915 1.92769 1.93191 1.95706 1.93931 1.33590 1.93193 1.79458 1.67942 1.74958 1.24332 1.01396 0.94390 1.01456 1.25927 0.98501 0.95893 1.02244 1.84370 1.50228 1.10950 1.12082 0.77035 0.85726 1.16215 1.15393 0.82578 0.73416 0.85943 0.87505 0.75551 0.88268 0.86378 0.79673 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 30. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 0.28 12.88 -35.23 -0.45 -0.17 16 2 C -0.03 0.04 2.96 36.01 0.11 0.14 16 3 Si 0.66 -1.38 30.98 -169.99 -5.27 -6.65 16 4 C -0.23 0.26 5.70 -36.00 -0.21 0.05 16 5 C -0.04 0.01 9.59 -41.21 -0.40 -0.39 16 6 C -0.69 0.54 5.86 -41.21 -0.24 0.30 16 7 S 2.71 0.82 5.77 -107.50 -0.62 0.20 16 8 O -0.95 -2.50 17.16 -57.17 -0.98 -3.48 16 9 O -0.95 -3.59 17.63 -57.17 -1.01 -4.60 16 10 N -1.09 2.45 5.68 -4.20 -0.02 2.42 16 11 C 0.14 -0.50 4.51 -67.12 -0.30 -0.80 16 12 H 0.12 -0.62 7.77 -51.93 -0.40 -1.02 16 13 C -0.12 0.41 7.05 -25.92 -0.18 0.23 16 14 C 0.06 -0.18 1.36 -89.80 -0.12 -0.30 16 15 O -0.51 1.48 12.00 -35.23 -0.42 1.05 16 16 C 0.43 -0.48 2.85 37.16 0.11 -0.37 16 17 F -0.17 -0.13 17.18 2.25 0.04 -0.09 16 18 F -0.18 0.08 16.65 2.25 0.04 0.11 16 19 F -0.17 0.15 15.75 2.25 0.04 0.19 16 20 C -0.18 0.74 7.15 -25.92 -0.19 0.56 16 21 C -0.09 0.19 10.70 29.04 0.31 0.50 16 22 S 0.16 -0.39 20.59 -107.50 -2.21 -2.60 16 23 H 0.38 -1.63 8.70 45.56 0.40 -1.23 16 24 H 0.13 -0.19 7.96 -51.93 -0.41 -0.60 16 25 H -0.24 0.07 7.11 56.52 0.40 0.48 16 26 H -0.23 -0.17 7.11 56.52 0.40 0.23 16 27 H 0.16 -0.01 7.97 -52.48 -0.42 -0.43 16 28 H 0.43 -1.09 7.53 -34.47 -0.26 -1.35 16 29 H 0.12 -0.58 7.88 -51.93 -0.41 -0.99 16 30 H 0.11 -0.30 8.14 -51.93 -0.42 -0.73 16 31 H 0.39 -2.14 8.42 45.56 0.38 -1.75 16 32 H 0.10 -0.44 8.14 -51.93 -0.42 -0.86 16 33 H 0.12 -0.61 7.13 -51.93 -0.37 -0.98 16 34 H 0.19 -0.82 8.00 -52.49 -0.42 -1.24 16 LS Contribution 331.88 15.07 5.00 5.00 Total: 0.00 -10.24 331.88 -8.94 -19.19 By element: Atomic # 1 Polarization: -8.53 SS G_CDS: -1.96 Total: -10.49 kcal Atomic # 6 Polarization: 1.03 SS G_CDS: -1.11 Total: -0.08 kcal Atomic # 7 Polarization: 2.45 SS G_CDS: -0.02 Total: 2.42 kcal Atomic # 8 Polarization: -4.34 SS G_CDS: -2.87 Total: -7.20 kcal Atomic # 9 Polarization: 0.10 SS G_CDS: 0.11 Total: 0.21 kcal Atomic # 14 Polarization: -1.38 SS G_CDS: -5.27 Total: -6.65 kcal Atomic # 16 Polarization: 0.43 SS G_CDS: -2.83 Total: -2.40 kcal Total LS contribution 5.00 Total: 5.00 kcal Total: -10.24 -8.94 -19.19 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_40_17047582_15065232.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -210.075 kcal (2) G-P(sol) polarization free energy of solvation -10.242 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -220.317 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.944 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.187 kcal (6) G-S(sol) free energy of system = (1) + (5) -229.261 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.10 seconds