Wall clock time and date at job start Tue Mar 9 2021 13:15:11 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42901 * 1 3 3 C 1.35955 * 116.99895 * 2 1 4 4 C 1.38909 * 120.06364 * 180.02562 * 3 2 1 5 5 F 1.35098 * 120.04688 * 359.97438 * 4 3 2 6 6 C 1.38333 * 119.90259 * 179.97438 * 4 3 2 7 7 C 1.38256 * 120.03238 * 359.96809 * 6 4 3 8 8 C 1.50697 * 119.93555 * 180.02562 * 7 6 4 9 9 H 1.09002 * 112.85171 * 11.19682 * 8 7 6 10 10 C 1.53782 * 113.61209 * 142.50466 * 8 7 6 11 11 C 1.53789 * 87.07918 * 139.97838 * 10 8 7 12 12 H 1.08992 * 113.61030 * 220.01354 * 11 10 8 13 13 N 1.46507 * 113.68750 * 89.12764 * 11 10 8 14 14 S 1.65601 * 119.99895 * 117.04757 * 13 11 10 15 15 O 1.42097 * 106.40029 * 178.82049 * 14 13 11 16 16 O 1.42099 * 106.40026 * 311.74542 * 14 13 11 17 17 C 1.76204 * 107.21608 * 65.28450 * 14 13 11 18 18 C 1.38206 * 119.99960 * 64.57782 * 17 14 13 19 19 C 1.50697 * 120.00464 * 359.97438 * 18 17 14 20 20 O 1.42909 * 109.46624 * 284.73702 * 19 18 17 21 21 Si 1.86301 * 109.47430 * 164.73828 * 19 18 17 22 22 C 1.38263 * 119.99972 * 180.02562 * 18 17 14 23 23 C 1.38216 * 119.99397 * 359.97438 * 22 18 17 24 24 C 1.38249 * 120.00533 * 359.97438 * 23 22 18 25 25 C 1.38214 * 120.00067 * 359.81515 * 24 23 22 26 26 C 1.53773 * 87.08008 * 334.56903 * 11 10 8 27 27 C 1.38259 * 120.12421 * 0.28584 * 7 6 4 28 28 C 1.38184 * 120.09679 * 359.48428 * 27 7 6 29 29 H 1.09000 * 109.46898 * 60.00592 * 1 2 3 30 30 H 1.09004 * 109.46862 * 180.02562 * 1 2 3 31 31 H 1.08994 * 109.47429 * 300.00261 * 1 2 3 32 32 H 1.07997 * 119.98071 * 179.97438 * 6 4 3 33 33 H 1.08999 * 113.61929 * 25.43162 * 10 8 7 34 34 H 1.08998 * 113.61306 * 254.52242 * 10 8 7 35 35 H 0.96999 * 119.99749 * 297.04544 * 13 11 10 36 36 H 1.08996 * 109.47182 * 44.72867 * 19 18 17 37 37 H 0.96700 * 113.99445 * 180.02562 * 20 19 18 38 38 H 1.48506 * 109.99631 * 298.67642 * 21 19 18 39 39 H 1.48491 * 110.00027 * 59.99633 * 21 19 18 40 40 H 1.07999 * 120.00109 * 179.97438 * 22 18 17 41 41 H 1.08001 * 119.99465 * 179.97438 * 23 22 18 42 42 H 1.07999 * 120.00141 * 179.97438 * 24 23 22 43 43 H 1.08002 * 120.00149 * 180.23418 * 25 24 23 44 44 H 1.09001 * 113.61815 * 139.98409 * 26 11 10 45 45 H 1.09008 * 113.61319 * 270.79572 * 26 11 10 46 46 H 1.08002 * 119.94988 * 179.72560 * 27 7 6 47 47 H 1.08000 * 120.01799 * 180.28335 * 28 27 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0462 1.2114 0.0000 4 6 3.4333 1.2856 -0.0005 5 9 4.1713 0.1541 -0.0005 6 6 4.0578 2.5200 -0.0011 7 6 3.3022 3.6778 -0.0017 8 6 3.9848 5.0213 -0.0029 9 1 5.0550 4.9522 -0.1982 10 6 3.2670 6.0762 -0.8612 11 6 3.5892 7.0871 0.2521 12 1 2.7762 7.7829 0.4586 13 7 4.8817 7.7561 0.0836 14 16 4.9425 9.3960 -0.1386 15 8 6.3183 9.7364 -0.2401 16 8 3.9900 9.6996 -1.1484 17 6 4.3526 10.1452 1.3432 18 6 5.0552 9.9899 2.5231 19 6 6.3255 9.1794 2.5427 20 8 6.0038 7.7883 2.4825 21 14 7.2634 9.5325 4.1132 22 6 4.5921 10.5773 3.6859 23 6 3.4267 11.3203 3.6680 24 6 2.7245 11.4765 2.4875 25 6 3.1898 10.8929 1.3242 26 6 3.6361 5.8905 1.2168 27 6 1.9216 3.6053 0.0041 28 6 1.2922 2.3751 -0.0002 29 1 -0.3633 0.5137 -0.8900 30 1 -0.3633 -1.0277 0.0005 31 1 -0.3634 0.5138 0.8899 32 1 5.1362 2.5792 -0.0011 33 1 2.2005 5.8872 -0.9840 34 1 3.7714 6.2891 -1.8037 35 1 5.7018 7.2384 0.1022 36 1 6.9408 9.4474 1.6839 37 1 6.7754 7.2055 2.4917 38 1 7.6315 10.9700 4.1726 39 1 6.4352 9.1712 5.2915 40 1 5.1409 10.4557 4.6081 41 1 3.0647 11.7788 4.5764 42 1 1.8137 12.0567 2.4736 43 1 2.6432 11.0180 0.4011 44 1 4.4385 5.9534 1.9519 45 1 2.6708 5.6515 1.6633 46 1 1.3341 4.5115 0.0080 47 1 0.2136 2.3200 -0.0002 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV m_40_9824368_2726874.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:15:11 Heat of formation + Delta-G solvation = -88.895930 kcal Electronic energy + Delta-G solvation = -35206.946674 eV Core-core repulsion = 30364.791133 eV Total energy + Delta-G solvation = -4842.155542 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 394.113 amu Computer time = 2.05 seconds Orbital eigenvalues (eV) -49.64005 -41.44128 -40.73995 -40.32426 -38.45112 -38.13516 -37.52421 -36.84428 -34.00696 -33.06633 -32.51046 -31.81917 -30.97399 -28.42598 -27.02762 -26.66748 -25.79942 -24.51816 -23.83157 -22.85698 -22.62789 -20.87673 -20.28610 -19.42729 -19.14704 -18.57942 -18.43347 -17.91352 -17.48473 -17.39552 -17.09566 -17.07544 -16.70539 -16.31653 -15.99423 -15.96253 -15.81970 -15.66153 -15.30804 -15.29273 -15.12109 -14.94317 -14.40088 -14.16928 -13.98613 -13.89767 -13.68929 -13.59696 -13.52392 -13.34103 -13.23087 -13.14265 -13.05886 -12.98237 -12.77743 -12.39506 -12.34620 -12.18859 -12.16310 -11.79075 -11.71410 -11.48465 -11.29436 -10.61099 -10.45982 -10.37065 -10.15536 -9.92347 -9.05413 -5.09047 -0.63407 -0.33523 0.01526 0.12995 0.21108 1.11526 1.53523 1.82853 1.91090 2.15238 2.25485 2.49498 2.70077 3.06459 3.23052 3.35003 3.45619 3.54674 3.61589 3.63545 3.68983 3.72490 3.78857 3.90873 3.98471 4.01495 4.02771 4.09687 4.15168 4.16952 4.20972 4.25807 4.36999 4.46342 4.48113 4.52673 4.64795 4.68493 4.71041 4.83289 4.89585 4.91690 5.00260 5.01886 5.07134 5.12353 5.14590 5.16578 5.37338 5.55318 5.59838 5.63192 6.02127 6.27322 6.36935 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.026 3.974 2 O -0.311 6.311 3 C 0.091 3.909 4 C 0.071 3.929 5 F -0.132 7.132 6 C -0.112 4.112 7 C -0.077 4.077 8 C -0.069 4.069 9 H 0.101 0.899 10 C -0.146 4.146 11 C 0.136 3.864 12 H 0.096 0.904 13 N -1.077 6.077 14 S 2.701 3.299 15 O -0.958 6.958 16 O -0.956 6.956 17 C -0.659 4.659 18 C 0.036 3.964 19 C -0.129 4.129 20 O -0.535 6.535 21 Si 0.701 3.299 22 C -0.145 4.145 23 C -0.057 4.057 24 C -0.134 4.134 25 C -0.021 4.021 26 C -0.132 4.132 27 C -0.087 4.087 28 C -0.178 4.178 29 H 0.058 0.942 30 H 0.104 0.896 31 H 0.058 0.942 32 H 0.142 0.858 33 H 0.096 0.904 34 H 0.080 0.920 35 H 0.420 0.580 36 H 0.112 0.888 37 H 0.385 0.615 38 H -0.254 1.254 39 H -0.249 1.249 40 H 0.130 0.870 41 H 0.135 0.865 42 H 0.138 0.862 43 H 0.148 0.852 44 H 0.092 0.908 45 H 0.091 0.909 46 H 0.133 0.867 47 H 0.138 0.862 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.659 -0.141 3.514 3.888 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.069 4.069 2 O -0.224 6.224 3 C 0.044 3.956 4 C 0.051 3.949 5 F -0.111 7.111 6 C -0.131 4.131 7 C -0.078 4.078 8 C -0.088 4.088 9 H 0.120 0.880 10 C -0.185 4.185 11 C 0.028 3.972 12 H 0.114 0.886 13 N -0.836 5.836 14 S 2.790 3.210 15 O -0.948 6.948 16 O -0.946 6.946 17 C -0.745 4.745 18 C 0.035 3.965 19 C -0.239 4.239 20 O -0.342 6.342 21 Si 0.602 3.398 22 C -0.164 4.164 23 C -0.075 4.075 24 C -0.153 4.153 25 C -0.041 4.041 26 C -0.171 4.171 27 C -0.105 4.105 28 C -0.197 4.197 29 H 0.077 0.923 30 H 0.122 0.878 31 H 0.076 0.924 32 H 0.160 0.840 33 H 0.114 0.886 34 H 0.099 0.901 35 H 0.256 0.744 36 H 0.130 0.870 37 H 0.234 0.766 38 H -0.179 1.179 39 H -0.174 1.174 40 H 0.147 0.853 41 H 0.153 0.847 42 H 0.156 0.844 43 H 0.166 0.834 44 H 0.110 0.890 45 H 0.109 0.891 46 H 0.151 0.849 47 H 0.156 0.844 Dipole moment (debyes) X Y Z Total from point charges -2.017 0.870 3.508 4.139 hybrid contribution -0.564 -0.096 0.491 0.754 sum -2.581 0.774 3.999 4.822 Atomic orbital electron populations 1.23145 0.77653 1.04548 1.01542 1.86153 1.21920 1.25740 1.88593 1.19058 0.90903 0.85780 0.99825 1.16991 0.85983 0.83086 1.08802 1.91517 1.76336 1.49015 1.94209 1.20920 1.01014 0.89675 1.01451 1.19462 0.93129 0.94160 1.01038 1.21528 0.99750 0.89649 0.97847 0.88044 1.23619 1.01649 0.94800 0.98439 1.21467 0.84306 0.94432 0.97003 0.88550 1.55022 1.13709 1.25199 1.89673 1.01742 0.73504 0.72403 0.73373 1.93562 1.32572 1.82418 1.86223 1.93602 1.63726 1.83401 1.53846 1.30822 1.07420 1.16557 1.19669 1.18847 0.92442 0.93148 0.92063 1.25322 0.98546 0.85088 1.14978 1.86507 1.36561 1.13553 1.97610 0.94759 0.85583 0.84094 0.75372 1.21178 0.97677 1.00020 0.97490 1.21461 0.93197 0.94230 0.98651 1.21392 1.00780 1.00602 0.92530 1.21098 0.92181 0.91257 0.99519 1.23435 1.03568 0.93623 0.96471 1.20875 0.94031 0.97244 0.98348 1.21152 1.00395 0.91423 1.06753 0.92319 0.87770 0.92351 0.84006 0.88608 0.90095 0.74389 0.87036 0.76630 1.17855 1.17427 0.85296 0.84719 0.84445 0.83447 0.88970 0.89102 0.84876 0.84430 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 28. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.04 9.81 101.05 0.99 0.95 16 2 O -0.31 -0.86 10.36 -19.60 -0.20 -1.06 16 3 C 0.09 0.21 6.69 -39.18 -0.26 -0.05 16 4 C 0.07 0.20 7.31 -39.30 -0.29 -0.09 16 5 F -0.13 -0.62 17.11 2.25 0.04 -0.58 16 6 C -0.11 -0.04 9.68 -39.54 -0.38 -0.43 16 7 C -0.08 0.07 5.29 -104.61 -0.55 -0.48 16 8 C -0.07 0.18 3.81 -90.96 -0.35 -0.16 16 9 H 0.10 -0.36 8.07 -51.93 -0.42 -0.78 16 10 C -0.15 0.32 7.25 -25.91 -0.19 0.13 16 11 C 0.14 -0.29 4.43 -67.11 -0.30 -0.59 16 12 H 0.10 -0.21 8.05 -51.93 -0.42 -0.63 16 13 N -1.08 1.95 4.01 -4.20 -0.02 1.93 16 14 S 2.70 4.03 5.02 -107.50 -0.54 3.49 16 15 O -0.96 -3.41 15.52 -57.17 -0.89 -4.30 16 16 O -0.96 -3.97 16.72 -57.17 -0.96 -4.92 16 17 C -0.66 -0.95 5.88 -39.58 -0.23 -1.18 16 18 C 0.04 0.05 5.28 -104.63 -0.55 -0.51 16 19 C -0.13 0.13 2.02 36.00 0.07 0.20 16 20 O -0.54 1.84 9.47 -35.23 -0.33 1.51 16 21 Si 0.70 -1.25 30.21 -169.99 -5.14 -6.38 16 22 C -0.15 -0.15 8.66 -39.58 -0.34 -0.50 16 23 C -0.06 0.01 10.05 -39.59 -0.40 -0.39 16 24 C -0.13 0.04 10.05 -39.59 -0.40 -0.36 16 25 C -0.02 -0.02 9.55 -39.58 -0.38 -0.40 16 26 C -0.13 0.39 7.33 -25.92 -0.19 0.20 16 27 C -0.09 0.09 8.59 -39.59 -0.34 -0.25 16 28 C -0.18 0.02 9.04 -39.44 -0.36 -0.33 16 29 H 0.06 -0.15 7.66 -51.93 -0.40 -0.55 16 30 H 0.10 -0.29 8.14 -51.93 -0.42 -0.71 16 31 H 0.06 -0.15 7.66 -51.93 -0.40 -0.55 16 32 H 0.14 -0.19 8.05 -52.49 -0.42 -0.62 16 33 H 0.10 -0.27 6.32 -51.93 -0.33 -0.60 16 34 H 0.08 -0.12 8.14 -51.93 -0.42 -0.54 16 35 H 0.42 -1.64 8.26 -34.47 -0.28 -1.92 16 36 H 0.11 -0.08 5.39 -51.93 -0.28 -0.36 16 37 H 0.39 -3.05 8.74 45.56 0.40 -2.65 16 38 H -0.25 -0.34 7.11 56.52 0.40 0.06 16 39 H -0.25 -0.11 6.74 56.52 0.38 0.28 16 40 H 0.13 0.05 4.90 -52.49 -0.26 -0.21 16 41 H 0.13 -0.34 8.06 -52.49 -0.42 -0.76 16 42 H 0.14 -0.37 8.06 -52.49 -0.42 -0.79 16 43 H 0.15 -0.04 7.34 -52.49 -0.39 -0.43 16 44 H 0.09 -0.28 7.08 -51.93 -0.37 -0.65 16 45 H 0.09 -0.26 7.72 -51.92 -0.40 -0.66 16 46 H 0.13 -0.41 6.67 -52.49 -0.35 -0.76 16 47 H 0.14 -0.31 6.30 -52.49 -0.33 -0.64 16 LS Contribution 393.58 15.07 5.93 5.93 Total: 0.00 -11.00 393.58 -12.09 -23.10 By element: Atomic # 1 Polarization: -8.92 SS G_CDS: -5.55 Total: -14.47 kcal Atomic # 6 Polarization: 0.20 SS G_CDS: -4.44 Total: -4.24 kcal Atomic # 7 Polarization: 1.95 SS G_CDS: -0.02 Total: 1.93 kcal Atomic # 8 Polarization: -6.39 SS G_CDS: -2.38 Total: -8.77 kcal Atomic # 9 Polarization: -0.62 SS G_CDS: 0.04 Total: -0.58 kcal Atomic # 14 Polarization: -1.25 SS G_CDS: -5.14 Total: -6.38 kcal Atomic # 16 Polarization: 4.03 SS G_CDS: -0.54 Total: 3.49 kcal Total LS contribution 5.93 Total: 5.93 kcal Total: -11.00 -12.09 -23.10 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_40_9824368_2726874.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -65.800 kcal (2) G-P(sol) polarization free energy of solvation -11.002 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -76.803 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.093 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.096 kcal (6) G-S(sol) free energy of system = (1) + (5) -88.896 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 2.05 seconds