Wall clock time and date at job start Tue Mar 9 2021 13:16:02 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50706 * 1 3 3 C 1.38122 * 119.97728 * 2 1 4 4 C 1.38746 * 119.95564 * 180.02562 * 3 2 1 5 5 O 1.35918 * 120.04206 * 179.97438 * 4 3 2 6 6 C 1.42896 * 116.99834 * 359.97438 * 5 4 3 7 7 C 1.53006 * 109.47051 * 180.02562 * 6 5 4 8 8 C 1.53571 * 109.12221 * 66.45352 * 7 6 5 9 9 C 1.55920 * 109.50277 * 169.52061 * 8 7 6 10 10 Si 1.89654 * 99.33841 * 319.37972 * 9 8 7 11 11 C 1.86301 * 111.45802 * 138.35691 * 10 9 8 12 12 C 1.86297 * 111.45852 * 263.30215 * 10 9 8 13 13 C 1.55354 * 109.09401 * 188.23816 * 7 6 5 14 14 C 1.38699 * 119.91445 * 0.24649 * 4 3 2 15 15 C 1.50698 * 120.02070 * 179.72182 * 14 4 3 16 16 O 1.42897 * 109.47542 * 285.00275 * 15 14 4 17 17 Si 1.86299 * 109.47170 * 165.00226 * 15 14 4 18 18 H 1.48503 * 109.47139 * 300.00408 * 17 15 14 19 19 H 1.48501 * 109.47394 * 60.00048 * 17 15 14 20 20 H 1.48501 * 109.47358 * 180.02562 * 17 15 14 21 21 C 1.38172 * 119.95707 * 359.47666 * 14 4 3 22 22 C 1.38344 * 120.03940 * 0.54813 * 21 14 4 23 23 Cl 1.73604 * 119.95389 * 179.72672 * 22 21 14 24 24 H 1.08997 * 109.46569 * 90.00588 * 1 2 3 25 25 H 1.08999 * 109.47118 * 210.00353 * 1 2 3 26 26 H 1.08997 * 109.47229 * 330.00942 * 1 2 3 27 27 H 1.07998 * 120.01980 * 0.03660 * 3 2 1 28 28 H 1.09007 * 109.47408 * 60.00596 * 6 5 4 29 29 H 1.08996 * 109.47383 * 299.99977 * 6 5 4 30 30 H 1.09001 * 109.01714 * 307.35249 * 7 6 5 31 31 H 1.08995 * 109.47161 * 49.49977 * 8 7 6 32 32 H 1.09000 * 109.47347 * 289.54437 * 8 7 6 33 33 H 1.08998 * 111.42335 * 201.85232 * 9 8 7 34 34 H 1.09003 * 111.42734 * 76.90862 * 9 8 7 35 35 H 1.09002 * 109.47148 * 185.06573 * 11 10 9 36 36 H 1.09001 * 109.46900 * 65.06725 * 11 10 9 37 37 H 1.09004 * 109.47198 * 305.06703 * 11 10 9 38 38 H 1.08995 * 109.47233 * 294.93193 * 12 10 9 39 39 H 1.08997 * 109.47080 * 54.93539 * 12 10 9 40 40 H 1.08998 * 109.47258 * 174.93150 * 12 10 9 41 41 H 1.08995 * 111.07416 * 92.91832 * 13 7 6 42 42 H 1.08996 * 111.09205 * 328.89439 * 13 7 6 43 43 H 1.09002 * 109.46899 * 45.00634 * 15 14 4 44 44 H 0.96697 * 114.00340 * 179.97438 * 16 15 14 45 45 H 1.08002 * 119.97813 * 180.27420 * 21 14 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5071 0.0000 0.0000 3 6 2.1972 1.1964 0.0000 4 6 3.5847 1.1959 -0.0005 5 8 4.2656 2.3723 -0.0011 6 6 3.4886 3.5715 -0.0016 7 6 4.4220 4.7839 -0.0028 8 6 5.1877 4.8280 -1.3333 9 6 5.9363 6.1900 -1.4581 10 14 4.5990 7.3411 -0.7627 11 6 5.3299 8.6328 0.3634 12 6 3.5964 8.1223 -2.1247 13 6 3.5808 6.0731 0.2070 14 6 4.2759 -0.0065 -0.0062 15 6 5.7829 -0.0099 -0.0132 16 8 6.2541 0.3406 -1.3159 17 14 6.4022 -1.7088 0.4349 18 1 5.9125 -2.0730 1.7888 19 1 5.9005 -2.6956 -0.5549 20 1 7.8872 -1.7120 0.4287 21 6 3.5819 -1.2013 -0.0005 22 6 2.1985 -1.1987 -0.0004 23 17 1.3289 -2.7012 -0.0003 24 1 -0.3632 -0.0001 -1.0277 25 1 -0.3633 -0.8899 0.5139 26 1 -0.3633 0.8900 0.5137 27 1 1.6572 2.1317 0.0006 28 1 2.8598 3.5976 0.8885 29 1 2.8598 3.5967 -0.8916 30 1 5.1344 4.6845 0.8162 31 1 4.4855 4.7222 -2.1602 32 1 5.9099 4.0122 -1.3641 33 1 6.1631 6.4258 -2.4979 34 1 6.8360 6.2077 -0.8431 35 1 4.5281 9.2177 0.8140 36 1 5.9802 9.2911 -0.2128 37 1 5.9091 8.1454 1.1477 38 1 4.2357 8.7773 -2.7166 39 1 3.1833 7.3426 -2.7647 40 1 2.7836 8.7039 -1.6899 41 1 3.5274 6.3387 1.2627 42 1 2.5833 5.9641 -0.2186 43 1 6.1511 0.7144 0.7134 44 1 7.2177 0.3587 -1.3939 45 1 4.1199 -2.1379 -0.0004 RHF calculation, no. of doubly occupied orbitals= 56 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV m_7_12058104_18051908.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:16:02 Heat of formation + Delta-G solvation = -110.186400 kcal Electronic energy + Delta-G solvation = -24015.650186 eV Core-core repulsion = 20567.862871 eV Total energy + Delta-G solvation = -3447.787315 eV No. of doubly occupied orbitals = 56 Molecular weight (most abundant/longest-lived isotopes) = 328.117 amu Computer time = 0.48 seconds Orbital eigenvalues (eV) -41.50233 -39.23918 -37.82766 -37.15579 -36.55753 -34.14043 -31.13349 -30.46800 -29.38973 -29.27768 -28.55479 -27.36278 -25.19185 -24.37697 -23.24737 -22.10133 -20.73464 -18.72209 -18.44798 -17.76534 -17.28136 -16.91207 -16.12104 -15.86179 -15.47475 -15.32542 -15.05005 -14.91961 -14.51382 -14.42170 -14.07603 -13.99274 -13.95374 -13.65505 -13.61876 -13.41220 -13.37849 -13.32243 -13.06670 -12.96678 -12.84849 -12.58348 -12.28545 -12.17389 -12.09430 -11.86611 -11.76080 -11.63144 -11.41197 -11.33848 -10.93643 -10.62734 -10.35010 -10.24683 -9.91785 -9.04068 0.07559 0.21749 1.14978 1.24268 1.43988 1.50280 1.52451 1.81453 1.83710 1.91105 2.18089 2.44795 2.50745 3.39515 3.62936 3.70184 3.75358 3.94031 3.96198 4.01601 4.07177 4.27986 4.36508 4.45379 4.47129 4.50114 4.55470 4.57053 4.63898 4.64497 4.64748 4.67504 4.68827 4.70248 4.71850 5.00466 5.03725 5.06177 5.08872 5.14149 5.31035 5.33143 5.36733 5.41650 5.46549 5.48281 5.55347 6.36292 6.66921 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.124 4.124 2 C -0.026 4.026 3 C -0.203 4.203 4 C 0.171 3.829 5 O -0.298 6.298 6 C 0.061 3.939 7 C -0.078 4.078 8 C -0.112 4.112 9 C -0.396 4.396 10 Si 0.967 3.033 11 C -0.442 4.442 12 C -0.442 4.442 13 C -0.395 4.395 14 C -0.106 4.106 15 C -0.065 4.065 16 O -0.539 6.539 17 Si 0.934 3.066 18 H -0.246 1.246 19 H -0.245 1.245 20 H -0.252 1.252 21 C -0.071 4.071 22 C -0.074 4.074 23 Cl -0.064 7.064 24 H 0.080 0.920 25 H 0.078 0.922 26 H 0.073 0.927 27 H 0.140 0.860 28 H 0.064 0.936 29 H 0.064 0.936 30 H 0.082 0.918 31 H 0.062 0.938 32 H 0.074 0.926 33 H 0.077 0.923 34 H 0.077 0.923 35 H 0.069 0.931 36 H 0.070 0.930 37 H 0.070 0.930 38 H 0.070 0.930 39 H 0.070 0.930 40 H 0.069 0.931 41 H 0.082 0.918 42 H 0.080 0.920 43 H 0.078 0.922 44 H 0.378 0.622 45 H 0.139 0.861 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.238 3.581 0.934 3.709 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.180 4.180 2 C -0.027 4.027 3 C -0.221 4.221 4 C 0.124 3.876 5 O -0.210 6.210 6 C -0.014 4.014 7 C -0.096 4.096 8 C -0.149 4.149 9 C -0.483 4.483 10 Si 1.165 2.835 11 C -0.551 4.551 12 C -0.550 4.550 13 C -0.481 4.481 14 C -0.107 4.107 15 C -0.176 4.176 16 O -0.345 6.345 17 Si 0.757 3.243 18 H -0.169 1.169 19 H -0.169 1.169 20 H -0.176 1.176 21 C -0.089 4.089 22 C -0.100 4.100 23 Cl -0.035 7.035 24 H 0.099 0.901 25 H 0.097 0.903 26 H 0.092 0.908 27 H 0.157 0.843 28 H 0.082 0.918 29 H 0.082 0.918 30 H 0.100 0.900 31 H 0.081 0.919 32 H 0.093 0.907 33 H 0.096 0.904 34 H 0.096 0.904 35 H 0.088 0.912 36 H 0.089 0.911 37 H 0.090 0.910 38 H 0.089 0.911 39 H 0.089 0.911 40 H 0.088 0.912 41 H 0.101 0.899 42 H 0.098 0.902 43 H 0.096 0.904 44 H 0.225 0.775 45 H 0.156 0.844 Dipole moment (debyes) X Y Z Total from point charges 0.008 2.740 1.041 2.931 hybrid contribution 0.054 0.164 0.007 0.173 sum 0.062 2.904 1.048 3.088 Atomic orbital electron populations 1.20945 0.89774 1.03874 1.03409 1.19587 0.96841 0.90644 0.95646 1.21105 0.92716 0.98660 1.09664 1.18728 0.89916 0.85925 0.93048 1.86155 1.35577 1.11920 1.87387 1.23147 0.94463 0.82332 1.01491 1.21508 0.96710 0.91860 0.99560 1.21909 0.98985 0.98108 0.95907 1.26665 1.08694 1.06731 1.06198 0.80513 0.68177 0.67324 0.67535 1.26017 1.06881 1.11975 1.10191 1.26013 1.08974 1.07251 1.12794 1.26675 1.05804 1.06967 1.08629 1.18429 0.94135 0.90132 1.08020 1.24463 0.93149 1.10742 0.89219 1.86529 1.26485 1.92895 1.28594 0.85956 0.80462 0.76634 0.81288 1.16933 1.16911 1.17592 1.20776 0.92455 0.97744 0.97929 1.20481 0.91808 0.87142 1.10614 1.98366 1.76468 1.31603 1.97112 0.90098 0.90317 0.90824 0.84270 0.91815 0.91766 0.89960 0.91886 0.90711 0.90383 0.90388 0.91227 0.91082 0.91037 0.91075 0.91077 0.91157 0.89931 0.90153 0.90405 0.77492 0.84368 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 0.04 9.61 36.01 0.35 0.38 16 2 C -0.03 -0.05 5.88 -104.61 -0.62 -0.66 16 3 C -0.20 -0.30 8.69 -39.44 -0.34 -0.64 16 4 C 0.17 0.45 6.66 -39.22 -0.26 0.19 16 5 O -0.30 -0.64 9.23 -19.48 -0.18 -0.82 16 6 C 0.06 -0.01 3.98 37.16 0.15 0.13 16 7 C -0.08 0.08 2.58 -89.07 -0.23 -0.15 16 8 C -0.11 0.05 5.06 -24.87 -0.13 -0.08 16 9 C -0.40 0.58 5.95 38.72 0.23 0.81 16 10 Si 0.97 -2.96 13.35 -169.99 -2.27 -5.23 16 11 C -0.44 0.89 8.65 101.05 0.87 1.77 16 12 C -0.44 0.87 8.65 101.05 0.87 1.75 16 13 C -0.40 0.94 5.28 38.41 0.20 1.14 16 14 C -0.11 -0.30 5.31 -104.48 -0.55 -0.85 16 15 C -0.07 -0.07 2.37 36.00 0.09 0.01 16 16 O -0.54 -0.79 12.86 -35.23 -0.45 -1.24 16 17 Si 0.93 0.37 25.48 -169.99 -4.33 -3.96 16 18 H -0.25 -0.25 7.11 56.52 0.40 0.15 16 19 H -0.25 -0.35 6.74 56.52 0.38 0.03 16 20 H -0.25 -0.05 7.11 56.52 0.40 0.35 16 21 C -0.07 -0.20 8.44 -39.57 -0.33 -0.53 16 22 C -0.07 -0.20 6.31 -39.49 -0.25 -0.45 16 23 Cl -0.06 -0.15 27.29 -51.86 -1.42 -1.57 16 24 H 0.08 -0.06 8.14 -51.93 -0.42 -0.49 16 25 H 0.08 -0.01 6.90 -51.93 -0.36 -0.37 16 26 H 0.07 -0.12 8.08 -51.93 -0.42 -0.54 16 27 H 0.14 -0.09 6.30 -52.49 -0.33 -0.42 16 28 H 0.06 -0.07 7.65 -51.92 -0.40 -0.47 16 29 H 0.06 -0.05 7.60 -51.93 -0.39 -0.44 16 30 H 0.08 -0.05 8.14 -51.93 -0.42 -0.48 16 31 H 0.06 -0.03 8.05 -51.93 -0.42 -0.44 16 32 H 0.07 0.07 8.11 -51.93 -0.42 -0.35 16 33 H 0.08 -0.11 8.06 -51.93 -0.42 -0.53 16 34 H 0.08 -0.10 8.06 -51.93 -0.42 -0.52 16 35 H 0.07 -0.14 7.96 -51.93 -0.41 -0.55 16 36 H 0.07 -0.13 7.96 -51.93 -0.41 -0.54 16 37 H 0.07 -0.13 7.96 -51.93 -0.41 -0.55 16 38 H 0.07 -0.13 7.96 -51.93 -0.41 -0.54 16 39 H 0.07 -0.12 7.96 -51.93 -0.41 -0.54 16 40 H 0.07 -0.14 7.96 -51.93 -0.41 -0.55 16 41 H 0.08 -0.22 8.04 -51.93 -0.42 -0.63 16 42 H 0.08 -0.22 7.85 -51.93 -0.41 -0.63 16 43 H 0.08 0.01 7.83 -51.93 -0.41 -0.40 16 44 H 0.38 -1.11 8.74 45.56 0.40 -0.71 16 45 H 0.14 0.25 4.89 -52.49 -0.26 -0.01 16 LS Contribution 372.78 15.07 5.62 5.62 Total: 0.00 -4.74 372.78 -9.79 -14.53 By element: Atomic # 1 Polarization: -3.35 SS G_CDS: -6.81 Total: -10.15 kcal Atomic # 6 Polarization: 2.77 SS G_CDS: 0.05 Total: 2.82 kcal Atomic # 8 Polarization: -1.43 SS G_CDS: -0.63 Total: -2.06 kcal Atomic # 14 Polarization: -2.59 SS G_CDS: -6.60 Total: -9.19 kcal Atomic # 17 Polarization: -0.15 SS G_CDS: -1.42 Total: -1.57 kcal Total LS contribution 5.62 Total: 5.62 kcal Total: -4.74 -9.79 -14.53 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_7_12058104_18051908.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -95.657 kcal (2) G-P(sol) polarization free energy of solvation -4.738 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -100.395 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.791 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -14.529 kcal (6) G-S(sol) free energy of system = (1) + (5) -110.186 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.48 seconds