Wall clock time and date at job start Tue Mar 9 2021 14:00:39 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 Si 1.86301 * 1 3 3 C 1.86297 * 111.24221 * 2 1 4 4 C 1.89333 * 111.45813 * 125.06702 * 2 1 3 5 5 C 1.55147 * 101.34989 * 114.13512 * 4 2 1 6 6 C 1.53566 * 111.29010 * 28.58791 * 5 4 2 7 7 C 1.52995 * 109.47643 * 190.93802 * 6 5 4 8 8 O 1.42901 * 109.47074 * 293.54788 * 7 6 5 9 9 C 1.35900 * 117.00200 * 179.97438 * 8 7 6 10 10 C 1.38689 * 120.04731 * 359.72762 * 9 8 7 11 11 C 1.38282 * 119.92828 * 179.72727 * 10 9 8 12 12 Cl 1.73606 * 119.98397 * 180.24960 * 11 10 9 13 13 C 1.38367 * 120.03276 * 0.54104 * 11 10 9 14 14 C 1.38269 * 120.09382 * 359.73096 * 13 11 10 15 15 C 1.38123 * 120.06969 * 359.97438 * 14 13 11 16 16 C 1.50703 * 120.01555 * 179.97438 * 15 14 13 17 17 O 1.42905 * 109.47204 * 105.01923 * 16 15 14 18 18 Si 1.86293 * 109.46956 * 345.02010 * 16 15 14 19 19 H 1.48502 * 109.47326 * 60.00106 * 18 16 15 20 20 H 1.48500 * 109.47226 * 180.02562 * 18 16 15 21 21 H 1.48500 * 109.47518 * 300.00115 * 18 16 15 22 22 C 1.56066 * 109.55501 * 311.00476 * 6 5 4 23 23 H 1.09002 * 109.47148 * 59.99975 * 1 2 3 24 24 H 1.09001 * 109.46900 * 300.00128 * 1 2 3 25 25 H 1.09004 * 109.47198 * 180.02562 * 1 2 3 26 26 H 1.08995 * 109.47233 * 59.99762 * 3 2 1 27 27 H 1.08997 * 109.47080 * 180.02562 * 3 2 1 28 28 H 1.08998 * 109.47258 * 299.99719 * 3 2 1 29 29 H 1.09002 * 111.04844 * 232.15327 * 4 2 1 30 30 H 1.08999 * 111.05229 * 356.11516 * 4 2 1 31 31 H 1.09003 * 109.12221 * 149.06655 * 5 4 2 32 32 H 1.08996 * 109.12795 * 268.10531 * 5 4 2 33 33 H 1.09004 * 109.47418 * 70.93608 * 6 5 4 34 34 H 1.09007 * 109.46916 * 53.54343 * 7 6 5 35 35 H 1.09005 * 109.47687 * 173.54545 * 7 6 5 36 36 H 1.08001 * 120.03511 * 359.97438 * 10 9 8 37 37 H 1.07996 * 119.94913 * 179.70543 * 13 11 10 38 38 H 1.08000 * 119.96034 * 179.97438 * 14 13 11 39 39 H 1.08997 * 109.47400 * 225.01717 * 16 15 14 40 40 H 0.96699 * 113.99879 * 300.00478 * 17 16 15 41 41 H 1.08996 * 111.41269 * 283.05303 * 22 6 5 42 42 H 1.09006 * 111.49251 * 158.06559 * 22 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 14 1.8630 0.0000 0.0000 3 6 2.5380 1.7364 0.0000 4 6 2.5556 -1.0124 1.4422 5 6 3.2462 -2.1811 0.6911 6 6 3.7193 -1.7454 -0.7034 7 6 4.1417 -2.9771 -1.5067 8 8 5.3027 -3.5593 -0.9107 9 6 5.8104 -4.6706 -1.5059 10 6 5.2004 -5.1929 -2.6366 11 6 5.7225 -6.3205 -3.2436 12 17 4.9638 -6.9718 -4.6628 13 6 6.8456 -6.9333 -2.7168 14 6 7.4514 -6.4168 -1.5863 15 6 6.9370 -5.2873 -0.9803 16 6 7.5978 -4.7257 0.2522 17 8 8.3275 -3.5467 -0.0938 18 14 8.7648 -5.9921 0.9627 19 1 9.8021 -6.3298 -0.0449 20 1 9.4156 -5.4390 2.1775 21 1 8.0067 -7.2173 1.3223 22 6 2.5568 -1.0142 -1.4447 23 1 -0.3633 0.5138 -0.8900 24 1 -0.3633 0.5139 0.8900 25 1 -0.3634 -1.0277 0.0005 26 1 2.1907 2.2612 0.8899 27 1 3.6274 1.7027 -0.0005 28 1 2.1908 2.2612 -0.8900 29 1 3.2797 -0.4330 2.0151 30 1 1.7543 -1.3786 2.0840 31 1 4.1055 -2.5196 1.2701 32 1 2.5407 -3.0054 0.5873 33 1 4.5675 -1.0680 -0.6042 34 1 3.3305 -3.7052 -1.5088 35 1 4.3683 -2.6826 -2.5315 36 1 4.3210 -4.7173 -3.0450 37 1 7.2493 -7.8166 -3.1892 38 1 8.3277 -6.8972 -1.1767 39 1 6.8365 -4.4777 0.9917 40 1 9.0233 -3.6929 -0.7493 41 1 1.8198 -1.7216 -1.8246 42 1 2.9328 -0.3696 -2.2393 RHF calculation, no. of doubly occupied orbitals= 53 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV m_7_13616168_18051908.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 14:00:39 Heat of formation + Delta-G solvation = -106.585297 kcal Electronic energy + Delta-G solvation = -22045.432023 eV Core-core repulsion = 18753.338482 eV Total energy + Delta-G solvation = -3292.093541 eV No. of doubly occupied orbitals = 53 Molecular weight (most abundant/longest-lived isotopes) = 314.102 amu Computer time = 1.53 seconds Orbital eigenvalues (eV) -41.50532 -39.15514 -37.93109 -37.13281 -36.57235 -32.59562 -31.38705 -30.49988 -29.26679 -28.54006 -27.39145 -26.63194 -24.39557 -23.33093 -22.61286 -20.75992 -19.48035 -18.23180 -17.36387 -17.16721 -16.77934 -16.30020 -16.06892 -15.61048 -15.35448 -15.20717 -14.90971 -14.54943 -14.21255 -14.04293 -13.99547 -13.92796 -13.61061 -13.54566 -13.41951 -13.33061 -12.92590 -12.87332 -12.52559 -12.29684 -12.20802 -12.13628 -11.97727 -11.92969 -11.65818 -11.57356 -11.40203 -10.91875 -10.60465 -10.38568 -10.36081 -9.98005 -9.26547 -0.07165 0.23380 1.04863 1.14116 1.38726 1.50877 1.52829 1.82333 1.84605 1.90291 2.14825 2.43837 2.51194 3.50397 3.58073 3.71868 3.75592 3.89729 3.97734 4.00865 4.06378 4.27507 4.35847 4.43717 4.48414 4.52492 4.61191 4.65793 4.66670 4.69029 4.70992 4.71528 4.74261 4.94894 5.03758 5.10626 5.11357 5.15831 5.31756 5.37356 5.40897 5.46616 5.48988 5.51421 6.31441 6.61093 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.442 4.442 2 Si 0.969 3.031 3 C -0.442 4.442 4 C -0.398 4.398 5 C -0.109 4.109 6 C -0.082 4.082 7 C 0.062 3.938 8 O -0.294 6.294 9 C 0.174 3.826 10 C -0.206 4.206 11 C 0.011 3.989 12 Cl -0.062 7.062 13 C -0.145 4.145 14 C -0.077 4.077 15 C -0.152 4.152 16 C -0.068 4.068 17 O -0.532 6.532 18 Si 0.946 3.054 19 H -0.251 1.251 20 H -0.251 1.251 21 H -0.248 1.248 22 C -0.394 4.394 23 H 0.069 0.931 24 H 0.070 0.930 25 H 0.070 0.930 26 H 0.070 0.930 27 H 0.071 0.929 28 H 0.069 0.931 29 H 0.077 0.923 30 H 0.077 0.923 31 H 0.070 0.930 32 H 0.060 0.940 33 H 0.086 0.914 34 H 0.064 0.936 35 H 0.065 0.935 36 H 0.141 0.859 37 H 0.139 0.861 38 H 0.139 0.861 39 H 0.118 0.882 40 H 0.373 0.627 41 H 0.081 0.919 42 H 0.082 0.918 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.726 0.600 0.127 0.950 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.550 4.550 2 Si 1.166 2.834 3 C -0.551 4.551 4 C -0.485 4.485 5 C -0.147 4.147 6 C -0.100 4.100 7 C -0.013 4.013 8 O -0.207 6.207 9 C 0.127 3.873 10 C -0.225 4.225 11 C -0.015 4.015 12 Cl -0.033 7.033 13 C -0.164 4.164 14 C -0.095 4.095 15 C -0.154 4.154 16 C -0.179 4.179 17 O -0.336 6.336 18 Si 0.768 3.232 19 H -0.175 1.175 20 H -0.175 1.175 21 H -0.171 1.171 22 C -0.480 4.480 23 H 0.089 0.911 24 H 0.089 0.911 25 H 0.089 0.911 26 H 0.089 0.911 27 H 0.090 0.910 28 H 0.088 0.912 29 H 0.095 0.905 30 H 0.096 0.904 31 H 0.088 0.912 32 H 0.079 0.921 33 H 0.104 0.896 34 H 0.082 0.918 35 H 0.083 0.917 36 H 0.159 0.841 37 H 0.157 0.843 38 H 0.156 0.844 39 H 0.136 0.864 40 H 0.219 0.781 41 H 0.100 0.900 42 H 0.100 0.900 Dipole moment (debyes) X Y Z Total from point charges -0.610 0.343 0.959 1.187 hybrid contribution -0.177 -0.232 -1.102 1.140 sum -0.787 0.111 -0.144 0.807 Atomic orbital electron populations 1.26016 1.19950 1.04576 1.04507 0.80494 0.67389 0.67597 0.67900 1.26015 1.06725 1.17826 1.04515 1.26504 1.05516 1.06329 1.10123 1.21709 1.00657 0.98129 0.94183 1.21687 0.98721 0.95009 0.94590 1.23096 0.85726 0.95201 0.97264 1.86199 1.43860 1.38331 1.52300 1.18554 0.91799 0.86495 0.90410 1.21174 1.03865 0.99022 0.98434 1.20715 0.95202 0.95260 0.90369 1.98403 1.81125 1.85475 1.38253 1.20913 0.95964 1.01908 0.97628 1.20933 0.99199 0.94510 0.94822 1.19771 0.97092 0.97742 1.00748 1.24828 1.00636 0.95505 0.96885 1.86575 1.51115 1.31706 1.64218 0.85788 0.79094 0.77619 0.80682 1.17474 1.17451 1.17129 1.26840 1.02664 1.07840 1.10611 0.91149 0.91112 0.91070 0.91057 0.90980 0.91174 0.90453 0.90367 0.91172 0.92083 0.89560 0.91778 0.91691 0.84127 0.84320 0.84395 0.86390 0.78082 0.89995 0.89964 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.44 0.82 8.65 101.05 0.87 1.69 16 2 Si 0.97 -2.73 13.35 -169.99 -2.27 -5.00 16 3 C -0.44 0.74 8.65 101.05 0.87 1.61 16 4 C -0.40 0.51 5.85 38.29 0.22 0.73 16 5 C -0.11 0.04 5.21 -25.30 -0.13 -0.09 16 6 C -0.08 0.06 2.40 -88.69 -0.21 -0.16 16 7 C 0.06 0.00 4.11 37.15 0.15 0.15 16 8 O -0.29 -0.56 9.25 -19.42 -0.18 -0.74 16 9 C 0.17 0.31 6.66 -39.22 -0.26 0.05 16 10 C -0.21 -0.27 8.82 -39.40 -0.35 -0.61 16 11 C 0.01 0.02 6.32 -39.52 -0.25 -0.23 16 12 Cl -0.06 -0.09 28.95 -51.86 -1.50 -1.59 16 13 C -0.15 -0.07 9.83 -39.52 -0.39 -0.46 16 14 C -0.08 -0.01 8.65 -39.61 -0.34 -0.35 16 15 C -0.15 -0.16 5.27 -104.47 -0.55 -0.71 16 16 C -0.07 -0.03 2.38 36.01 0.09 0.06 16 17 O -0.53 -0.59 12.88 -35.23 -0.45 -1.04 16 18 Si 0.95 -0.53 25.49 -169.99 -4.33 -4.86 16 19 H -0.25 0.26 6.73 56.52 0.38 0.65 16 20 H -0.25 -0.23 7.11 56.52 0.40 0.17 16 21 H -0.25 -0.01 7.11 56.52 0.40 0.39 16 22 C -0.39 0.82 5.30 38.80 0.21 1.02 16 23 H 0.07 -0.13 7.96 -51.93 -0.41 -0.54 16 24 H 0.07 -0.12 7.96 -51.93 -0.41 -0.53 16 25 H 0.07 -0.12 7.96 -51.93 -0.41 -0.53 16 26 H 0.07 -0.11 7.96 -51.93 -0.41 -0.52 16 27 H 0.07 -0.10 7.96 -51.93 -0.41 -0.51 16 28 H 0.07 -0.12 7.96 -51.93 -0.41 -0.53 16 29 H 0.08 -0.08 8.04 -51.93 -0.42 -0.49 16 30 H 0.08 -0.10 8.04 -51.93 -0.42 -0.52 16 31 H 0.07 0.06 8.12 -51.93 -0.42 -0.37 16 32 H 0.06 -0.03 8.04 -51.93 -0.42 -0.45 16 33 H 0.09 -0.02 8.14 -51.93 -0.42 -0.44 16 34 H 0.06 -0.05 7.58 -51.93 -0.39 -0.45 16 35 H 0.06 -0.04 7.68 -51.93 -0.40 -0.44 16 36 H 0.14 0.01 6.30 -52.49 -0.33 -0.32 16 37 H 0.14 -0.15 8.06 -52.49 -0.42 -0.58 16 38 H 0.14 -0.23 4.89 -52.49 -0.26 -0.48 16 39 H 0.12 0.06 7.83 -51.93 -0.41 -0.35 16 40 H 0.37 -0.85 8.70 45.56 0.40 -0.45 16 41 H 0.08 -0.19 8.03 -51.93 -0.42 -0.61 16 42 H 0.08 -0.19 8.06 -51.93 -0.42 -0.61 16 LS Contribution 354.24 15.07 5.34 5.34 Total: 0.00 -4.21 354.24 -9.51 -13.72 By element: Atomic # 1 Polarization: -2.49 SS G_CDS: -6.04 Total: -8.53 kcal Atomic # 6 Polarization: 2.78 SS G_CDS: -0.07 Total: 2.71 kcal Atomic # 8 Polarization: -1.15 SS G_CDS: -0.63 Total: -1.78 kcal Atomic # 14 Polarization: -3.26 SS G_CDS: -6.60 Total: -9.86 kcal Atomic # 17 Polarization: -0.09 SS G_CDS: -1.50 Total: -1.59 kcal Total LS contribution 5.34 Total: 5.34 kcal Total: -4.21 -9.51 -13.72 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_7_13616168_18051908.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -92.865 kcal (2) G-P(sol) polarization free energy of solvation -4.210 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -97.075 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.510 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -13.720 kcal (6) G-S(sol) free energy of system = (1) + (5) -106.585 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.53 seconds