Wall clock time and date at job start Tue Mar 9 2021 14:00:57 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53000 * 1 3 3 C 1.53002 * 109.47138 * 2 1 4 4 C 1.50699 * 109.47447 * 120.00018 * 2 1 3 5 5 C 1.38242 * 119.94354 * 300.02377 * 4 2 1 6 6 C 1.38166 * 120.05422 * 179.74038 * 5 4 2 7 7 C 1.38716 * 119.94490 * 0.53478 * 6 5 4 8 8 O 1.35900 * 120.05639 * 179.71962 * 7 6 5 9 9 C 1.42901 * 117.00200 * 359.72293 * 8 7 6 10 10 C 1.52995 * 109.47074 * 179.97438 * 9 8 7 11 11 C 1.53566 * 109.47643 * 293.54788 * 10 9 8 12 12 C 1.55147 * 111.29010 * 190.93802 * 11 10 9 13 13 Si 1.89333 * 101.34989 * 28.58791 * 12 11 10 14 14 C 1.86301 * 111.45813 * 114.13512 * 13 12 11 15 15 C 1.86297 * 111.45926 * 239.08100 * 13 12 11 16 16 C 1.56066 * 109.48114 * 173.43596 * 10 9 8 17 17 C 1.38751 * 119.88265 * 359.44621 * 7 6 5 18 18 C 1.50705 * 120.02621 * 180.25528 * 17 7 6 19 19 O 1.42903 * 109.46971 * 285.00081 * 18 17 7 20 20 Si 1.86294 * 109.47492 * 164.99907 * 18 17 7 21 21 H 1.48497 * 109.47021 * 59.99755 * 20 18 17 22 22 H 1.48496 * 109.47263 * 180.02562 * 20 18 17 23 23 H 1.48501 * 109.46959 * 300.00270 * 20 18 17 24 24 C 1.38122 * 119.94922 * 0.27391 * 17 7 6 25 25 H 1.08999 * 109.46651 * 299.99500 * 1 2 3 26 26 H 1.09001 * 109.47015 * 60.00108 * 1 2 3 27 27 H 1.09000 * 109.46954 * 179.97438 * 1 2 3 28 28 H 1.09004 * 109.47107 * 240.00562 * 2 1 3 29 29 H 1.09001 * 109.47001 * 59.99898 * 3 2 1 30 30 H 1.08997 * 109.47577 * 180.02562 * 3 2 1 31 31 H 1.09002 * 109.47329 * 300.00595 * 3 2 1 32 32 H 1.07999 * 119.97576 * 359.97438 * 5 4 2 33 33 H 1.08004 * 120.02918 * 180.25095 * 6 5 4 34 34 H 1.09007 * 109.46885 * 60.00180 * 9 8 7 35 35 H 1.09005 * 109.47062 * 300.00380 * 9 8 7 36 36 H 1.09004 * 109.46872 * 53.55317 * 10 9 8 37 37 H 1.09003 * 109.12206 * 70.45930 * 11 10 9 38 38 H 1.08996 * 109.12221 * 311.42400 * 11 10 9 39 39 H 1.09002 * 111.04815 * 270.56954 * 12 11 10 40 40 H 1.08999 * 111.04827 * 146.61077 * 12 11 10 41 41 H 1.09002 * 109.47148 * 185.06678 * 14 13 12 42 42 H 1.09001 * 109.46900 * 65.06830 * 14 13 12 43 43 H 1.09004 * 109.47198 * 305.06808 * 14 13 12 44 44 H 1.08995 * 109.47233 * 294.93123 * 15 13 12 45 45 H 1.08997 * 109.47080 * 54.93469 * 15 13 12 46 46 H 1.08998 * 109.47258 * 174.93080 * 15 13 12 47 47 H 1.08996 * 111.41269 * 43.11689 * 16 10 9 48 48 H 1.09006 * 111.49251 * 278.12945 * 16 10 9 49 49 H 1.09003 * 109.46738 * 44.99742 * 18 17 7 50 50 H 0.96704 * 114.00342 * 59.99888 * 19 18 17 51 51 H 1.07997 * 119.97122 * 180.02562 * 24 17 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 6 2.0324 -0.7104 1.2304 5 6 1.6974 -0.2374 2.4855 6 6 2.1523 -0.8900 3.6151 7 6 2.9550 -2.0143 3.4892 8 8 3.4084 -2.6547 4.5988 9 6 3.0245 -2.1117 5.8636 10 6 3.6246 -2.9604 6.9862 11 6 2.9868 -4.3573 6.9689 12 6 3.3558 -5.1609 8.2438 13 14 3.6040 -3.7688 9.5029 14 6 2.3158 -3.8283 10.8474 15 6 5.3251 -3.7933 10.2155 16 6 3.3468 -2.2764 8.3612 17 6 3.2895 -2.4872 2.2283 18 6 4.1566 -3.7118 2.0878 19 8 5.5116 -3.3732 2.3902 20 14 4.0511 -4.3503 0.3409 21 1 4.5206 -3.3008 -0.5990 22 1 4.9051 -5.5573 0.2026 23 1 2.6430 -4.7021 0.0266 24 6 2.8274 -1.8346 1.1021 25 1 -0.3632 0.5138 0.8900 26 1 -0.3633 0.5138 -0.8900 27 1 -0.3633 -1.0277 -0.0005 28 1 1.8933 -0.5138 -0.8901 29 1 1.6766 1.9563 0.8900 30 1 3.1300 1.4426 -0.0005 31 1 1.6766 1.9564 -0.8899 32 1 1.0764 0.6408 2.5831 33 1 1.8870 -0.5225 4.5954 34 1 1.9376 -2.1166 5.9462 35 1 3.3906 -1.0883 5.9459 36 1 4.7008 -3.0505 6.8380 37 1 3.3381 -4.8994 6.0910 38 1 1.9032 -4.2543 6.9128 39 1 4.2767 -5.7255 8.0977 40 1 2.5390 -5.8179 8.5424 41 1 2.4331 -2.9643 11.5015 42 1 2.4384 -4.7428 11.4278 43 1 1.3221 -3.8127 10.3996 44 1 5.4667 -4.7075 10.7919 45 1 6.0541 -3.7576 9.4060 46 1 5.4615 -2.9291 10.8656 47 1 2.3251 -1.9015 8.4200 48 1 4.0702 -1.4875 8.5682 49 1 3.8120 -4.4821 2.7777 50 1 5.6415 -3.0328 3.2860 51 1 3.0871 -2.2026 0.1206 RHF calculation, no. of doubly occupied orbitals= 59 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV m_7_13942222_18051908.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 14:00:57 Heat of formation + Delta-G solvation = -119.566206 kcal Electronic energy + Delta-G solvation = -25786.008868 eV Core-core repulsion = 22386.539368 eV Total energy + Delta-G solvation = -3399.469500 eV No. of doubly occupied orbitals = 59 Molecular weight (most abundant/longest-lived isotopes) = 322.188 amu Computer time = 0.67 seconds Orbital eigenvalues (eV) -41.49488 -39.38511 -37.74273 -36.81652 -35.45469 -32.56553 -30.91942 -29.98353 -29.28903 -28.56633 -28.03969 -27.35956 -26.52420 -24.37449 -23.70291 -22.94613 -20.83505 -20.56693 -19.20227 -18.03582 -17.57093 -17.01353 -16.45874 -16.00770 -15.87870 -15.52297 -15.44780 -15.25663 -14.81724 -14.50457 -14.35840 -14.12968 -14.08101 -14.01598 -13.97507 -13.61848 -13.59553 -13.53067 -13.36089 -13.24997 -13.02769 -12.82764 -12.63687 -12.33774 -12.21064 -12.13598 -11.95056 -11.91009 -11.76254 -11.62376 -11.56982 -11.43258 -11.01357 -10.94696 -10.84857 -10.62918 -10.41183 -9.87756 -8.97981 0.30403 0.44759 1.31593 1.50240 1.59736 1.64340 1.79395 1.81802 2.06848 2.20170 2.48783 2.71168 3.61476 3.69275 3.73414 3.81356 3.90233 3.99265 4.06833 4.10897 4.18452 4.28343 4.31101 4.37449 4.43382 4.48487 4.50440 4.52887 4.60563 4.63420 4.64072 4.66915 4.68161 4.69262 4.72578 4.74096 4.84030 4.92949 5.00048 5.06705 5.07488 5.08422 5.25045 5.27889 5.32977 5.34943 5.37043 5.38667 5.40295 5.44995 5.46301 5.69161 5.80083 6.43262 6.71518 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.145 4.145 2 C -0.056 4.056 3 C -0.145 4.145 4 C -0.106 4.106 5 C -0.070 4.070 6 C -0.203 4.203 7 C 0.140 3.860 8 O -0.314 6.314 9 C 0.067 3.933 10 C -0.082 4.082 11 C -0.109 4.109 12 C -0.399 4.399 13 Si 0.969 3.031 14 C -0.443 4.443 15 C -0.442 4.442 16 C -0.394 4.394 17 C -0.143 4.143 18 C -0.081 4.081 19 O -0.538 6.538 20 Si 1.013 2.987 21 H -0.252 1.252 22 H -0.257 1.257 23 H -0.249 1.249 24 C -0.083 4.083 25 H 0.056 0.944 26 H 0.059 0.941 27 H 0.056 0.944 28 H 0.078 0.922 29 H 0.056 0.944 30 H 0.057 0.943 31 H 0.059 0.941 32 H 0.126 0.874 33 H 0.129 0.871 34 H 0.063 0.937 35 H 0.063 0.937 36 H 0.084 0.916 37 H 0.068 0.932 38 H 0.060 0.940 39 H 0.076 0.924 40 H 0.077 0.923 41 H 0.069 0.931 42 H 0.070 0.930 43 H 0.070 0.930 44 H 0.070 0.930 45 H 0.071 0.929 46 H 0.069 0.931 47 H 0.081 0.919 48 H 0.081 0.919 49 H 0.075 0.925 50 H 0.368 0.632 51 H 0.129 0.871 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.943 1.171 2.589 3.442 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.202 4.202 2 C -0.074 4.074 3 C -0.202 4.202 4 C -0.107 4.107 5 C -0.088 4.088 6 C -0.222 4.222 7 C 0.094 3.906 8 O -0.228 6.228 9 C -0.008 4.008 10 C -0.101 4.101 11 C -0.146 4.146 12 C -0.485 4.485 13 Si 1.167 2.833 14 C -0.551 4.551 15 C -0.551 4.551 16 C -0.479 4.479 17 C -0.144 4.144 18 C -0.189 4.189 19 O -0.344 6.344 20 Si 0.833 3.167 21 H -0.176 1.176 22 H -0.181 1.181 23 H -0.173 1.173 24 C -0.101 4.101 25 H 0.075 0.925 26 H 0.078 0.922 27 H 0.076 0.924 28 H 0.096 0.904 29 H 0.075 0.925 30 H 0.076 0.924 31 H 0.078 0.922 32 H 0.144 0.856 33 H 0.147 0.853 34 H 0.081 0.919 35 H 0.082 0.918 36 H 0.103 0.897 37 H 0.087 0.913 38 H 0.079 0.921 39 H 0.095 0.905 40 H 0.096 0.904 41 H 0.089 0.911 42 H 0.089 0.911 43 H 0.089 0.911 44 H 0.090 0.910 45 H 0.090 0.910 46 H 0.088 0.912 47 H 0.100 0.900 48 H 0.100 0.900 49 H 0.093 0.907 50 H 0.216 0.784 51 H 0.146 0.854 Dipole moment (debyes) X Y Z Total from point charges -1.776 0.491 1.214 2.207 hybrid contribution -0.297 0.738 1.233 1.467 sum -2.073 1.230 2.447 3.435 Atomic orbital electron populations 1.21876 0.94175 1.02126 1.02072 1.20106 0.96048 0.96126 0.95130 1.21870 1.01365 0.94955 1.02042 1.19726 0.99561 0.96414 0.94965 1.20800 0.97957 0.98787 0.91247 1.21256 1.03153 0.97838 0.99917 1.18739 0.93891 0.91634 0.86330 1.86027 1.70678 1.53173 1.12947 1.23004 0.99656 0.97564 0.80551 1.21695 1.01327 0.94546 0.92511 1.21706 1.00486 0.93878 0.98574 1.26510 1.04493 1.09243 1.08265 0.80488 0.67630 0.67827 0.67392 1.26018 1.11929 1.04539 1.12593 1.26017 1.17682 1.04547 1.06835 1.26831 1.04650 1.11588 1.04852 1.19579 1.03683 1.00550 0.90615 1.25167 0.83287 0.96114 1.14340 1.86673 1.24021 1.86862 1.36834 0.84491 0.80259 0.79497 0.72443 1.17628 1.18071 1.17257 1.20859 0.96700 0.95009 0.97499 0.92467 0.92180 0.92449 0.90386 0.92484 0.92423 0.92192 0.85637 0.85303 0.91924 0.91841 0.89746 0.91282 0.92072 0.90479 0.90364 0.91145 0.91101 0.91075 0.91048 0.91011 0.91161 0.90007 0.89978 0.90688 0.78396 0.85365 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.07 9.01 37.16 0.33 0.40 16 2 C -0.06 -0.01 3.09 -91.77 -0.28 -0.29 16 3 C -0.15 0.04 9.01 37.16 0.33 0.38 16 4 C -0.11 -0.16 4.78 -104.60 -0.50 -0.66 16 5 C -0.07 -0.07 8.70 -39.61 -0.34 -0.42 16 6 C -0.20 -0.26 9.04 -39.43 -0.36 -0.61 16 7 C 0.14 0.31 6.62 -39.22 -0.26 0.05 16 8 O -0.31 -0.44 8.83 -19.42 -0.17 -0.61 16 9 C 0.07 -0.04 4.11 37.15 0.15 0.12 16 10 C -0.08 0.11 2.40 -88.69 -0.21 -0.11 16 11 C -0.11 0.08 5.21 -25.30 -0.13 -0.05 16 12 C -0.40 0.62 5.85 38.29 0.22 0.85 16 13 Si 0.97 -3.04 13.35 -169.99 -2.27 -5.31 16 14 C -0.44 0.91 8.65 101.05 0.87 1.78 16 15 C -0.44 0.88 8.65 101.05 0.87 1.75 16 16 C -0.39 0.98 5.30 38.80 0.21 1.18 16 17 C -0.14 -0.37 5.28 -104.47 -0.55 -0.93 16 18 C -0.08 -0.17 2.33 36.01 0.08 -0.09 16 19 O -0.54 -1.60 12.65 -35.23 -0.45 -2.04 16 20 Si 1.01 1.72 25.75 -169.99 -4.38 -2.66 16 21 H -0.25 -0.54 6.73 56.52 0.38 -0.16 16 22 H -0.26 -0.67 7.11 56.52 0.40 -0.26 16 23 H -0.25 -0.31 7.11 56.52 0.40 0.09 16 24 C -0.08 -0.19 8.28 -39.61 -0.33 -0.52 16 25 H 0.06 -0.04 7.38 -51.93 -0.38 -0.42 16 26 H 0.06 -0.06 8.14 -51.93 -0.42 -0.48 16 27 H 0.06 0.00 8.14 -51.93 -0.42 -0.43 16 28 H 0.08 -0.01 7.87 -51.93 -0.41 -0.41 16 29 H 0.06 -0.03 7.38 -51.93 -0.38 -0.41 16 30 H 0.06 0.02 8.14 -51.93 -0.42 -0.41 16 31 H 0.06 -0.05 8.14 -51.93 -0.42 -0.48 16 32 H 0.13 -0.07 7.09 -52.49 -0.37 -0.44 16 33 H 0.13 -0.06 6.30 -52.48 -0.33 -0.39 16 34 H 0.06 -0.06 7.58 -51.93 -0.39 -0.45 16 35 H 0.06 -0.07 7.67 -51.93 -0.40 -0.46 16 36 H 0.08 -0.10 8.14 -51.93 -0.42 -0.52 16 37 H 0.07 0.03 8.12 -51.93 -0.42 -0.39 16 38 H 0.06 -0.04 8.04 -51.93 -0.42 -0.46 16 39 H 0.08 -0.10 8.04 -51.93 -0.42 -0.52 16 40 H 0.08 -0.12 8.04 -51.93 -0.42 -0.53 16 41 H 0.07 -0.14 7.96 -51.93 -0.41 -0.56 16 42 H 0.07 -0.13 7.96 -51.93 -0.41 -0.55 16 43 H 0.07 -0.13 7.96 -51.93 -0.41 -0.55 16 44 H 0.07 -0.13 7.96 -51.93 -0.41 -0.54 16 45 H 0.07 -0.12 7.96 -51.93 -0.41 -0.54 16 46 H 0.07 -0.14 7.96 -51.93 -0.41 -0.55 16 47 H 0.08 -0.22 8.03 -51.93 -0.42 -0.63 16 48 H 0.08 -0.22 8.06 -51.93 -0.42 -0.64 16 49 H 0.08 0.11 7.83 -51.93 -0.41 -0.30 16 50 H 0.37 0.34 8.61 45.56 0.39 0.73 16 51 H 0.13 0.17 4.77 -52.49 -0.25 -0.08 16 LS Contribution 397.14 15.07 5.98 5.98 Total: 0.00 -3.54 397.14 -10.02 -13.56 By element: Atomic # 1 Polarization: -2.90 SS G_CDS: -8.86 Total: -11.75 kcal Atomic # 6 Polarization: 2.71 SS G_CDS: 0.12 Total: 2.82 kcal Atomic # 8 Polarization: -2.03 SS G_CDS: -0.62 Total: -2.65 kcal Atomic # 14 Polarization: -1.32 SS G_CDS: -6.65 Total: -7.97 kcal Total LS contribution 5.98 Total: 5.98 kcal Total: -3.54 -10.02 -13.56 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_7_13942222_18051908.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -106.006 kcal (2) G-P(sol) polarization free energy of solvation -3.540 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -109.546 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.020 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -13.560 kcal (6) G-S(sol) free energy of system = (1) + (5) -119.566 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.67 seconds