Wall clock time and date at job start Tue Mar 9 2021 15:31:16 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42908 * 1 3 3 Si 1.86302 * 109.46902 * 2 1 4 4 C 1.50694 * 109.47341 * 120.00077 * 2 1 3 5 5 C 1.38213 * 119.82300 * 64.99956 * 4 2 1 6 6 C 1.38312 * 120.12233 * 180.02562 * 5 4 2 7 7 F 1.35097 * 120.11428 * 180.02562 * 6 5 4 8 8 C 1.39879 * 119.77438 * 0.02562 * 6 5 4 9 9 C 1.47565 * 120.17771 * 179.97438 * 8 6 5 10 10 O 1.21495 * 119.99213 * 0.02562 * 9 8 6 11 11 O 1.34723 * 120.00303 * 179.97438 * 9 8 6 12 12 C 1.45202 * 116.99772 * 179.97438 * 11 9 8 13 13 C 1.53000 * 109.47240 * 180.02562 * 12 11 9 14 14 H 1.08998 * 109.47470 * 179.97438 * 13 12 11 15 15 O 1.42968 * 109.47403 * 300.00616 * 13 12 11 16 16 C 1.43085 * 113.77669 * 178.79297 * 15 13 12 17 17 C 1.53266 * 108.93959 * 302.02818 * 16 15 13 18 18 H 1.09001 * 109.57278 * 294.58378 * 17 16 15 19 19 N 1.46505 * 109.57325 * 174.33080 * 17 16 15 20 20 C 1.34528 * 124.45854 * 299.69610 * 19 17 16 21 21 O 1.21450 * 125.70919 * 0.03646 * 20 19 17 22 22 C 1.47810 * 108.57877 * 179.90919 * 20 19 17 23 23 C 1.40948 * 105.87933 * 0.34538 * 22 20 19 24 24 C 1.38568 * 119.81995 * 179.79689 * 23 22 20 25 25 C 1.38610 * 119.71874 * 0.02562 * 24 23 22 26 26 C 1.38224 * 120.46396 * 359.97438 * 25 24 23 27 27 C 1.38567 * 134.30196 * 180.12723 * 22 20 19 28 28 C 1.34520 * 124.45954 * 119.99995 * 19 17 16 29 29 O 1.21445 * 125.70933 * 359.94028 * 28 19 17 30 30 C 1.53253 * 108.84410 * 54.52219 * 17 16 15 31 31 O 1.42973 * 109.47122 * 59.99704 * 13 12 11 32 32 C 1.39726 * 119.65657 * 0.25071 * 8 6 5 33 33 C 1.37839 * 119.86570 * 359.51231 * 32 8 6 34 34 H 0.96697 * 113.99848 * 299.99614 * 1 2 3 35 35 H 1.09002 * 109.47104 * 240.00579 * 2 1 3 36 36 H 1.48495 * 110.00491 * 300.00234 * 3 2 1 37 37 H 1.48507 * 109.99971 * 61.32154 * 3 2 1 38 38 H 1.07994 * 119.93867 * 0.02562 * 5 4 2 39 39 H 1.09001 * 109.47259 * 60.00306 * 12 11 9 40 40 H 1.08998 * 109.47396 * 300.00083 * 12 11 9 41 41 H 1.08996 * 109.56207 * 182.18711 * 16 15 13 42 42 H 1.09004 * 109.55712 * 61.86007 * 16 15 13 43 43 H 1.08002 * 120.13794 * 180.02562 * 24 23 22 44 44 H 1.08004 * 119.76730 * 180.02562 * 25 24 23 45 45 H 1.07993 * 119.77579 * 179.97438 * 26 25 24 46 46 H 1.08008 * 120.13300 * 0.24328 * 27 22 20 47 47 H 1.09001 * 109.56508 * 65.31377 * 30 17 16 48 48 H 1.09009 * 109.55905 * 185.63918 * 30 17 16 49 49 H 1.07996 * 120.06600 * 179.72932 * 32 8 6 50 50 H 1.08005 * 119.88251 * 180.22907 * 33 32 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9314 -0.7104 1.2304 5 6 1.6828 -2.0600 1.3945 6 6 2.1406 -2.7181 2.5217 7 9 1.8979 -4.0374 2.6817 8 6 2.8556 -2.0129 3.4953 9 6 3.3476 -2.7060 4.7016 10 8 3.1323 -3.8924 4.8507 11 8 4.0364 -2.0236 5.6369 12 6 4.4891 -2.7697 6.7974 13 6 5.2462 -1.8339 7.7419 14 1 5.5856 -2.3938 8.6133 15 8 6.3749 -1.2805 7.0610 16 6 7.1364 -0.3659 7.8554 17 6 6.2207 0.7724 8.3186 18 1 5.8909 1.3502 7.4552 19 7 6.9504 1.6441 9.2428 20 6 7.4800 1.2407 10.4118 21 8 7.4304 0.1134 10.8610 22 6 8.1352 2.3983 11.0565 23 6 7.9380 3.4879 10.1844 24 6 8.4397 4.7361 10.5168 25 6 9.1330 4.9037 11.7053 26 6 9.3264 3.8352 12.5606 27 6 8.8301 2.5809 12.2412 28 6 7.1740 2.9545 9.0370 29 8 6.8094 3.5925 8.0700 30 6 5.0051 0.1707 9.0319 31 8 4.3790 -0.7779 8.1627 32 6 3.0967 -0.6475 3.3227 33 6 2.6380 -0.0072 2.1915 34 1 -0.3933 0.4416 0.7651 35 1 1.7924 -0.5138 -0.8901 36 1 1.5615 2.4680 -1.2084 37 1 1.5879 2.4586 1.2243 38 1 1.1301 -2.6017 0.6413 39 1 5.1500 -3.5749 6.4765 40 1 3.6285 -3.1911 7.3168 41 1 7.9532 0.0420 7.2600 42 1 7.5403 -0.8859 8.7241 43 1 8.2913 5.5746 9.8526 44 1 9.5241 5.8763 11.9654 45 1 9.8685 3.9783 13.4835 46 1 8.9842 1.7495 12.9132 47 1 5.3281 -0.3289 9.9452 48 1 4.2975 0.9626 9.2780 49 1 3.6442 -0.0957 4.0723 50 1 2.8274 1.0474 2.0559 There are 80 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 80 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_1458_11946254_13594054.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 15:31:16 Heat of formation + Delta-G solvation = -204.898616 kcal Electronic energy + Delta-G solvation = -43381.296707 eV Core-core repulsion = 37415.308906 eV Total energy + Delta-G solvation = -5965.987802 eV No. of doubly occupied orbitals = 80 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 444.124 amu Computer time = 1.46 seconds Orbital eigenvalues (eV) -49.91947 -43.71818 -41.66990 -41.10531 -40.30833 -39.85655 -39.62578 -37.82805 -37.42351 -37.07994 -37.01280 -34.60606 -33.25117 -32.39996 -31.91047 -31.75714 -29.94170 -27.82021 -27.45007 -26.38473 -25.54448 -24.55238 -24.08486 -23.60607 -23.48549 -22.45088 -21.93506 -21.03722 -19.29962 -19.09542 -19.07526 -18.94911 -18.71845 -18.15332 -17.93723 -17.71139 -17.65695 -17.26049 -17.18034 -16.99424 -16.71432 -16.58288 -16.43940 -16.20828 -16.11421 -16.09165 -15.84272 -15.64771 -15.31368 -15.27401 -15.20948 -15.01883 -14.72029 -14.65539 -14.34732 -14.31625 -14.19469 -14.00859 -13.56998 -13.55926 -13.30467 -13.21569 -13.01751 -12.90007 -12.74838 -12.41449 -12.38332 -12.15145 -11.77662 -11.74352 -11.73593 -11.62704 -11.47196 -10.91574 -10.81255 -10.80660 -10.48611 -10.45855 -10.30040 -9.97135 -5.04961 -1.20276 -0.65996 -0.29431 -0.01136 0.77183 0.87720 1.12282 1.39152 1.43001 1.50140 1.63247 1.87258 2.21913 2.27407 2.34414 2.34576 2.39040 2.94935 3.02672 3.15941 3.20576 3.25923 3.30453 3.33055 3.46102 3.49532 3.57957 3.66080 3.73454 3.80582 3.83355 3.89971 3.93395 3.99568 4.04144 4.09625 4.12245 4.13196 4.22099 4.30803 4.32316 4.45052 4.50343 4.52902 4.58067 4.66498 4.75727 4.79899 4.86032 4.89590 4.96060 5.06884 5.26085 5.29960 5.37458 5.46436 5.54349 5.76329 5.93805 6.25052 6.38109 6.69589 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.525 6.525 2 C -0.083 4.083 3 Si 0.692 3.308 4 C -0.053 4.053 5 C -0.142 4.142 6 C 0.168 3.832 7 F -0.111 7.111 8 C -0.159 4.159 9 C 0.509 3.491 10 O -0.492 6.492 11 O -0.331 6.331 12 C 0.087 3.913 13 C 0.245 3.755 14 H 0.090 0.910 15 O -0.370 6.370 16 C 0.048 3.952 17 C 0.075 3.925 18 H 0.130 0.870 19 N -0.570 5.570 20 C 0.576 3.424 21 O -0.459 6.459 22 C -0.143 4.143 23 C -0.140 4.140 24 C -0.042 4.042 25 C -0.092 4.092 26 C -0.093 4.093 27 C -0.041 4.041 28 C 0.577 3.423 29 O -0.453 6.453 30 C 0.047 3.953 31 O -0.370 6.370 32 C -0.023 4.023 33 C -0.145 4.145 34 H 0.379 0.621 35 H 0.126 0.874 36 H -0.253 1.253 37 H -0.256 1.256 38 H 0.150 0.850 39 H 0.100 0.900 40 H 0.100 0.900 41 H 0.110 0.890 42 H 0.074 0.926 43 H 0.145 0.855 44 H 0.145 0.855 45 H 0.145 0.855 46 H 0.144 0.856 47 H 0.075 0.925 48 H 0.110 0.890 49 H 0.155 0.845 50 H 0.143 0.857 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.933 6.928 4.520 10.180 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.331 6.331 2 C -0.192 4.192 3 Si 0.593 3.407 4 C -0.054 4.054 5 C -0.161 4.161 6 C 0.148 3.852 7 F -0.089 7.089 8 C -0.161 4.161 9 C 0.353 3.647 10 O -0.380 6.380 11 O -0.247 6.247 12 C 0.013 3.987 13 C 0.149 3.851 14 H 0.107 0.893 15 O -0.289 6.289 16 C -0.030 4.030 17 C -0.027 4.027 18 H 0.148 0.852 19 N -0.316 5.316 20 C 0.365 3.635 21 O -0.330 6.330 22 C -0.146 4.146 23 C -0.144 4.144 24 C -0.061 4.061 25 C -0.110 4.110 26 C -0.111 4.111 27 C -0.060 4.060 28 C 0.366 3.634 29 O -0.323 6.323 30 C -0.030 4.030 31 O -0.289 6.289 32 C -0.041 4.041 33 C -0.163 4.163 34 H 0.227 0.773 35 H 0.144 0.856 36 H -0.178 1.178 37 H -0.181 1.181 38 H 0.168 0.832 39 H 0.118 0.882 40 H 0.118 0.882 41 H 0.128 0.872 42 H 0.093 0.907 43 H 0.163 0.837 44 H 0.163 0.837 45 H 0.163 0.837 46 H 0.162 0.838 47 H 0.094 0.906 48 H 0.128 0.872 49 H 0.172 0.828 50 H 0.161 0.839 Dipole moment (debyes) X Y Z Total from point charges 5.304 6.639 3.434 9.165 hybrid contribution -0.875 -0.533 1.043 1.462 sum 4.429 6.106 4.477 8.772 Atomic orbital electron populations 1.86645 1.17055 1.80029 1.49395 1.25203 0.84451 1.11569 0.97974 0.94805 0.91511 0.73758 0.80673 1.20460 0.95241 0.93493 0.96159 1.21001 1.02749 0.94805 0.97503 1.17708 0.95283 0.78465 0.93721 1.91633 1.91463 1.30588 1.95214 1.19194 1.06971 0.95326 0.94646 1.20812 0.75786 0.85288 0.82810 1.90937 1.54141 1.15658 1.77295 1.86611 1.65860 1.42231 1.30040 1.23130 0.99271 0.92647 0.83630 1.23669 0.81355 0.87239 0.92799 0.89338 1.88254 1.39940 1.59865 1.40801 1.23032 0.93540 0.89222 0.97173 1.22659 0.93472 0.92912 0.93669 0.85188 1.46455 1.52374 1.11491 1.21264 1.18460 0.77101 0.87988 0.79924 1.90820 1.55115 1.21047 1.65986 1.20461 1.02891 0.93783 0.97509 1.20470 1.02465 0.95672 0.95790 1.20871 0.93589 0.95252 0.96351 1.21564 0.96399 1.00098 0.92959 1.21559 0.97741 0.91802 1.00028 1.20863 0.93157 0.98220 0.93776 1.18403 0.78256 0.80800 0.85960 1.90853 1.48464 1.62060 1.30891 1.23036 0.94232 0.93119 0.92638 1.88255 1.36996 1.37731 1.65944 1.21388 0.94278 0.91642 0.96777 1.21138 1.00190 1.00769 0.94165 0.77343 0.85587 1.17819 1.18050 0.83205 0.88152 0.88216 0.87152 0.90735 0.83744 0.83688 0.83704 0.83799 0.90640 0.87226 0.82750 0.83949 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.52 -0.06 12.83 -35.23 -0.45 -0.51 16 2 C -0.08 0.12 2.80 36.00 0.10 0.23 16 3 Si 0.69 -1.53 29.87 -169.99 -5.08 -6.60 16 4 C -0.05 0.04 5.36 -104.55 -0.56 -0.52 16 5 C -0.14 -0.10 9.64 -39.56 -0.38 -0.48 16 6 C 0.17 0.47 7.29 -38.94 -0.28 0.19 16 7 F -0.11 -0.58 15.55 2.25 0.04 -0.54 16 8 C -0.16 -0.38 5.88 -104.92 -0.62 -1.00 16 9 C 0.51 2.07 7.89 34.53 0.27 2.35 16 10 O -0.49 -3.31 15.13 -19.26 -0.29 -3.60 16 11 O -0.33 -0.94 9.27 -47.13 -0.44 -1.37 16 12 C 0.09 0.10 5.56 37.16 0.21 0.30 16 13 C 0.24 0.17 3.59 37.16 0.13 0.31 16 14 H 0.09 -0.10 8.14 -51.93 -0.42 -0.53 16 15 O -0.37 -0.56 10.44 -63.30 -0.66 -1.22 16 16 C 0.05 0.01 6.33 37.30 0.24 0.24 16 17 C 0.07 0.01 3.08 -67.66 -0.21 -0.19 16 18 H 0.13 0.08 7.59 -51.93 -0.39 -0.32 16 19 N -0.57 -0.17 2.53 -110.22 -0.28 -0.45 16 20 C 0.58 0.32 7.35 -12.46 -0.09 0.23 16 21 O -0.46 -1.04 15.16 5.41 0.08 -0.95 16 22 C -0.14 0.11 6.40 -104.84 -0.67 -0.56 16 23 C -0.14 0.10 6.41 -104.83 -0.67 -0.58 16 24 C -0.04 0.11 10.09 -39.32 -0.40 -0.29 16 25 C -0.09 0.39 10.03 -39.45 -0.40 0.00 16 26 C -0.09 0.40 10.04 -39.45 -0.40 0.00 16 27 C -0.04 0.11 10.09 -39.32 -0.40 -0.28 16 28 C 0.58 0.56 8.02 -12.46 -0.10 0.46 16 29 O -0.45 -1.53 17.44 5.41 0.09 -1.44 16 30 C 0.05 0.01 6.32 37.29 0.24 0.25 16 31 O -0.37 -0.60 10.44 -63.30 -0.66 -1.26 16 32 C -0.02 0.00 9.62 -39.17 -0.38 -0.37 16 33 C -0.15 0.20 8.65 -39.64 -0.34 -0.14 16 34 H 0.38 -1.04 8.70 45.56 0.40 -0.64 16 35 H 0.13 -0.31 7.96 -51.93 -0.41 -0.72 16 36 H -0.25 -0.32 7.11 56.52 0.40 0.08 16 37 H -0.26 0.13 7.00 56.52 0.40 0.52 16 38 H 0.15 -0.02 8.06 -52.49 -0.42 -0.44 16 39 H 0.10 0.03 8.14 -51.93 -0.42 -0.39 16 40 H 0.10 0.04 8.14 -51.93 -0.42 -0.39 16 41 H 0.11 -0.09 8.14 -51.93 -0.42 -0.51 16 42 H 0.07 0.02 6.71 -51.93 -0.35 -0.33 16 43 H 0.14 -0.56 8.06 -52.49 -0.42 -0.98 16 44 H 0.15 -0.96 8.06 -52.48 -0.42 -1.38 16 45 H 0.15 -0.96 8.06 -52.49 -0.42 -1.38 16 46 H 0.14 -0.58 8.06 -52.48 -0.42 -1.00 16 47 H 0.08 0.03 6.63 -51.93 -0.34 -0.32 16 48 H 0.11 -0.07 8.14 -51.92 -0.42 -0.49 16 49 H 0.15 -0.21 7.61 -52.49 -0.40 -0.61 16 50 H 0.14 -0.49 4.81 -52.48 -0.25 -0.74 16 LS Contribution 434.21 15.07 6.54 6.54 Total: 0.00 -10.84 434.21 -11.00 -21.84 By element: Atomic # 1 Polarization: -5.38 SS G_CDS: -5.19 Total: -10.57 kcal Atomic # 6 Polarization: 4.85 SS G_CDS: -4.70 Total: 0.14 kcal Atomic # 7 Polarization: -0.17 SS G_CDS: -0.28 Total: -0.45 kcal Atomic # 8 Polarization: -8.04 SS G_CDS: -2.33 Total: -10.36 kcal Atomic # 9 Polarization: -0.58 SS G_CDS: 0.04 Total: -0.54 kcal Atomic # 14 Polarization: -1.53 SS G_CDS: -5.08 Total: -6.60 kcal Total LS contribution 6.54 Total: 6.54 kcal Total: -10.84 -11.00 -21.84 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_1458_11946254_13594054.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -183.063 kcal (2) G-P(sol) polarization free energy of solvation -10.840 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -193.903 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.995 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.835 kcal (6) G-S(sol) free energy of system = (1) + (5) -204.899 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.46 seconds