Wall clock time and date at job start Tue Mar 9 2021 16:10:34 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53000 * 1 3 3 C 1.53008 * 109.47008 * 2 1 4 4 C 1.52994 * 109.47286 * 239.99698 * 2 1 3 5 5 O 1.45202 * 109.46964 * 119.99510 * 2 1 3 6 6 C 1.34638 * 116.99776 * 60.00058 * 5 2 1 7 7 O 1.21513 * 119.99956 * 0.02562 * 6 5 2 8 8 N 1.34777 * 119.99672 * 180.27362 * 6 5 2 9 9 C 1.46505 * 119.99722 * 179.72257 * 8 6 5 10 10 H 1.09002 * 112.85194 * 336.20682 * 9 8 6 11 11 C 1.53782 * 113.61081 * 107.50446 * 9 8 6 12 12 C 1.53781 * 87.07926 * 139.98010 * 11 9 8 13 13 H 1.08999 * 113.68742 * 89.12747 * 12 11 9 14 14 C 1.53003 * 113.61643 * 220.01816 * 12 11 9 15 15 O 1.45201 * 109.46994 * 272.50319 * 14 12 11 16 16 C 1.34727 * 116.99607 * 180.02562 * 15 14 12 17 17 O 1.21489 * 120.00592 * 359.97438 * 16 15 14 18 18 C 1.47606 * 119.99950 * 179.97438 * 16 15 14 19 19 C 1.39680 * 120.12227 * 179.72698 * 18 16 15 20 20 C 1.37843 * 119.87151 * 179.69943 * 19 18 16 21 21 C 1.50705 * 119.93990 * 180.27397 * 20 19 18 22 22 O 1.42896 * 109.47191 * 255.30347 * 21 20 19 23 23 Si 1.86296 * 109.47072 * 135.30103 * 21 20 19 24 24 C 1.38643 * 120.12369 * 0.57358 * 20 19 18 25 25 F 1.35100 * 119.87672 * 179.73981 * 24 20 19 26 26 C 1.38690 * 120.24750 * 359.72385 * 24 20 19 27 27 C 1.37800 * 120.12513 * 359.97390 * 26 24 20 28 28 C 1.53776 * 113.61656 * 205.00333 * 9 8 6 29 29 H 1.08997 * 109.47363 * 300.00806 * 1 2 3 30 30 H 1.09005 * 109.46795 * 60.00585 * 1 2 3 31 31 H 1.09001 * 109.46811 * 179.97438 * 1 2 3 32 32 H 1.08996 * 109.46984 * 179.97438 * 3 2 1 33 33 H 1.08996 * 109.46584 * 299.99377 * 3 2 1 34 34 H 1.08998 * 109.47272 * 59.99708 * 3 2 1 35 35 H 1.08995 * 109.47307 * 299.99583 * 4 2 1 36 36 H 1.08999 * 109.47211 * 60.00515 * 4 2 1 37 37 H 1.09010 * 109.46887 * 180.02562 * 4 2 1 38 38 H 0.97000 * 120.00483 * 359.73141 * 8 6 5 39 39 H 1.08994 * 113.61800 * 254.53274 * 11 9 8 40 40 H 1.09001 * 113.61357 * 25.43523 * 11 9 8 41 41 H 1.09002 * 109.46641 * 32.49813 * 14 12 11 42 42 H 1.08996 * 109.47328 * 152.49966 * 14 12 11 43 43 H 1.07997 * 120.06635 * 359.97438 * 19 18 16 44 44 H 1.09003 * 109.46709 * 15.29949 * 21 20 19 45 45 H 0.96711 * 113.99839 * 299.99607 * 22 21 20 46 46 H 1.48493 * 110.00027 * 58.68379 * 23 21 20 47 47 H 1.48501 * 109.99576 * 180.02562 * 23 21 20 48 48 H 1.08007 * 119.93563 * 179.97438 * 26 24 20 49 49 H 1.07994 * 120.06036 * 180.02562 * 27 26 24 50 50 H 1.09001 * 113.61429 * 334.56980 * 28 9 8 51 51 H 1.08992 * 113.61719 * 105.47288 * 28 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4426 0.0000 4 6 2.0400 -0.7213 -1.2491 5 8 2.0140 -0.6844 1.1856 6 6 1.6522 -1.9722 1.3385 7 8 0.9516 -2.5096 0.5037 8 7 2.0630 -2.6638 2.4199 9 6 1.6643 -4.0633 2.5893 10 1 0.7503 -4.3113 2.0496 11 6 2.8097 -5.0626 2.3563 12 6 2.2560 -5.8554 3.5520 13 1 1.5043 -6.5952 3.2766 14 6 3.3428 -6.4247 4.4662 15 8 3.7567 -7.7264 3.9736 16 6 4.7141 -8.3682 4.6712 17 8 5.1905 -7.8542 5.6636 18 6 5.1842 -9.6959 4.2298 19 6 6.1808 -10.3610 4.9478 20 6 6.6116 -11.6035 4.5345 21 6 7.6823 -12.3252 5.3117 22 8 8.9190 -12.2518 4.5996 23 14 7.1956 -14.1103 5.5287 24 6 6.0662 -12.1877 3.4017 25 9 6.4959 -13.4033 2.9981 26 6 5.0808 -11.5291 2.6814 27 6 4.6381 -10.2894 3.0889 28 6 1.6603 -4.5297 4.0546 29 1 -0.3634 0.5139 0.8899 30 1 -0.3633 0.5138 -0.8901 31 1 -0.3633 -1.0277 -0.0005 32 1 3.1300 1.4426 0.0005 33 1 1.6767 1.9563 -0.8900 34 1 1.6766 1.9564 0.8899 35 1 1.6768 -1.7489 -1.2491 36 1 1.6768 -0.2075 -2.1392 37 1 3.1301 -0.7216 -1.2488 38 1 2.6225 -2.2349 3.0862 39 1 2.7383 -5.5955 1.4083 40 1 3.7994 -4.6411 2.5326 41 1 4.1994 -5.7506 4.4756 42 1 2.9499 -6.5271 5.4777 43 1 6.6097 -9.9047 5.8277 44 1 7.7981 -11.8586 6.2899 45 1 8.8896 -12.6488 3.7182 46 1 7.0036 -14.7492 4.2021 47 1 8.2431 -14.8328 6.2941 48 1 4.6597 -11.9887 1.7994 49 1 3.8705 -9.7777 2.5275 50 1 2.3358 -3.9627 4.6951 51 1 0.6611 -4.6325 4.4774 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_1458_12496220_15734238.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 16:10:34 Heat of formation + Delta-G solvation = -176.570896 kcal Electronic energy + Delta-G solvation = -34356.614236 eV Core-core repulsion = 29331.963187 eV Total energy + Delta-G solvation = -5024.651049 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 382.172 amu Computer time = 1.15 seconds Orbital eigenvalues (eV) -50.53071 -41.95246 -41.72589 -40.47167 -39.93602 -38.08656 -37.86352 -37.38396 -35.40888 -34.24277 -33.08327 -32.22297 -29.63562 -28.38042 -28.31658 -27.05642 -26.74437 -25.69336 -24.49746 -23.56224 -22.47681 -21.86777 -21.40205 -20.53108 -19.35858 -19.07076 -19.05045 -18.32283 -17.97811 -17.76129 -17.55827 -17.46449 -17.18626 -17.11423 -16.58972 -16.25691 -16.05288 -15.60135 -15.59319 -15.40816 -15.09479 -14.96275 -14.82338 -14.67792 -14.44586 -13.95738 -13.87867 -13.71065 -13.48049 -13.41884 -13.37635 -13.21222 -13.02109 -12.96447 -12.89971 -12.88024 -12.53979 -12.44882 -12.38719 -12.26288 -11.99809 -11.82711 -11.62462 -11.40607 -11.34174 -11.26045 -11.11125 -10.92141 -10.20434 -10.15635 -9.95984 -4.96888 -0.68090 -0.02746 1.14352 1.17005 1.26849 1.49372 1.58707 1.72681 1.93825 2.40982 2.90646 3.13045 3.20835 3.33704 3.41293 3.42321 3.54782 3.57203 3.72920 3.74689 3.79327 3.83779 3.93156 3.95636 4.03987 4.18555 4.26832 4.28883 4.45229 4.50501 4.59621 4.59926 4.63087 4.70463 4.71111 4.75074 4.77891 4.79360 4.84873 4.86217 4.89482 4.91959 4.96334 5.02193 5.05614 5.08620 5.18005 5.25737 5.28337 5.32866 5.50763 5.52842 5.59033 6.29848 6.39108 6.58388 7.33069 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.180 4.180 2 C 0.127 3.873 3 C -0.138 4.138 4 C -0.180 4.180 5 O -0.371 6.371 6 C 0.643 3.357 7 O -0.594 6.594 8 N -0.691 5.691 9 C 0.134 3.866 10 H 0.109 0.891 11 C -0.147 4.147 12 C -0.097 4.097 13 H 0.118 0.882 14 C 0.077 3.923 15 O -0.347 6.347 16 C 0.514 3.486 17 O -0.533 6.533 18 C -0.146 4.146 19 C -0.010 4.010 20 C -0.159 4.159 21 C -0.081 4.081 22 O -0.543 6.543 23 Si 0.749 3.251 24 C 0.122 3.878 25 F -0.127 7.127 26 C -0.153 4.153 27 C -0.019 4.019 28 C -0.122 4.122 29 H 0.062 0.938 30 H 0.086 0.914 31 H 0.064 0.936 32 H 0.068 0.932 33 H 0.098 0.902 34 H 0.069 0.931 35 H 0.064 0.936 36 H 0.086 0.914 37 H 0.060 0.940 38 H 0.417 0.583 39 H 0.072 0.928 40 H 0.090 0.910 41 H 0.074 0.926 42 H 0.080 0.920 43 H 0.150 0.850 44 H 0.135 0.865 45 H 0.384 0.616 46 H -0.254 1.254 47 H -0.306 1.306 48 H 0.172 0.828 49 H 0.172 0.828 50 H 0.106 0.894 51 H 0.096 0.904 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.835 1.515 0.039 4.123 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.237 4.237 2 C 0.091 3.909 3 C -0.195 4.195 4 C -0.237 4.237 5 O -0.286 6.286 6 C 0.396 3.604 7 O -0.485 6.485 8 N -0.350 5.350 9 C 0.031 3.969 10 H 0.127 0.873 11 C -0.186 4.186 12 C -0.116 4.116 13 H 0.136 0.864 14 C 0.003 3.997 15 O -0.263 6.263 16 C 0.361 3.639 17 O -0.424 6.424 18 C -0.147 4.147 19 C -0.028 4.028 20 C -0.160 4.160 21 C -0.189 4.189 22 O -0.351 6.351 23 Si 0.652 3.348 24 C 0.102 3.898 25 F -0.106 7.106 26 C -0.171 4.171 27 C -0.037 4.037 28 C -0.160 4.160 29 H 0.081 0.919 30 H 0.105 0.895 31 H 0.083 0.917 32 H 0.087 0.913 33 H 0.117 0.883 34 H 0.088 0.912 35 H 0.083 0.917 36 H 0.105 0.895 37 H 0.079 0.921 38 H 0.254 0.746 39 H 0.091 0.909 40 H 0.108 0.892 41 H 0.092 0.908 42 H 0.098 0.902 43 H 0.167 0.833 44 H 0.153 0.847 45 H 0.233 0.767 46 H -0.179 1.179 47 H -0.234 1.234 48 H 0.189 0.811 49 H 0.189 0.811 50 H 0.124 0.876 51 H 0.115 0.885 Dipole moment (debyes) X Y Z Total from point charges -3.674 0.964 0.220 3.804 hybrid contribution 1.237 0.255 -0.673 1.431 sum -2.437 1.219 -0.453 2.762 Atomic orbital electron populations 1.22472 0.93972 1.03733 1.03513 1.22344 0.94503 0.92544 0.81526 1.21894 1.02414 0.90964 1.04247 1.22471 1.01567 1.02289 0.97380 1.86315 1.71579 1.23417 1.47239 1.18441 0.78556 0.80677 0.82696 1.90900 1.42314 1.71007 1.44271 1.44797 1.54836 1.12574 1.22768 1.22583 0.98920 0.77072 0.98365 0.87301 1.23624 0.98944 0.96779 0.99222 1.22327 0.97270 0.96446 0.95581 0.86423 1.23268 0.97771 0.80091 0.98534 1.86514 1.51838 1.34008 1.53933 1.21169 0.76723 0.85576 0.80473 1.90865 1.56692 1.67944 1.26879 1.19213 1.02121 0.93210 1.00201 1.21045 0.92149 0.91298 0.98305 1.20124 1.01640 0.96814 0.97406 1.25154 0.83804 1.12027 0.97931 1.86628 1.32374 1.82094 1.33987 0.94640 0.86927 0.72473 0.80744 1.18172 0.95814 0.81200 0.94586 1.91572 1.88417 1.40715 1.89859 1.21435 0.97525 0.95945 1.02243 1.21608 0.96454 0.93033 0.92589 1.23364 1.03523 0.94248 0.94912 0.91917 0.89508 0.91706 0.91262 0.88338 0.91167 0.91719 0.89493 0.92055 0.74606 0.90905 0.89194 0.90815 0.90158 0.83255 0.84735 0.76697 1.17918 1.23411 0.81077 0.81062 0.87601 0.88521 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.50 8.37 71.98 0.60 0.10 16 2 C 0.13 0.34 1.13 -10.79 -0.01 0.33 16 3 C -0.14 0.31 8.85 71.98 0.64 0.94 16 4 C -0.18 -0.54 8.37 71.98 0.60 0.06 16 5 O -0.37 -1.87 9.94 -55.47 -0.55 -2.42 16 6 C 0.64 3.76 8.06 129.79 1.05 4.81 16 7 O -0.59 -6.59 11.48 19.80 0.23 -6.36 16 8 N -0.69 0.66 5.36 -567.59 -3.04 -2.38 16 9 C 0.13 -0.44 4.24 45.52 0.19 -0.25 16 10 H 0.11 -0.01 7.46 -2.39 -0.02 -0.02 16 11 C -0.15 0.63 7.43 31.12 0.23 0.86 16 12 C -0.10 0.66 4.02 -10.27 -0.04 0.62 16 13 H 0.12 -0.91 8.14 -2.39 -0.02 -0.93 16 14 C 0.08 -0.28 5.31 71.98 0.38 0.10 16 15 O -0.35 0.25 9.47 -56.37 -0.53 -0.28 16 16 C 0.51 1.37 7.89 70.29 0.55 1.92 16 17 O -0.53 -4.47 16.13 19.87 0.32 -4.15 16 18 C -0.15 0.06 5.87 -20.10 -0.12 -0.06 16 19 C -0.01 0.00 9.21 22.52 0.21 0.21 16 20 C -0.16 0.12 4.78 -19.86 -0.09 0.03 16 21 C -0.08 0.02 2.80 71.24 0.20 0.22 16 22 O -0.54 -1.93 12.88 -148.98 -1.92 -3.85 16 23 Si 0.75 -0.41 30.81 68.60 2.11 1.70 16 24 C 0.12 -0.19 6.63 22.47 0.15 -0.04 16 25 F -0.13 -0.09 12.57 44.97 0.57 0.47 16 26 C -0.15 0.76 10.01 22.27 0.22 0.99 16 27 C -0.02 0.09 9.61 22.52 0.22 0.31 16 28 C -0.12 1.01 7.39 31.12 0.23 1.24 16 29 H 0.06 0.13 8.14 -2.39 -0.02 0.11 16 30 H 0.09 -0.05 8.14 -2.38 -0.02 -0.07 16 31 H 0.06 0.51 5.88 -2.39 -0.01 0.50 16 32 H 0.07 -0.16 8.14 -2.39 -0.02 -0.18 16 33 H 0.10 -0.54 8.14 -2.39 -0.02 -0.55 16 34 H 0.07 -0.17 8.14 -2.39 -0.02 -0.19 16 35 H 0.06 0.53 5.88 -2.39 -0.01 0.51 16 36 H 0.09 -0.03 8.14 -2.39 -0.02 -0.05 16 37 H 0.06 0.15 8.14 -2.38 -0.02 0.13 16 38 H 0.42 -2.24 8.84 -92.71 -0.82 -3.06 16 39 H 0.07 -0.17 8.14 -2.39 -0.02 -0.19 16 40 H 0.09 -0.38 7.90 -2.39 -0.02 -0.40 16 41 H 0.07 -0.22 7.84 -2.39 -0.02 -0.24 16 42 H 0.08 -0.31 8.14 -2.39 -0.02 -0.33 16 43 H 0.15 -0.01 7.59 -2.91 -0.02 -0.03 16 44 H 0.13 -0.35 7.77 -2.39 -0.02 -0.37 16 45 H 0.38 -0.51 8.41 -74.05 -0.62 -1.13 16 46 H -0.25 -0.78 5.27 99.48 0.52 -0.26 16 47 H -0.31 -2.21 7.11 99.48 0.71 -1.50 16 48 H 0.17 -1.62 8.06 -2.91 -0.02 -1.64 16 49 H 0.17 -1.52 7.61 -2.91 -0.02 -1.54 16 50 H 0.11 -1.09 8.08 -2.39 -0.02 -1.11 16 51 H 0.10 -0.91 8.14 -2.39 -0.02 -0.93 16 Total: 0.00 -20.14 421.86 1.78 -18.36 By element: Atomic # 1 Polarization: -12.87 SS G_CDS: -0.61 Total: -13.48 kcal Atomic # 6 Polarization: 7.18 SS G_CDS: 5.21 Total: 12.39 kcal Atomic # 7 Polarization: 0.66 SS G_CDS: -3.04 Total: -2.38 kcal Atomic # 8 Polarization: -14.61 SS G_CDS: -2.46 Total: -17.07 kcal Atomic # 9 Polarization: -0.09 SS G_CDS: 0.57 Total: 0.47 kcal Atomic # 14 Polarization: -0.41 SS G_CDS: 2.11 Total: 1.70 kcal Total: -20.14 1.78 -18.36 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_1458_12496220_15734238.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -158.210 kcal (2) G-P(sol) polarization free energy of solvation -20.137 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -178.347 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.776 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.361 kcal (6) G-S(sol) free energy of system = (1) + (5) -176.571 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.15 seconds