Wall clock time and date at job start Tue Mar 9 2021 16:51:26 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42903 * 1 3 3 C 1.35990 * 117.00320 * 2 1 4 4 C 1.39147 * 120.07800 * 180.02562 * 3 2 1 5 5 O 1.36004 * 120.06783 * 359.95506 * 4 3 2 6 6 C 1.42906 * 116.99452 * 180.02562 * 5 4 3 7 7 C 1.50696 * 109.46629 * 179.97438 * 6 5 4 8 8 O 1.20828 * 120.00359 * 359.97438 * 7 6 5 9 9 O 1.34228 * 120.00040 * 179.97438 * 7 6 5 10 10 C 1.45201 * 117.00409 * 180.02562 * 9 7 6 11 11 C 1.52999 * 109.47500 * 180.02562 * 10 9 7 12 12 H 1.09002 * 112.84751 * 316.19388 * 11 10 9 13 13 C 1.53775 * 113.61688 * 87.49794 * 11 10 9 14 14 C 1.53775 * 87.08128 * 89.11842 * 13 11 10 15 15 O 1.42905 * 113.69192 * 270.87185 * 14 13 11 16 16 C 1.42901 * 113.99872 * 162.74458 * 15 14 13 17 17 C 1.53007 * 113.61645 * 139.98118 * 14 13 11 18 18 F 1.39903 * 109.46988 * 327.19789 * 17 14 13 19 19 F 1.39900 * 109.47070 * 87.19819 * 17 14 13 20 20 F 1.39898 * 109.46883 * 207.19964 * 17 14 13 21 21 C 1.53775 * 113.61540 * 184.99948 * 11 10 9 22 22 C 1.38558 * 119.85880 * 179.97438 * 4 3 2 23 23 C 1.38247 * 119.99674 * 359.74332 * 22 4 3 24 24 C 1.38248 * 120.14407 * 0.51313 * 23 22 4 25 25 C 1.50702 * 119.92327 * 179.76569 * 24 23 22 26 26 O 1.42907 * 109.47173 * 119.72184 * 25 24 23 27 27 Si 1.86295 * 109.47422 * 359.72067 * 25 24 23 28 28 C 1.38245 * 120.14917 * 359.48571 * 24 23 22 29 29 H 1.08998 * 109.46932 * 180.02562 * 1 2 3 30 30 H 1.08996 * 109.47176 * 300.00500 * 1 2 3 31 31 H 1.09002 * 109.46939 * 60.00780 * 1 2 3 32 32 H 1.08998 * 109.47257 * 299.99649 * 6 5 4 33 33 H 1.08995 * 109.47328 * 59.99823 * 6 5 4 34 34 H 1.09004 * 109.46760 * 299.99655 * 10 9 7 35 35 H 1.08996 * 109.47197 * 59.99825 * 10 9 7 36 36 H 1.09003 * 113.61774 * 203.66825 * 13 11 10 37 37 H 1.09003 * 113.61859 * 334.57090 * 13 11 10 38 38 H 1.08999 * 109.47493 * 64.84199 * 16 15 14 39 39 H 1.08998 * 109.47060 * 184.84451 * 16 15 14 40 40 H 1.09006 * 109.46834 * 304.84090 * 16 15 14 41 41 H 1.08996 * 113.61886 * 25.42922 * 21 11 10 42 42 H 1.09001 * 113.61642 * 156.33131 * 21 11 10 43 43 H 1.08001 * 120.00695 * 179.97438 * 22 4 3 44 44 H 1.08006 * 119.92803 * 180.25116 * 23 22 4 45 45 H 1.09000 * 109.47034 * 239.71770 * 25 24 23 46 46 H 0.96693 * 113.99764 * 300.00311 * 26 25 24 47 47 H 1.48504 * 110.00327 * 179.97438 * 27 25 24 48 48 H 1.48495 * 110.00118 * 301.32110 * 27 25 24 49 49 H 1.08002 * 119.99994 * 180.23459 * 28 24 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0465 1.2116 0.0000 4 6 3.4359 1.2863 -0.0005 5 8 4.1795 0.1475 -0.0001 6 6 5.6004 0.3006 -0.0002 7 6 6.2518 -1.0583 0.0009 8 8 5.5695 -2.0555 0.0021 9 8 7.5902 -1.1610 0.0006 10 6 8.1486 -2.5013 0.0011 11 6 9.6763 -2.4174 0.0013 12 1 10.0592 -1.6706 -0.6943 13 6 10.2879 -2.3217 1.4089 14 6 10.3192 -3.8591 1.4143 15 8 9.1236 -4.4561 1.9206 16 6 8.9736 -5.8358 1.5802 17 6 11.5867 -4.4442 2.0406 18 9 12.6680 -3.5939 1.7859 19 9 11.4084 -4.5708 3.4224 20 9 11.8425 -5.7029 1.4861 21 6 10.3684 -3.7852 -0.1210 22 6 4.0603 2.5232 -0.0011 23 6 3.3030 3.6797 -0.0064 24 6 1.9225 3.6056 -0.0006 25 6 1.1018 4.8696 -0.0011 26 8 0.2773 4.9017 -1.1679 27 14 2.2366 6.3470 -0.0017 28 6 1.2932 2.3747 0.0000 29 1 -0.3633 -1.0277 0.0005 30 1 -0.3633 0.5139 0.8899 31 1 -0.3633 0.5137 -0.8901 32 1 5.9066 0.8500 -0.8903 33 1 5.9066 0.8506 0.8896 34 1 7.8143 -3.0338 0.8916 35 1 7.8138 -3.0348 -0.8884 36 1 11.2774 -1.8647 1.4250 37 1 9.6120 -1.8962 2.1507 38 1 9.7648 -6.4155 2.0556 39 1 8.0036 -6.1921 1.9268 40 1 9.0379 -5.9521 0.4982 41 1 9.7575 -4.5411 -0.6143 42 1 11.3798 -3.7284 -0.5232 43 1 5.1386 2.5839 -0.0011 44 1 3.7908 4.6433 -0.0109 45 1 0.4729 4.8948 0.8888 46 1 0.7711 4.8817 -1.9990 47 1 1.4394 7.5999 -0.0029 48 1 3.1212 6.3084 1.1903 49 1 0.2146 2.3196 0.0007 There are 75 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 75 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_1458_471980_17321610.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 16:51:26 Heat of formation + Delta-G solvation = -306.432244 kcal Electronic energy + Delta-G solvation = -39144.958845 eV Core-core repulsion = 33206.276112 eV Total energy + Delta-G solvation = -5938.682733 eV No. of doubly occupied orbitals = 75 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 407.141 amu Computer time = 1.18 seconds Orbital eigenvalues (eV) -51.18845 -48.73630 -48.62007 -42.04264 -41.70529 -41.05446 -39.53149 -38.92050 -37.75802 -37.03234 -36.86079 -32.22824 -31.55684 -31.07293 -29.79513 -28.49985 -28.32553 -27.28728 -26.93452 -26.23105 -23.88330 -23.36966 -22.66791 -21.98505 -20.75845 -19.96725 -19.77203 -19.47992 -19.26571 -18.63933 -18.47815 -18.05754 -18.01358 -17.66713 -17.36572 -17.01264 -16.86214 -16.58282 -16.32790 -16.12237 -15.99477 -15.82760 -15.69011 -15.63242 -15.51861 -15.39517 -15.13004 -14.98787 -14.83344 -14.77445 -14.66524 -14.33591 -14.32182 -14.05481 -13.75143 -13.60670 -13.56513 -13.41973 -13.24871 -12.89836 -12.68660 -12.56125 -12.46559 -12.27242 -12.19332 -12.09008 -12.05404 -11.81980 -11.76479 -11.72146 -11.44049 -10.89525 -10.50206 -9.82880 -8.91346 -5.07912 0.12822 0.25499 0.92217 1.08471 1.24697 1.52483 1.59054 1.93287 1.96344 2.26803 2.31936 2.50919 2.53038 2.59156 2.78841 3.09672 3.23440 3.36421 3.38536 3.51168 3.58719 3.63005 3.74001 3.77677 3.80279 3.90519 4.04124 4.08384 4.09988 4.15680 4.21807 4.21833 4.26066 4.28562 4.30712 4.34556 4.44698 4.46109 4.51937 4.53777 4.62103 4.63056 4.65191 4.82278 4.95134 5.05725 5.29227 5.33204 5.50732 5.58978 5.88511 6.46801 6.52191 6.65189 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.025 3.975 2 O -0.302 6.302 3 C 0.109 3.891 4 C 0.103 3.897 5 O -0.282 6.282 6 C 0.067 3.933 7 C 0.465 3.535 8 O -0.477 6.477 9 O -0.352 6.352 10 C 0.079 3.921 11 C -0.100 4.100 12 H 0.109 0.891 13 C -0.112 4.112 14 C 0.037 3.963 15 O -0.332 6.332 16 C 0.010 3.990 17 C 0.437 3.563 18 F -0.175 7.175 19 F -0.174 7.174 20 F -0.181 7.181 21 C -0.143 4.143 22 C -0.167 4.167 23 C -0.114 4.114 24 C -0.113 4.113 25 C -0.067 4.067 26 O -0.540 6.540 27 Si 0.691 3.309 28 C -0.146 4.146 29 H 0.103 0.897 30 H 0.056 0.944 31 H 0.058 0.942 32 H 0.109 0.891 33 H 0.108 0.892 34 H 0.094 0.906 35 H 0.078 0.922 36 H 0.118 0.882 37 H 0.099 0.901 38 H 0.054 0.946 39 H 0.103 0.897 40 H 0.056 0.944 41 H 0.096 0.904 42 H 0.115 0.885 43 H 0.142 0.858 44 H 0.133 0.867 45 H 0.114 0.886 46 H 0.380 0.620 47 H -0.255 1.255 48 H -0.257 1.257 49 H 0.141 0.859 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.207 2.916 -3.810 5.281 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.070 4.070 2 O -0.215 6.215 3 C 0.063 3.937 4 C 0.058 3.942 5 O -0.196 6.196 6 C -0.009 4.009 7 C 0.305 3.695 8 O -0.361 6.361 9 O -0.269 6.269 10 C 0.006 3.994 11 C -0.118 4.118 12 H 0.127 0.873 13 C -0.149 4.149 14 C -0.006 4.006 15 O -0.250 6.250 16 C -0.085 4.085 17 C 0.383 3.617 18 F -0.156 7.156 19 F -0.155 7.155 20 F -0.163 7.163 21 C -0.180 4.180 22 C -0.186 4.186 23 C -0.131 4.131 24 C -0.114 4.114 25 C -0.177 4.177 26 O -0.346 6.346 27 Si 0.593 3.407 28 C -0.165 4.165 29 H 0.121 0.879 30 H 0.074 0.926 31 H 0.076 0.924 32 H 0.127 0.873 33 H 0.126 0.874 34 H 0.112 0.888 35 H 0.096 0.904 36 H 0.136 0.864 37 H 0.118 0.882 38 H 0.072 0.928 39 H 0.121 0.879 40 H 0.074 0.926 41 H 0.114 0.886 42 H 0.133 0.867 43 H 0.160 0.840 44 H 0.151 0.849 45 H 0.131 0.869 46 H 0.227 0.773 47 H -0.180 1.180 48 H -0.182 1.182 49 H 0.159 0.841 Dipole moment (debyes) X Y Z Total from point charges 1.701 2.985 -2.800 4.432 hybrid contribution 0.018 -0.834 0.445 0.945 sum 1.719 2.152 -2.355 3.624 Atomic orbital electron populations 1.23137 0.78024 1.04432 1.01429 1.86241 1.21417 1.25344 1.88533 1.18268 0.88921 0.85605 1.00903 1.18195 0.88112 0.85411 1.02468 1.86203 1.15745 1.28373 1.89261 1.21887 0.80743 0.92704 1.05593 1.22808 0.81215 0.91481 0.74009 1.90765 1.63982 1.38621 1.42772 1.86366 1.21907 1.34328 1.84334 1.23056 0.91497 0.80422 1.04394 1.22108 0.92940 0.98423 0.98344 0.87269 1.23282 1.04353 0.89033 0.98269 1.24056 0.83464 0.97412 0.95627 1.88097 1.35839 1.25601 1.75467 1.23158 1.03747 0.80754 1.00878 1.21160 0.86792 0.76400 0.77383 1.93180 1.58032 1.70512 1.93892 1.93223 1.95337 1.95749 1.31189 1.93195 1.95089 1.42749 1.85252 1.23605 1.03717 0.98081 0.92635 1.21027 1.00637 0.90622 1.06290 1.20702 0.92759 0.97917 1.01769 1.20066 0.93719 0.95236 1.02337 1.25045 0.99576 1.01828 0.91288 1.86500 1.35734 1.96935 1.15417 0.94681 0.80855 0.76534 0.88640 1.20939 1.00452 0.90359 1.04756 0.87857 0.92576 0.92366 0.87333 0.87425 0.88769 0.90369 0.86359 0.88250 0.92765 0.87861 0.92551 0.88570 0.86716 0.84036 0.84935 0.86883 0.77296 1.17989 1.18184 0.84089 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 0.00 9.81 101.05 0.99 0.99 16 2 O -0.30 -1.13 10.28 -34.21 -0.35 -1.48 16 3 C 0.11 0.30 6.70 -39.12 -0.26 0.03 16 4 C 0.10 0.21 6.70 -39.13 -0.26 -0.06 16 5 O -0.28 -0.88 9.46 -47.40 -0.45 -1.32 16 6 C 0.07 -0.06 5.33 36.00 0.19 0.13 16 7 C 0.46 0.81 8.03 36.00 0.29 1.10 16 8 O -0.48 -2.76 16.25 -25.48 -0.41 -3.18 16 9 O -0.35 -0.02 10.22 -39.25 -0.40 -0.43 16 10 C 0.08 -0.04 5.05 37.16 0.19 0.14 16 11 C -0.10 0.26 4.21 -89.81 -0.38 -0.12 16 12 H 0.11 -0.41 8.14 -51.93 -0.42 -0.84 16 13 C -0.11 0.23 6.89 -25.93 -0.18 0.05 16 14 C 0.04 -0.03 0.84 -89.81 -0.08 -0.10 16 15 O -0.33 -0.17 8.37 -35.23 -0.29 -0.46 16 16 C 0.01 -0.01 10.30 101.05 1.04 1.03 16 17 C 0.44 0.36 2.52 37.16 0.09 0.45 16 18 F -0.17 -0.12 15.81 2.25 0.04 -0.08 16 19 F -0.17 -0.47 17.10 2.25 0.04 -0.43 16 20 F -0.18 -0.22 15.39 2.25 0.03 -0.18 16 21 C -0.14 0.40 6.51 -25.92 -0.17 0.23 16 22 C -0.17 0.14 9.04 -39.46 -0.36 -0.21 16 23 C -0.11 0.13 8.66 -39.57 -0.34 -0.21 16 24 C -0.11 0.02 5.39 -104.61 -0.56 -0.55 16 25 C -0.07 0.05 2.82 36.01 0.10 0.15 16 26 O -0.54 0.18 12.77 -35.23 -0.45 -0.27 16 27 Si 0.69 -1.20 29.78 -169.99 -5.06 -6.26 16 28 C -0.15 -0.15 8.60 -39.46 -0.34 -0.49 16 29 H 0.10 -0.15 8.14 -51.93 -0.42 -0.57 16 30 H 0.06 -0.06 7.66 -51.93 -0.40 -0.46 16 31 H 0.06 -0.07 7.66 -51.93 -0.40 -0.47 16 32 H 0.11 -0.42 7.66 -51.93 -0.40 -0.82 16 33 H 0.11 -0.37 7.66 -51.93 -0.40 -0.77 16 34 H 0.09 0.08 6.12 -51.93 -0.32 -0.24 16 35 H 0.08 -0.05 8.13 -51.93 -0.42 -0.48 16 36 H 0.12 -0.37 7.02 -51.93 -0.36 -0.73 16 37 H 0.10 -0.15 8.10 -51.93 -0.42 -0.57 16 38 H 0.05 -0.03 6.69 -51.93 -0.35 -0.38 16 39 H 0.10 -0.20 8.14 -51.93 -0.42 -0.62 16 40 H 0.06 -0.14 6.55 -51.93 -0.34 -0.48 16 41 H 0.10 -0.32 6.63 -51.93 -0.34 -0.66 16 42 H 0.11 -0.44 8.04 -51.93 -0.42 -0.86 16 43 H 0.14 -0.56 6.30 -52.49 -0.33 -0.89 16 44 H 0.13 -0.43 4.87 -52.48 -0.26 -0.69 16 45 H 0.11 -0.03 7.96 -51.93 -0.41 -0.45 16 46 H 0.38 -1.57 8.70 45.56 0.40 -1.17 16 47 H -0.25 -0.43 7.11 56.52 0.40 -0.02 16 48 H -0.26 -0.11 7.11 56.52 0.40 0.29 16 49 H 0.14 0.01 6.30 -52.49 -0.33 -0.32 16 LS Contribution 413.52 15.07 6.23 6.23 Total: 0.00 -10.42 413.52 -7.08 -17.50 By element: Atomic # 1 Polarization: -6.24 SS G_CDS: -5.96 Total: -12.20 kcal Atomic # 6 Polarization: 2.60 SS G_CDS: -0.03 Total: 2.57 kcal Atomic # 8 Polarization: -4.78 SS G_CDS: -2.36 Total: -7.14 kcal Atomic # 9 Polarization: -0.81 SS G_CDS: 0.11 Total: -0.70 kcal Atomic # 14 Polarization: -1.20 SS G_CDS: -5.06 Total: -6.26 kcal Total LS contribution 6.23 Total: 6.23 kcal Total: -10.42 -7.08 -17.50 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_1458_471980_17321610.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -288.930 kcal (2) G-P(sol) polarization free energy of solvation -10.424 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -299.354 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.078 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.502 kcal (6) G-S(sol) free energy of system = (1) + (5) -306.432 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.18 seconds