Wall clock time and date at job start Tue Mar 9 2021 18:11:28 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53004 * 1 3 3 C 1.52998 * 109.46914 * 2 1 4 4 C 1.52998 * 109.47191 * 240.00012 * 2 1 3 5 5 O 1.42898 * 109.47047 * 119.99803 * 2 1 3 6 6 C 1.42902 * 114.00236 * 60.00118 * 5 2 1 7 7 H 1.09000 * 112.84679 * 18.80041 * 6 5 2 8 8 C 1.53777 * 113.61325 * 149.99771 * 6 5 2 9 9 C 1.53783 * 87.07958 * 140.06750 * 8 6 5 10 10 H 1.09001 * 113.61456 * 89.19907 * 9 8 6 11 11 C 1.52998 * 113.61480 * 220.01632 * 9 8 6 12 12 O 1.45202 * 109.47577 * 184.99596 * 11 9 8 13 13 C 1.34224 * 117.00628 * 179.97438 * 12 11 9 14 14 O 1.20830 * 119.99728 * 0.02562 * 13 12 11 15 15 C 1.50700 * 120.00279 * 180.02562 * 13 12 11 16 16 F 1.39898 * 109.46923 * 60.00241 * 15 13 12 17 17 F 1.39900 * 109.47291 * 300.00354 * 15 13 12 18 18 O 1.42901 * 109.47075 * 179.97438 * 15 13 12 19 19 C 1.35897 * 117.00049 * 180.02562 * 18 15 13 20 20 C 1.38707 * 120.05728 * 180.02562 * 19 18 15 21 21 C 1.38172 * 119.94457 * 180.02562 * 20 19 18 22 22 C 1.50696 * 119.97101 * 179.97438 * 21 20 19 23 23 O 1.42898 * 109.46949 * 64.98112 * 22 21 20 24 24 Si 1.86300 * 109.47178 * 184.97899 * 22 21 20 25 25 C 1.38241 * 120.05236 * 359.97438 * 21 20 19 26 26 C 1.38288 * 120.11556 * 359.97438 * 25 21 20 27 27 C 1.38119 * 120.05366 * 0.28328 * 26 25 21 28 28 C 1.53777 * 113.69124 * 247.53593 * 6 5 2 29 29 H 1.09000 * 109.46761 * 300.00124 * 1 2 3 30 30 H 1.08992 * 109.47258 * 60.00218 * 1 2 3 31 31 H 1.09001 * 109.47183 * 180.02562 * 1 2 3 32 32 H 1.09000 * 109.47088 * 180.02562 * 3 2 1 33 33 H 1.09000 * 109.47118 * 299.99628 * 3 2 1 34 34 H 1.09000 * 109.47508 * 60.00334 * 3 2 1 35 35 H 1.09001 * 109.46714 * 299.99867 * 4 2 1 36 36 H 1.08997 * 109.47245 * 59.99269 * 4 2 1 37 37 H 1.09000 * 109.47127 * 179.97438 * 4 2 1 38 38 H 1.09001 * 113.61759 * 25.51800 * 8 6 5 39 39 H 1.09005 * 113.68956 * 254.62243 * 8 6 5 40 40 H 1.09009 * 109.46969 * 64.99948 * 11 9 8 41 41 H 1.08999 * 109.47287 * 305.00289 * 11 9 8 42 42 H 1.07998 * 120.02676 * 0.04220 * 20 19 18 43 43 H 1.09000 * 109.47732 * 304.98426 * 22 21 20 44 44 H 0.96700 * 114.00504 * 60.00043 * 23 22 21 45 45 H 1.48502 * 109.99699 * 58.68387 * 24 22 21 46 46 H 1.48498 * 110.00216 * 180.02562 * 24 22 21 47 47 H 1.08006 * 119.93966 * 180.02562 * 25 21 20 48 48 H 1.08002 * 119.96980 * 179.97438 * 26 25 21 49 49 H 1.07998 * 120.02956 * 179.72220 * 27 26 25 50 50 H 1.09002 * 113.61760 * 105.45496 * 28 6 5 51 51 H 1.09004 * 113.61416 * 334.55068 * 28 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 6 2.0401 -0.7212 -1.2492 5 8 2.0063 -0.6736 1.1668 6 6 1.5847 -2.0355 1.2646 7 1 1.2523 -2.4451 0.3108 8 6 2.5838 -2.9377 2.0079 9 6 1.3667 -3.6133 2.6616 10 1 0.9756 -4.4553 2.0904 11 6 1.5702 -3.9429 4.1417 12 8 0.4207 -4.6796 4.6361 13 6 0.4419 -5.0479 5.9266 14 8 1.3895 -4.7637 6.6205 15 6 -0.7160 -5.8158 6.5102 16 9 -0.8727 -7.0210 5.8174 17 9 -1.8850 -5.0561 6.3948 18 8 -0.4594 -6.0896 7.8891 19 6 -1.4120 -6.7807 8.5686 20 6 -1.2285 -7.0805 9.9104 21 6 -2.1983 -7.7838 10.5988 22 6 -1.9993 -8.1104 12.0564 23 8 -1.9730 -6.9005 12.8163 24 14 -3.4007 -9.1854 12.6489 25 6 -3.3510 -8.1880 9.9515 26 6 -3.5368 -7.8894 8.6141 27 6 -2.5680 -7.1913 7.9202 28 6 0.6069 -2.2980 2.4220 29 1 -0.3633 0.5139 0.8900 30 1 -0.3633 0.5138 -0.8899 31 1 -0.3633 -1.0277 0.0005 32 1 3.1300 1.4425 -0.0005 33 1 1.6767 1.9563 -0.8900 34 1 1.6767 1.9564 0.8900 35 1 1.6767 -1.7489 -1.2491 36 1 1.6766 -0.2075 -2.1392 37 1 3.1300 -0.7208 -1.2494 38 1 3.2162 -2.3998 2.7142 39 1 3.1497 -3.5986 1.3512 40 1 1.6799 -3.0180 4.7081 41 1 2.4683 -4.5493 4.2589 42 1 -0.3284 -6.7643 10.4166 43 1 -1.0555 -8.6404 12.1846 44 1 -2.7827 -6.3762 12.7494 45 1 -3.4586 -10.4329 11.8454 46 1 -3.2166 -9.5141 14.0853 47 1 -4.1081 -8.7373 10.4916 48 1 -4.4381 -8.2067 8.1107 49 1 -2.7115 -6.9622 6.8746 50 1 -0.4240 -2.4419 2.0986 51 1 0.6989 -1.5852 3.2415 There are 72 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 72 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_1458_5054142_14598394.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 18:11:28 Heat of formation + Delta-G solvation = -234.399746 kcal Electronic energy + Delta-G solvation = -36095.465495 eV Core-core repulsion = 30792.504874 eV Total energy + Delta-G solvation = -5302.960621 eV No. of doubly occupied orbitals = 72 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 387.167 amu Computer time = 1.05 seconds Orbital eigenvalues (eV) -50.86393 -48.86341 -42.00994 -41.36489 -40.90234 -39.37873 -38.69486 -37.71053 -37.32982 -33.97202 -32.63528 -31.92327 -30.48688 -28.74291 -28.45117 -28.20729 -27.02209 -26.76593 -24.31476 -23.91771 -23.34817 -22.33020 -20.99392 -20.86307 -20.42372 -19.77495 -19.65377 -18.75614 -18.17080 -17.84134 -17.62261 -17.49574 -17.36444 -16.74033 -16.35214 -16.32066 -16.02040 -15.96173 -15.81541 -15.56084 -15.32490 -15.25827 -15.08614 -14.93244 -14.87302 -14.68491 -14.40982 -14.29383 -14.14085 -14.07194 -13.59134 -13.42002 -13.33863 -13.13186 -13.12095 -13.01376 -12.89317 -12.81893 -12.72996 -12.58153 -12.40505 -12.15964 -12.04065 -12.00174 -11.81695 -11.74859 -11.47642 -11.30324 -10.55539 -10.42891 -10.08182 -9.65905 -5.07620 -0.00211 0.00334 0.15850 0.32287 1.21376 1.59252 1.62455 1.94138 1.94914 2.45645 2.55832 2.77380 3.16099 3.29090 3.37417 3.39095 3.51402 3.57552 3.63529 3.64305 3.82472 3.86672 3.87216 3.93295 3.99925 4.00924 4.04195 4.08522 4.14136 4.31856 4.36460 4.45904 4.50663 4.56899 4.63101 4.66508 4.70246 4.72475 4.78461 4.79076 4.82711 4.85770 4.90052 4.95337 5.01795 5.05432 5.14856 5.20106 5.24836 5.24933 5.29789 5.32097 5.83563 5.95061 6.33984 6.51632 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.177 4.177 2 C 0.105 3.895 3 C -0.139 4.139 4 C -0.179 4.179 5 O -0.360 6.360 6 C 0.063 3.937 7 H 0.094 0.906 8 C -0.125 4.125 9 C -0.113 4.113 10 H 0.109 0.891 11 C 0.079 3.921 12 O -0.329 6.329 13 C 0.463 3.537 14 O -0.433 6.433 15 C 0.468 3.532 16 F -0.164 7.164 17 F -0.163 7.163 18 O -0.287 6.287 19 C 0.101 3.899 20 C -0.099 4.099 21 C -0.085 4.085 22 C -0.070 4.070 23 O -0.537 6.537 24 Si 0.692 3.308 25 C -0.135 4.135 26 C -0.073 4.073 27 C -0.185 4.185 28 C -0.151 4.151 29 H 0.065 0.935 30 H 0.066 0.934 31 H 0.058 0.942 32 H 0.064 0.936 33 H 0.071 0.929 34 H 0.064 0.936 35 H 0.059 0.941 36 H 0.068 0.932 37 H 0.065 0.935 38 H 0.096 0.904 39 H 0.081 0.919 40 H 0.085 0.915 41 H 0.085 0.915 42 H 0.141 0.859 43 H 0.117 0.883 44 H 0.380 0.620 45 H -0.256 1.256 46 H -0.253 1.253 47 H 0.135 0.865 48 H 0.139 0.861 49 H 0.136 0.864 50 H 0.075 0.925 51 H 0.093 0.907 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.704 0.709 -4.055 5.538 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.234 4.234 2 C 0.066 3.934 3 C -0.196 4.196 4 C -0.237 4.237 5 O -0.280 6.280 6 C 0.005 3.995 7 H 0.112 0.888 8 C -0.163 4.163 9 C -0.132 4.132 10 H 0.128 0.872 11 C 0.006 3.994 12 O -0.246 6.246 13 C 0.297 3.703 14 O -0.315 6.315 15 C 0.393 3.607 16 F -0.145 7.145 17 F -0.145 7.145 18 O -0.205 6.205 19 C 0.058 3.942 20 C -0.118 4.118 21 C -0.086 4.086 22 C -0.181 4.181 23 O -0.342 6.342 24 Si 0.594 3.406 25 C -0.152 4.152 26 C -0.091 4.091 27 C -0.204 4.204 28 C -0.188 4.188 29 H 0.084 0.916 30 H 0.085 0.915 31 H 0.077 0.923 32 H 0.083 0.917 33 H 0.090 0.910 34 H 0.083 0.917 35 H 0.078 0.922 36 H 0.087 0.913 37 H 0.084 0.916 38 H 0.115 0.885 39 H 0.099 0.901 40 H 0.103 0.897 41 H 0.103 0.897 42 H 0.159 0.841 43 H 0.135 0.865 44 H 0.228 0.772 45 H -0.181 1.181 46 H -0.178 1.178 47 H 0.152 0.848 48 H 0.156 0.844 49 H 0.154 0.846 50 H 0.094 0.906 51 H 0.111 0.889 Dipole moment (debyes) X Y Z Total from point charges -2.740 -0.011 -3.192 4.207 hybrid contribution 0.232 -0.163 -0.756 0.807 sum -2.509 -0.174 -3.948 4.681 Atomic orbital electron populations 1.22472 0.95415 1.02533 1.02978 1.21551 0.93273 0.93293 0.85313 1.21772 1.02033 0.93181 1.02661 1.22473 1.02353 1.00840 0.97998 1.88040 1.73781 1.23144 1.42987 1.23536 0.95408 0.82990 0.97601 0.88807 1.23242 0.96191 0.97319 0.99531 1.22416 0.99301 0.98510 0.92934 0.87240 1.23460 0.85427 0.95964 0.94517 1.86503 1.46853 1.67074 1.24140 1.22030 0.86341 0.79294 0.82592 1.90839 1.32145 1.48236 1.60273 1.20470 0.81310 0.78046 0.80916 1.93228 1.95516 1.46297 1.79506 1.93231 1.49955 1.75715 1.95555 1.86618 1.43739 1.71142 1.19001 1.18906 0.88218 0.94884 0.92173 1.20270 1.01084 1.00314 0.90122 1.20205 0.93989 0.97860 0.96541 1.25145 1.10771 0.94043 0.88120 1.86531 1.43645 1.34695 1.69370 0.94685 0.85225 0.80581 0.80155 1.21059 0.97174 1.01719 0.95296 1.20948 0.98468 0.95850 0.93794 1.21635 0.94356 1.03060 1.01327 1.23673 0.99292 0.96011 0.99847 0.91641 0.91487 0.92277 0.91740 0.91030 0.91730 0.92222 0.91314 0.91575 0.88532 0.90052 0.89673 0.89716 0.84086 0.86538 0.77222 1.18078 1.17759 0.84816 0.84366 0.84589 0.90602 0.88864 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 0.18 8.38 37.16 0.31 0.49 16 2 C 0.10 -0.03 1.11 -90.62 -0.10 -0.13 16 3 C -0.14 0.09 8.84 37.16 0.33 0.41 16 4 C -0.18 0.21 8.38 37.16 0.31 0.53 16 5 O -0.36 -0.38 10.00 -35.23 -0.35 -0.73 16 6 C 0.06 -0.06 2.81 -25.92 -0.07 -0.13 16 7 H 0.09 -0.17 5.54 -51.93 -0.29 -0.46 16 8 C -0.13 0.22 7.47 -25.92 -0.19 0.02 16 9 C -0.11 0.20 4.02 -89.81 -0.36 -0.16 16 10 H 0.11 -0.26 8.14 -51.93 -0.42 -0.68 16 11 C 0.08 -0.04 5.30 37.16 0.20 0.15 16 12 O -0.33 -0.39 10.22 -39.24 -0.40 -0.79 16 13 C 0.46 1.24 7.47 36.01 0.27 1.51 16 14 O -0.43 -2.05 16.25 -25.48 -0.41 -2.47 16 15 C 0.47 1.16 2.16 36.01 0.08 1.24 16 16 F -0.16 -0.34 15.27 2.25 0.03 -0.31 16 17 F -0.16 -0.33 15.31 2.25 0.03 -0.30 16 18 O -0.29 -1.05 9.60 -39.37 -0.38 -1.43 16 19 C 0.10 0.27 6.48 -39.22 -0.25 0.02 16 20 C -0.10 -0.19 9.62 -39.43 -0.38 -0.57 16 21 C -0.09 -0.03 5.35 -104.65 -0.56 -0.59 16 22 C -0.07 0.02 2.80 36.00 0.10 0.12 16 23 O -0.54 -0.13 12.83 -35.23 -0.45 -0.58 16 24 Si 0.69 -1.01 29.80 -169.99 -5.07 -6.07 16 25 C -0.13 0.11 8.67 -39.56 -0.34 -0.24 16 26 C -0.07 0.03 10.04 -39.61 -0.40 -0.37 16 27 C -0.19 -0.25 8.26 -39.43 -0.33 -0.57 16 28 C -0.15 0.17 7.47 -25.92 -0.19 -0.02 16 29 H 0.06 -0.03 8.14 -51.93 -0.42 -0.45 16 30 H 0.07 -0.11 8.14 -51.93 -0.42 -0.53 16 31 H 0.06 -0.08 7.02 -51.93 -0.36 -0.44 16 32 H 0.06 -0.02 8.14 -51.93 -0.42 -0.44 16 33 H 0.07 -0.12 8.14 -51.93 -0.42 -0.55 16 34 H 0.06 -0.01 8.14 -51.93 -0.42 -0.44 16 35 H 0.06 -0.10 6.24 -51.93 -0.32 -0.42 16 36 H 0.07 -0.13 8.14 -51.93 -0.42 -0.55 16 37 H 0.07 -0.05 8.14 -51.93 -0.42 -0.47 16 38 H 0.10 -0.12 8.10 -51.93 -0.42 -0.54 16 39 H 0.08 -0.21 8.14 -51.93 -0.42 -0.63 16 40 H 0.09 -0.05 7.84 -51.92 -0.41 -0.46 16 41 H 0.08 -0.09 8.13 -51.93 -0.42 -0.52 16 42 H 0.14 0.26 8.06 -52.49 -0.42 -0.16 16 43 H 0.12 0.01 7.96 -51.93 -0.41 -0.41 16 44 H 0.38 -1.41 8.70 45.56 0.40 -1.02 16 45 H -0.26 -0.21 7.11 56.52 0.40 0.19 16 46 H -0.25 -0.47 7.11 56.52 0.40 -0.07 16 47 H 0.13 -0.42 4.90 -52.48 -0.26 -0.68 16 48 H 0.14 -0.40 8.06 -52.49 -0.42 -0.82 16 49 H 0.14 0.11 5.10 -52.49 -0.27 -0.16 16 50 H 0.08 -0.11 8.14 -51.93 -0.42 -0.53 16 51 H 0.09 -0.04 7.90 -51.93 -0.41 -0.45 16 LS Contribution 423.12 15.07 6.38 6.38 Total: 0.00 -6.60 423.12 -9.65 -16.25 By element: Atomic # 1 Polarization: -4.22 SS G_CDS: -7.45 Total: -11.67 kcal Atomic # 6 Polarization: 3.30 SS G_CDS: -1.59 Total: 1.71 kcal Atomic # 8 Polarization: -4.00 SS G_CDS: -2.00 Total: -6.00 kcal Atomic # 9 Polarization: -0.67 SS G_CDS: 0.07 Total: -0.60 kcal Atomic # 14 Polarization: -1.01 SS G_CDS: -5.07 Total: -6.07 kcal Total LS contribution 6.38 Total: 6.38 kcal Total: -6.60 -9.65 -16.25 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_1458_5054142_14598394.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -218.149 kcal (2) G-P(sol) polarization free energy of solvation -6.598 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -224.747 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.653 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.251 kcal (6) G-S(sol) free energy of system = (1) + (5) -234.400 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.05 seconds