Wall clock time and date at job start Tue Mar 9 2021 18:17:37 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42898 * 1 3 3 Si 1.86298 * 109.47432 * 2 1 4 4 C 1.50701 * 109.46850 * 119.99871 * 2 1 3 5 5 C 1.38243 * 119.94144 * 245.01900 * 4 2 1 6 6 C 1.38180 * 120.07131 * 179.74318 * 5 4 2 7 7 C 1.38684 * 119.95582 * 0.53537 * 6 5 4 8 8 O 1.35919 * 120.05821 * 179.71841 * 7 6 5 9 9 C 1.42896 * 117.00111 * 359.72694 * 8 7 6 10 10 C 1.50703 * 109.46776 * 179.97438 * 9 8 7 11 11 O 1.20825 * 120.00247 * 0.02562 * 10 9 8 12 12 O 1.34229 * 119.99563 * 179.97438 * 10 9 8 13 13 C 1.45202 * 116.99732 * 179.97438 * 12 10 9 14 14 C 1.52997 * 109.47114 * 179.97438 * 13 12 10 15 15 H 1.09005 * 112.85079 * 316.19725 * 14 13 12 16 16 C 1.54052 * 113.61963 * 87.50804 * 14 13 12 17 17 C 1.53781 * 86.98687 * 139.97823 * 16 14 13 18 18 H 1.09002 * 113.61445 * 89.16393 * 17 16 14 19 19 O 1.42905 * 113.61505 * 219.98264 * 17 16 14 20 20 C 1.53783 * 113.61545 * 185.00528 * 14 13 12 21 21 C 1.38830 * 119.87804 * 359.44448 * 7 6 5 22 22 Br 1.89096 * 120.03577 * 180.29769 * 21 7 6 23 23 C 1.38197 * 119.92937 * 0.27957 * 21 7 6 24 24 H 0.96707 * 113.99277 * 60.00109 * 1 2 3 25 25 H 1.09004 * 109.47510 * 239.99630 * 2 1 3 26 26 H 1.48509 * 110.00040 * 298.67948 * 3 2 1 27 27 H 1.48499 * 110.00119 * 59.99523 * 3 2 1 28 28 H 1.08001 * 119.96319 * 0.02562 * 5 4 2 29 29 H 1.08007 * 120.02588 * 180.25271 * 6 5 4 30 30 H 1.09004 * 109.46962 * 60.00378 * 9 8 7 31 31 H 1.08996 * 109.47097 * 299.99802 * 9 8 7 32 32 H 1.09006 * 109.46657 * 60.00409 * 13 12 10 33 33 H 1.08999 * 109.47306 * 300.00275 * 13 12 10 34 34 H 1.08999 * 113.60931 * 25.47201 * 16 14 13 35 35 H 1.08998 * 113.69722 * 254.49284 * 16 14 13 36 36 H 0.96699 * 113.99826 * 279.13770 * 19 17 16 37 37 H 1.08992 * 113.61796 * 105.46955 * 20 14 13 38 38 H 1.09000 * 113.61157 * 334.56375 * 20 14 13 39 39 H 1.08000 * 119.97562 * 179.97438 * 23 21 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9312 -0.7104 1.2305 5 6 2.6382 -0.0110 2.1908 6 6 3.0954 -0.6585 3.3226 7 6 2.8543 -2.0139 3.4900 8 8 3.3080 -2.6542 4.5998 9 6 4.0315 -1.8704 5.5507 10 6 4.4510 -2.7431 6.7055 11 8 4.1607 -3.9159 6.7131 12 8 5.1481 -2.2175 7.7251 13 6 5.5180 -3.1168 8.8035 14 6 6.3020 -2.3438 9.8659 15 1 7.0482 -1.6744 9.4378 16 6 5.4084 -1.6760 10.9283 17 6 6.4624 -2.1005 11.9645 18 1 7.2521 -1.3636 12.1111 19 8 5.9017 -2.5652 13.1941 20 6 6.8475 -3.2319 10.9966 21 6 2.1438 -2.7144 2.5246 22 35 1.8053 -4.5608 2.7523 23 6 1.6838 -2.0607 1.3972 24 1 -0.3932 0.4417 -0.7651 25 1 1.7924 -0.5139 -0.8900 26 1 1.5880 2.4586 -1.2243 27 1 1.5615 2.4679 1.2084 28 1 2.8294 1.0437 2.0584 29 1 3.6441 -0.1104 4.0743 30 1 3.3950 -1.0649 5.9170 31 1 4.9159 -1.4469 5.0748 32 1 6.1381 -3.9216 8.4088 33 1 4.6174 -3.5377 9.2506 34 1 4.4444 -2.1675 11.0595 35 1 5.3214 -0.5958 10.8114 36 1 5.6360 -1.8577 13.7973 37 1 7.9215 -3.4069 10.9348 38 1 6.2763 -4.1480 11.1465 39 1 1.1314 -2.6049 0.6456 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_1458_6201216_11354868.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 18:17:37 Heat of formation + Delta-G solvation = -132.738015 kcal Electronic energy + Delta-G solvation = -24609.667776 eV Core-core repulsion = 20532.355963 eV Total energy + Delta-G solvation = -4077.311813 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 373.034 amu Computer time = 0.53 seconds Orbital eigenvalues (eV) -41.93803 -41.27142 -40.31938 -39.29082 -37.67146 -37.32609 -36.04198 -33.65555 -32.17381 -31.03374 -30.24151 -29.05774 -26.87852 -26.43139 -24.38498 -23.52187 -22.45422 -21.98483 -20.69551 -19.78853 -18.76730 -18.63652 -18.45285 -18.10760 -17.94566 -16.96178 -16.88782 -16.82222 -16.44866 -15.86618 -15.68406 -15.44280 -15.12347 -14.66861 -14.57657 -14.32362 -14.00744 -13.89972 -13.70446 -13.58165 -13.50088 -12.89803 -12.69393 -12.52474 -12.42887 -12.23820 -12.17871 -11.86271 -11.78796 -11.75940 -11.49027 -11.32257 -11.05764 -10.85744 -10.58983 -9.96898 -9.35759 -5.07417 -0.08936 0.06317 0.69446 0.87326 1.04003 1.17972 1.49208 1.85115 2.22943 2.30329 3.05121 3.19758 3.27497 3.36337 3.43401 3.51681 3.58267 3.70866 3.71410 3.77074 3.79730 3.82301 4.01469 4.05817 4.13291 4.17399 4.33568 4.39086 4.52496 4.56171 4.64818 4.65303 4.75404 4.83643 4.90573 4.97805 5.18524 5.19643 5.30933 5.38305 5.91187 6.34823 6.60578 6.62212 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.535 6.535 2 C -0.073 4.073 3 Si 0.683 3.317 4 C -0.103 4.103 5 C -0.058 4.058 6 C -0.198 4.198 7 C 0.160 3.840 8 O -0.280 6.280 9 C 0.066 3.934 10 C 0.463 3.537 11 O -0.476 6.476 12 O -0.352 6.352 13 C 0.081 3.919 14 C -0.111 4.111 15 H 0.108 0.892 16 C -0.165 4.165 17 C 0.076 3.924 18 H 0.086 0.914 19 O -0.560 6.560 20 C -0.120 4.120 21 C -0.121 4.121 22 Br -0.025 7.025 23 C -0.023 4.023 24 H 0.381 0.619 25 H 0.079 0.921 26 H -0.259 1.259 27 H -0.254 1.254 28 H 0.138 0.862 29 H 0.144 0.856 30 H 0.111 0.889 31 H 0.112 0.888 32 H 0.078 0.922 33 H 0.077 0.923 34 H 0.092 0.908 35 H 0.075 0.925 36 H 0.381 0.619 37 H 0.082 0.918 38 H 0.095 0.905 39 H 0.143 0.857 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.237 6.493 -0.837 7.798 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.343 6.343 2 C -0.182 4.182 3 Si 0.584 3.416 4 C -0.104 4.104 5 C -0.076 4.076 6 C -0.218 4.218 7 C 0.113 3.887 8 O -0.192 6.192 9 C -0.011 4.011 10 C 0.303 3.697 11 O -0.361 6.361 12 O -0.269 6.269 13 C 0.008 3.992 14 C -0.129 4.129 15 H 0.126 0.874 16 C -0.203 4.203 17 C 0.017 3.983 18 H 0.103 0.897 19 O -0.366 6.366 20 C -0.158 4.158 21 C -0.201 4.201 22 Br 0.061 6.939 23 C -0.043 4.043 24 H 0.230 0.770 25 H 0.097 0.903 26 H -0.184 1.184 27 H -0.178 1.178 28 H 0.155 0.845 29 H 0.162 0.838 30 H 0.128 0.872 31 H 0.130 0.870 32 H 0.096 0.904 33 H 0.095 0.905 34 H 0.110 0.890 35 H 0.094 0.906 36 H 0.228 0.772 37 H 0.101 0.899 38 H 0.114 0.886 39 H 0.161 0.839 Dipole moment (debyes) X Y Z Total from point charges 4.017 5.143 -0.360 6.536 hybrid contribution -1.115 0.891 -0.294 1.457 sum 2.902 6.035 -0.654 6.728 Atomic orbital electron populations 1.86601 1.17641 1.80172 1.49869 1.24747 0.84630 1.10952 0.97879 0.95127 0.91490 0.74431 0.80524 1.19160 1.01180 0.93465 0.96571 1.20923 0.95024 0.99658 0.92008 1.21169 1.06921 0.92695 1.00972 1.18541 0.93436 0.90713 0.86054 1.86204 1.68245 1.36318 1.28475 1.21955 0.98852 0.92595 0.87663 1.22756 0.76234 0.87559 0.83124 1.90775 1.50540 1.17183 1.77569 1.86411 1.66606 1.43839 1.30078 1.23168 0.99726 0.91499 0.84800 1.22433 0.98855 0.99021 0.92620 0.87374 1.23856 0.99066 1.01617 0.95765 1.23285 0.95189 0.96703 0.83088 0.89671 1.86533 1.83109 1.37478 1.29434 1.23070 1.02146 0.98171 0.92366 1.21114 1.07858 0.93145 0.98009 1.96808 1.94758 1.04765 1.97602 1.20859 0.94971 0.93677 0.94765 0.77045 0.90287 1.18425 1.17828 0.84452 0.83819 0.87156 0.86998 0.90401 0.90470 0.88992 0.90616 0.77153 0.89926 0.88645 0.83876 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.21 12.81 -35.23 -0.45 -0.66 16 2 C -0.07 0.08 2.79 36.01 0.10 0.18 16 3 Si 0.68 -1.46 29.85 -169.99 -5.07 -6.53 16 4 C -0.10 -0.03 5.38 -104.60 -0.56 -0.59 16 5 C -0.06 0.05 8.66 -39.60 -0.34 -0.29 16 6 C -0.20 0.21 9.04 -39.44 -0.36 -0.15 16 7 C 0.16 0.25 6.68 -39.20 -0.26 -0.02 16 8 O -0.28 -0.64 9.01 -39.44 -0.36 -0.99 16 9 C 0.07 -0.08 5.33 36.01 0.19 0.11 16 10 C 0.46 0.74 8.03 36.01 0.29 1.03 16 11 O -0.48 -2.66 16.25 -25.48 -0.41 -3.08 16 12 O -0.35 -0.12 10.22 -39.25 -0.40 -0.52 16 13 C 0.08 -0.01 5.30 37.16 0.20 0.18 16 14 C -0.11 0.19 4.03 -89.66 -0.36 -0.17 16 15 H 0.11 -0.28 8.14 -51.93 -0.42 -0.70 16 16 C -0.17 0.26 7.48 -25.78 -0.19 0.07 16 17 C 0.08 -0.10 5.20 -25.92 -0.13 -0.23 16 18 H 0.09 -0.23 8.14 -51.93 -0.42 -0.66 16 19 O -0.56 -0.15 13.67 -35.23 -0.48 -0.64 16 20 C -0.12 0.15 7.47 -25.92 -0.19 -0.04 16 21 C -0.12 -0.31 6.24 -39.38 -0.25 -0.56 16 22 Br -0.02 -0.09 33.16 -68.01 -2.26 -2.35 16 23 C -0.02 -0.03 9.42 -39.58 -0.37 -0.41 16 24 H 0.38 -1.35 8.74 45.56 0.40 -0.95 16 25 H 0.08 -0.22 7.96 -51.93 -0.41 -0.63 16 26 H -0.26 -0.03 7.11 56.52 0.40 0.37 16 27 H -0.25 -0.18 7.05 56.52 0.40 0.22 16 28 H 0.14 -0.42 4.86 -52.49 -0.26 -0.68 16 29 H 0.14 -0.61 6.30 -52.48 -0.33 -0.94 16 30 H 0.11 -0.42 7.65 -51.93 -0.40 -0.82 16 31 H 0.11 -0.47 7.67 -51.93 -0.40 -0.87 16 32 H 0.08 -0.01 8.13 -51.93 -0.42 -0.43 16 33 H 0.08 0.03 7.84 -51.93 -0.41 -0.37 16 34 H 0.09 -0.06 7.90 -51.93 -0.41 -0.47 16 35 H 0.08 -0.17 8.14 -51.93 -0.42 -0.59 16 36 H 0.38 -1.42 9.12 45.56 0.42 -1.01 16 37 H 0.08 -0.17 8.14 -51.93 -0.42 -0.60 16 38 H 0.10 -0.03 8.10 -51.93 -0.42 -0.45 16 39 H 0.14 0.10 8.06 -52.49 -0.42 -0.32 16 LS Contribution 355.08 15.07 5.35 5.35 Total: 0.00 -9.91 355.08 -10.28 -20.19 By element: Atomic # 1 Polarization: -5.94 SS G_CDS: -3.96 Total: -9.89 kcal Atomic # 6 Polarization: 1.36 SS G_CDS: -2.25 Total: -0.89 kcal Atomic # 8 Polarization: -3.78 SS G_CDS: -2.10 Total: -5.88 kcal Atomic # 14 Polarization: -1.46 SS G_CDS: -5.07 Total: -6.53 kcal Atomic # 35 Polarization: -0.09 SS G_CDS: -2.26 Total: -2.35 kcal Total LS contribution 5.35 Total: 5.35 kcal Total: -9.91 -10.28 -20.19 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_1458_6201216_11354868.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -112.547 kcal (2) G-P(sol) polarization free energy of solvation -9.908 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -122.455 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.283 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.191 kcal (6) G-S(sol) free energy of system = (1) + (5) -132.738 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.53 seconds