Wall clock time and date at job start Tue Mar 9 2021 18:17:44 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53006 * 1 3 3 C 1.52993 * 109.47285 * 2 1 4 4 C 1.53006 * 109.46902 * 239.99993 * 2 1 3 5 5 O 1.42900 * 109.46973 * 120.00215 * 2 1 3 6 6 C 1.42901 * 113.99967 * 60.00061 * 5 2 1 7 7 H 1.09006 * 112.90875 * 341.24847 * 6 5 2 8 8 C 1.53777 * 113.61659 * 112.50204 * 6 5 2 9 9 C 1.53787 * 87.08243 * 139.97806 * 8 6 5 10 10 H 1.08994 * 113.68617 * 89.12676 * 9 8 6 11 11 C 1.52992 * 113.61482 * 220.02193 * 9 8 6 12 12 O 1.45206 * 109.46986 * 272.49894 * 11 9 8 13 13 C 1.34232 * 116.99708 * 180.02562 * 12 11 9 14 14 O 1.20830 * 120.00392 * 359.97438 * 13 12 11 15 15 C 1.50702 * 119.99752 * 179.97438 * 13 12 11 16 16 O 1.42902 * 109.46994 * 179.97438 * 15 13 12 17 17 C 1.35921 * 116.99614 * 180.02562 * 16 15 13 18 18 C 1.38790 * 120.05672 * 179.97438 * 17 16 15 19 19 Br 1.89101 * 120.03758 * 0.02562 * 18 17 16 20 20 C 1.38235 * 119.93111 * 180.02562 * 18 17 16 21 21 C 1.38248 * 120.04219 * 359.97438 * 20 18 17 22 22 C 1.50693 * 119.94191 * 179.97438 * 21 20 18 23 23 O 1.42907 * 109.47661 * 300.00763 * 22 21 20 24 24 Si 1.86298 * 109.47618 * 180.02562 * 22 21 20 25 25 C 1.38285 * 120.12000 * 0.28397 * 21 20 18 26 26 C 1.38147 * 120.06930 * 359.48249 * 25 21 20 27 27 C 1.53782 * 87.07974 * 334.57006 * 9 8 6 28 28 H 1.08998 * 109.47189 * 300.00316 * 1 2 3 29 29 H 1.09009 * 109.46820 * 60.00252 * 1 2 3 30 30 H 1.08997 * 109.47278 * 179.97438 * 1 2 3 31 31 H 1.08996 * 109.47775 * 179.97438 * 3 2 1 32 32 H 1.09008 * 109.47407 * 299.99973 * 3 2 1 33 33 H 1.08998 * 109.47265 * 59.99731 * 3 2 1 34 34 H 1.08995 * 109.46963 * 299.99961 * 4 2 1 35 35 H 1.08998 * 109.47112 * 60.00303 * 4 2 1 36 36 H 1.08997 * 109.46337 * 180.02562 * 4 2 1 37 37 H 1.09004 * 113.60915 * 25.43573 * 8 6 5 38 38 H 1.08996 * 113.62014 * 254.52899 * 8 6 5 39 39 H 1.08995 * 109.47371 * 152.50024 * 11 9 8 40 40 H 1.09000 * 109.47775 * 32.49736 * 11 9 8 41 41 H 1.09007 * 109.47059 * 60.00395 * 15 13 12 42 42 H 1.08998 * 109.47221 * 300.00570 * 15 13 12 43 43 H 1.07996 * 119.98159 * 180.02562 * 20 18 17 44 44 H 1.09000 * 109.46936 * 60.00386 * 22 21 20 45 45 H 0.96697 * 114.00527 * 179.97438 * 23 22 21 46 46 H 1.48506 * 109.99834 * 298.68714 * 24 22 21 47 47 H 1.48502 * 110.00011 * 59.99978 * 24 22 21 48 48 H 1.07993 * 119.96394 * 179.74210 * 25 21 20 49 49 H 1.07994 * 120.02327 * 180.23595 * 26 25 21 50 50 H 1.08998 * 113.61356 * 139.98131 * 27 9 8 51 51 H 1.09003 * 113.61602 * 270.88369 * 27 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5301 0.0000 0.0000 3 6 2.0401 1.4424 0.0000 4 6 2.0400 -0.7213 -1.2493 5 8 2.0064 -0.6737 1.1668 6 6 1.5847 -2.0356 1.2644 7 1 0.7241 -2.2596 0.6339 8 6 2.7333 -3.0479 1.1212 9 6 2.0561 -3.8558 2.2409 10 1 1.3244 -4.5779 1.8787 11 6 3.0418 -4.4603 3.2427 12 8 3.4833 -5.7582 2.7643 13 6 4.3569 -6.4264 3.5338 14 8 4.7405 -5.9425 4.5725 15 6 4.8594 -7.7800 3.1023 16 8 5.7719 -8.2833 4.0802 17 6 6.3212 -9.5034 3.8413 18 6 7.2160 -10.0527 4.7490 19 35 7.6722 -9.1047 6.3203 20 6 7.7735 -11.2935 4.5032 21 6 7.4398 -11.9870 3.3547 22 6 8.0493 -13.3392 3.0888 23 8 9.4712 -13.2152 3.0173 24 14 7.4027 -14.0052 1.4735 25 6 6.5525 -11.4392 2.4465 26 6 5.9888 -10.2017 2.6896 27 6 1.4332 -2.5312 2.7123 28 1 -0.3633 0.5139 0.8899 29 1 -0.3633 0.5138 -0.8901 30 1 -0.3634 -1.0276 -0.0005 31 1 3.1300 1.4425 0.0005 32 1 1.6768 1.9563 -0.8900 33 1 1.6767 1.9563 0.8899 34 1 1.6767 -1.7489 -1.2493 35 1 1.6767 -0.2074 -2.1393 36 1 3.1300 -0.7216 -1.2490 37 1 3.7071 -2.6457 1.4008 38 1 2.7463 -3.5606 0.1594 39 1 2.5519 -4.5767 4.2094 40 1 3.9027 -3.8002 3.3489 41 1 5.3691 -7.6895 2.1430 42 1 4.0177 -8.4654 3.0033 43 1 8.4696 -11.7218 5.2091 44 1 7.7844 -14.0223 3.8958 45 1 9.9308 -14.0490 2.8482 46 1 5.9284 -14.1688 1.5454 47 1 7.7578 -13.0828 0.3652 48 1 6.2968 -11.9813 1.5481 49 1 5.2931 -9.7763 1.9816 50 1 0.3964 -2.6267 3.0349 51 1 2.0515 -1.9877 3.4267 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_1458_6201216_14598394.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 18:17:44 Heat of formation + Delta-G solvation = -131.815018 kcal Electronic energy + Delta-G solvation = -32231.053964 eV Core-core repulsion = 27531.631699 eV Total energy + Delta-G solvation = -4699.422265 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 429.096 amu Computer time = 1.10 seconds Orbital eigenvalues (eV) -42.07094 -41.40835 -40.80233 -39.38727 -38.56225 -37.48024 -37.22741 -33.94487 -33.80986 -32.21892 -31.11662 -30.41659 -29.20943 -28.36362 -28.26878 -26.67252 -26.40028 -24.49422 -23.67790 -22.56781 -22.06638 -20.89281 -20.63816 -19.89536 -18.66702 -18.42639 -18.23671 -18.18921 -17.69694 -17.07022 -16.91816 -16.78707 -16.51714 -15.97975 -15.95544 -15.77930 -15.54639 -14.96293 -14.75596 -14.72496 -14.57493 -14.27695 -14.06172 -13.98201 -13.88655 -13.64295 -13.50409 -13.34262 -13.20346 -13.01462 -12.81472 -12.68216 -12.66144 -12.47027 -12.42532 -12.29065 -12.21807 -12.04058 -11.94986 -11.92104 -11.85500 -11.56514 -11.37598 -11.31578 -11.20935 -10.38410 -10.33157 -10.10504 -9.46829 -4.89843 -0.25163 -0.03906 0.48847 0.81141 0.89064 1.32709 1.68250 1.97155 2.17171 2.21475 2.70115 3.19886 3.31186 3.41430 3.49972 3.50687 3.55448 3.72932 3.77424 3.80978 3.84891 3.89808 3.90266 3.93440 3.96007 4.05444 4.09536 4.14777 4.19078 4.31565 4.42423 4.46036 4.51972 4.61336 4.65799 4.68186 4.73838 4.74424 4.76974 4.78397 4.82295 4.89540 4.92577 4.97905 5.07021 5.08993 5.10536 5.18121 5.29620 5.30017 5.31978 5.37281 5.83527 6.40383 6.47326 6.91854 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.176 4.176 2 C 0.097 3.903 3 C -0.140 4.140 4 C -0.173 4.173 5 O -0.383 6.383 6 C 0.060 3.940 7 H 0.106 0.894 8 C -0.149 4.149 9 C -0.100 4.100 10 H 0.122 0.878 11 C 0.079 3.921 12 O -0.344 6.344 13 C 0.465 3.535 14 O -0.523 6.523 15 C 0.060 3.940 16 O -0.304 6.304 17 C 0.150 3.850 18 C -0.138 4.138 19 Br -0.042 7.042 20 C -0.029 4.029 21 C -0.117 4.117 22 C -0.080 4.080 23 O -0.566 6.566 24 Si 0.774 3.226 25 C -0.076 4.076 26 C -0.188 4.188 27 C -0.127 4.127 28 H 0.058 0.942 29 H 0.077 0.923 30 H 0.065 0.935 31 H 0.055 0.945 32 H 0.084 0.916 33 H 0.057 0.943 34 H 0.063 0.937 35 H 0.075 0.925 36 H 0.055 0.945 37 H 0.077 0.923 38 H 0.082 0.918 39 H 0.075 0.925 40 H 0.066 0.934 41 H 0.141 0.859 42 H 0.144 0.856 43 H 0.149 0.851 44 H 0.096 0.904 45 H 0.404 0.596 46 H -0.280 1.280 47 H -0.291 1.291 48 H 0.139 0.861 49 H 0.177 0.823 50 H 0.091 0.909 51 H 0.083 0.917 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.840 -5.810 -7.379 10.147 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.234 4.234 2 C 0.059 3.941 3 C -0.198 4.198 4 C -0.231 4.231 5 O -0.303 6.303 6 C 0.002 3.998 7 H 0.124 0.876 8 C -0.186 4.186 9 C -0.118 4.118 10 H 0.140 0.860 11 C 0.005 3.995 12 O -0.261 6.261 13 C 0.308 3.692 14 O -0.412 6.412 15 C -0.015 4.015 16 O -0.217 6.217 17 C 0.102 3.898 18 C -0.218 4.218 19 Br 0.043 6.957 20 C -0.049 4.049 21 C -0.118 4.118 22 C -0.189 4.189 23 O -0.376 6.376 24 Si 0.679 3.321 25 C -0.094 4.094 26 C -0.207 4.207 27 C -0.165 4.165 28 H 0.077 0.923 29 H 0.096 0.904 30 H 0.084 0.916 31 H 0.074 0.926 32 H 0.103 0.897 33 H 0.076 0.924 34 H 0.082 0.918 35 H 0.094 0.906 36 H 0.074 0.926 37 H 0.095 0.905 38 H 0.100 0.900 39 H 0.093 0.907 40 H 0.084 0.916 41 H 0.158 0.842 42 H 0.162 0.838 43 H 0.167 0.833 44 H 0.113 0.887 45 H 0.256 0.744 46 H -0.206 1.206 47 H -0.219 1.219 48 H 0.157 0.843 49 H 0.194 0.806 50 H 0.110 0.890 51 H 0.102 0.898 Dipole moment (debyes) X Y Z Total from point charges -4.093 -4.269 -6.734 8.962 hybrid contribution -0.104 0.470 0.312 0.574 sum -4.197 -3.799 -6.422 8.561 Atomic orbital electron populations 1.22447 0.94809 1.02900 1.03211 1.21688 0.93800 0.93241 0.85404 1.21799 1.01544 0.93430 1.02978 1.22439 1.01728 1.01091 0.97793 1.88024 1.74264 1.24272 1.43729 1.23677 0.97373 0.81221 0.97488 0.87602 1.23610 0.98896 0.96685 0.99454 1.22341 0.97609 0.95963 0.95891 0.86013 1.23243 0.97906 0.79893 0.98413 1.86424 1.56309 1.33317 1.50004 1.23330 0.76562 0.87505 0.81827 1.90759 1.55998 1.69004 1.25401 1.22313 0.95767 0.90590 0.92790 1.86165 1.57861 1.31022 1.46696 1.18627 0.92777 0.84632 0.93748 1.21317 1.05418 0.98563 0.96462 1.96768 1.92475 1.75271 1.31139 1.20949 0.96155 0.90687 0.97106 1.19685 0.99481 0.97583 0.95036 1.24867 0.85817 0.95374 1.12872 1.86446 1.16525 1.38907 1.95726 0.94027 0.78369 0.86313 0.73420 1.21055 0.95453 0.94995 0.97923 1.21470 1.05225 0.96443 0.97580 1.23239 1.02408 0.93930 0.96898 0.92285 0.90417 0.91580 0.92560 0.89690 0.92399 0.91781 0.90575 0.92576 0.90487 0.89982 0.90707 0.91570 0.84193 0.83842 0.83305 0.88662 0.74413 1.20641 1.21851 0.84341 0.80591 0.89042 0.89833 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 0.40 8.38 71.98 0.60 1.01 16 2 C 0.10 0.02 1.11 -10.79 -0.01 0.00 16 3 C -0.14 0.01 8.84 71.98 0.64 0.64 16 4 C -0.17 0.31 8.38 71.98 0.60 0.92 16 5 O -0.38 -1.44 10.00 -148.98 -1.49 -2.93 16 6 C 0.06 -0.05 2.82 31.12 0.09 0.03 16 7 H 0.11 -0.40 5.55 -2.38 -0.01 -0.41 16 8 C -0.15 0.18 7.46 31.12 0.23 0.41 16 9 C -0.10 0.26 4.02 -10.27 -0.04 0.22 16 10 H 0.12 -0.65 8.14 -2.39 -0.02 -0.67 16 11 C 0.08 0.11 5.30 71.98 0.38 0.49 16 12 O -0.34 -0.59 10.22 -51.43 -0.53 -1.12 16 13 C 0.46 2.23 8.03 71.24 0.57 2.80 16 14 O -0.52 -7.30 16.25 28.38 0.46 -6.84 16 15 C 0.06 -0.11 5.33 71.24 0.38 0.27 16 16 O -0.30 -1.94 9.01 -73.58 -0.66 -2.61 16 17 C 0.15 0.77 6.68 22.52 0.15 0.92 16 18 C -0.14 -1.04 6.24 22.40 0.14 -0.90 16 19 Br -0.04 -0.41 33.16 -20.37 -0.68 -1.09 16 20 C -0.03 -0.15 9.35 22.27 0.21 0.06 16 21 C -0.12 -0.32 5.42 -19.85 -0.11 -0.43 16 22 C -0.08 0.22 2.81 71.23 0.20 0.42 16 23 O -0.57 1.00 12.74 -148.98 -1.90 -0.90 16 24 Si 0.77 -4.08 29.78 68.60 2.04 -2.03 16 25 C -0.08 -0.09 8.66 22.26 0.19 0.10 16 26 C -0.19 0.05 9.04 22.36 0.20 0.25 16 27 C -0.13 0.22 7.47 31.12 0.23 0.45 16 28 H 0.06 -0.04 8.14 -2.39 -0.02 -0.06 16 29 H 0.08 -0.32 8.14 -2.38 -0.02 -0.34 16 30 H 0.07 -0.24 6.25 -2.39 -0.01 -0.26 16 31 H 0.06 0.08 8.14 -2.39 -0.02 0.06 16 32 H 0.08 -0.27 8.14 -2.38 -0.02 -0.29 16 33 H 0.06 0.06 8.14 -2.39 -0.02 0.04 16 34 H 0.06 -0.19 7.02 -2.39 -0.02 -0.20 16 35 H 0.08 -0.29 8.14 -2.39 -0.02 -0.30 16 36 H 0.06 0.00 8.14 -2.39 -0.02 -0.02 16 37 H 0.08 0.15 7.90 -2.39 -0.02 0.13 16 38 H 0.08 -0.24 8.14 -2.39 -0.02 -0.26 16 39 H 0.07 0.14 8.13 -2.39 -0.02 0.12 16 40 H 0.07 0.25 7.84 -2.39 -0.02 0.23 16 41 H 0.14 -1.11 7.66 -2.38 -0.02 -1.13 16 42 H 0.14 -1.24 7.66 -2.39 -0.02 -1.26 16 43 H 0.15 0.52 8.06 -2.91 -0.02 0.50 16 44 H 0.10 -0.62 7.96 -2.39 -0.02 -0.64 16 45 H 0.40 -4.93 8.74 -74.06 -0.65 -5.58 16 46 H -0.28 0.28 7.11 99.48 0.71 0.98 16 47 H -0.29 -0.48 7.11 99.48 0.71 0.23 16 48 H 0.14 -0.20 4.87 -2.91 -0.01 -0.22 16 49 H 0.18 -1.42 6.30 -2.91 -0.02 -1.44 16 50 H 0.09 -0.37 8.14 -2.39 -0.02 -0.39 16 51 H 0.08 0.07 8.10 -2.39 -0.02 0.05 16 Total: 0.00 -23.21 434.18 2.25 -20.96 By element: Atomic # 1 Polarization: -11.45 SS G_CDS: 0.34 Total: -11.11 kcal Atomic # 6 Polarization: 3.00 SS G_CDS: 4.66 Total: 7.66 kcal Atomic # 8 Polarization: -10.27 SS G_CDS: -4.11 Total: -14.39 kcal Atomic # 14 Polarization: -4.08 SS G_CDS: 2.04 Total: -2.03 kcal Atomic # 35 Polarization: -0.41 SS G_CDS: -0.68 Total: -1.09 kcal Total: -23.21 2.25 -20.96 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_1458_6201216_14598394.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -110.857 kcal (2) G-P(sol) polarization free energy of solvation -23.213 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -134.069 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.254 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.959 kcal (6) G-S(sol) free energy of system = (1) + (5) -131.815 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.10 seconds