Wall clock time and date at job start Tue Mar 9 2021 18:17:58 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42899 * 1 3 3 Si 1.86305 * 109.46924 * 2 1 4 4 C 1.50700 * 109.47137 * 119.99978 * 2 1 3 5 5 C 1.38232 * 119.94706 * 65.00205 * 4 2 1 6 6 C 1.38180 * 120.07681 * 179.97438 * 5 4 2 7 7 C 1.38678 * 119.95411 * 0.02562 * 6 5 4 8 8 O 1.35915 * 120.05567 * 179.97438 * 7 6 5 9 9 C 1.42894 * 117.00619 * 359.97438 * 8 7 6 10 10 C 1.50703 * 109.47564 * 179.97438 * 9 8 7 11 11 O 1.20827 * 119.99605 * 0.02562 * 10 9 8 12 12 O 1.34226 * 120.00213 * 179.97438 * 10 9 8 13 13 C 1.45199 * 117.00116 * 180.02562 * 12 10 9 14 14 C 1.52998 * 109.47011 * 180.02562 * 13 12 10 15 15 H 1.08997 * 109.47655 * 54.99363 * 14 13 12 16 16 C 1.52998 * 109.47106 * 174.99979 * 14 13 12 17 17 C 1.52998 * 109.47429 * 179.97438 * 16 14 13 18 18 C 1.52999 * 109.46788 * 299.99799 * 17 16 14 19 19 H 1.09008 * 109.47201 * 299.99563 * 18 17 16 20 20 O 1.42903 * 109.47256 * 180.02562 * 18 17 16 21 21 C 1.53001 * 109.47329 * 59.99953 * 18 17 16 22 22 C 1.52998 * 109.46901 * 299.99578 * 21 18 17 23 23 C 1.38834 * 119.88159 * 0.24877 * 7 6 5 24 24 Br 1.89095 * 120.03368 * 179.73031 * 23 7 6 25 25 C 1.38192 * 119.92597 * 359.49578 * 23 7 6 26 26 H 0.96692 * 114.00025 * 299.99842 * 1 2 3 27 27 H 1.08996 * 109.47780 * 240.00017 * 2 1 3 28 28 H 1.48496 * 109.99938 * 299.99819 * 3 2 1 29 29 H 1.48499 * 110.00147 * 61.31694 * 3 2 1 30 30 H 1.08007 * 119.95954 * 359.97438 * 5 4 2 31 31 H 1.08006 * 120.02383 * 179.97438 * 6 5 4 32 32 H 1.09002 * 109.47186 * 59.99746 * 9 8 7 33 33 H 1.09003 * 109.46771 * 300.00289 * 9 8 7 34 34 H 1.08993 * 109.47569 * 59.99726 * 13 12 10 35 35 H 1.09006 * 109.46757 * 299.99918 * 13 12 10 36 36 H 1.08997 * 109.47366 * 59.99207 * 16 14 13 37 37 H 1.09009 * 109.46785 * 299.99476 * 16 14 13 38 38 H 1.08997 * 109.47384 * 179.97438 * 17 16 14 39 39 H 1.08997 * 109.47329 * 59.99386 * 17 16 14 40 40 H 0.96700 * 114.00311 * 180.02562 * 20 18 17 41 41 H 1.08997 * 109.47215 * 60.00152 * 21 18 17 42 42 H 1.08999 * 109.47164 * 180.02562 * 21 18 17 43 43 H 1.08997 * 109.47655 * 300.00305 * 22 21 18 44 44 H 1.09005 * 109.46908 * 179.97438 * 22 21 18 45 45 H 1.07998 * 119.97786 * 180.22609 * 25 23 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9313 -0.7104 1.2305 5 6 1.6841 -2.0602 1.3972 6 6 2.1440 -2.7143 2.5242 7 6 2.8538 -2.0157 3.4891 8 8 3.3065 -2.6569 4.5987 9 6 3.0148 -4.0516 4.7065 10 6 3.5918 -4.5878 5.9913 11 8 4.1911 -3.8510 6.7382 12 8 3.4392 -5.8836 6.3063 13 6 4.0207 -6.3303 7.5595 14 6 3.7471 -7.8241 7.7450 15 1 4.1135 -8.3712 6.8764 16 6 4.4646 -8.3219 9.0012 17 6 4.1905 -9.8156 9.1871 18 6 2.6848 -10.0431 9.3358 19 1 2.3186 -9.4957 10.2044 20 8 2.4287 -11.4382 9.5099 21 6 1.9672 -9.5453 8.0795 22 6 2.2414 -8.0516 7.8938 23 6 3.0961 -0.6588 3.3225 24 35 4.0569 0.2997 4.6393 25 6 2.6385 -0.0106 2.1911 26 1 -0.3933 0.4416 0.7650 27 1 1.7924 -0.5138 -0.8899 28 1 1.5614 2.4679 -1.2085 29 1 1.5878 2.4586 1.2242 30 1 1.1309 -2.6041 0.6458 31 1 1.9500 -3.7689 2.6538 32 1 3.4553 -4.5814 3.8618 33 1 1.9346 -4.1981 4.7039 34 1 3.5766 -5.7740 8.3849 35 1 5.0969 -6.1577 7.5426 36 1 4.0982 -7.7748 9.8698 37 1 5.5373 -8.1595 8.8954 38 1 4.7020 -10.1704 10.0818 39 1 4.5566 -10.3631 8.3185 40 1 1.4921 -11.6567 9.6105 41 1 2.3333 -10.0928 7.2110 42 1 0.8945 -9.7070 8.1856 43 1 1.8753 -7.5042 8.7623 44 1 1.7305 -7.6971 6.9985 45 1 2.8297 1.0440 2.0589 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_1458_6201216_16737258.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 18:17:58 Heat of formation + Delta-G solvation = -177.447982 kcal Electronic energy + Delta-G solvation = -28582.640095 eV Core-core repulsion = 24192.314274 eV Total energy + Delta-G solvation = -4390.325821 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 401.065 amu Computer time = 0.75 seconds Orbital eigenvalues (eV) -41.99093 -41.32060 -40.17363 -39.42296 -37.84010 -37.37411 -36.61468 -33.58566 -32.41117 -32.09532 -31.96089 -30.68345 -29.87744 -26.86382 -26.33610 -24.29703 -23.92937 -22.79209 -22.39291 -21.97429 -20.99387 -19.80832 -18.78716 -18.29333 -18.23471 -18.16816 -17.99899 -16.98547 -16.93243 -16.55623 -16.43661 -16.26986 -15.73807 -15.60445 -15.39802 -15.09731 -14.84615 -14.62935 -14.46449 -14.29387 -14.10678 -13.82350 -13.64050 -13.45702 -13.35288 -13.18707 -12.66362 -12.56070 -12.43583 -12.33761 -12.25904 -11.99272 -11.87185 -11.81392 -11.74208 -11.66248 -11.48747 -11.22218 -11.11947 -10.80464 -10.70575 -10.08739 -9.41567 -5.03030 -0.12861 -0.03934 0.62788 0.83096 0.99791 1.18732 1.52112 1.89589 2.18943 2.27211 3.05657 3.24454 3.26487 3.38804 3.48124 3.52608 3.60307 3.60540 3.66246 3.69179 3.78581 3.93955 3.94401 4.03376 4.15278 4.20219 4.22216 4.25345 4.33433 4.34052 4.35836 4.46285 4.51371 4.66009 4.66897 4.81425 4.88659 4.92506 4.93927 5.02888 5.03145 5.17294 5.17517 5.21910 5.29798 5.32540 5.85646 6.29926 6.56899 6.64421 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.528 6.528 2 C -0.067 4.067 3 Si 0.677 3.323 4 C -0.147 4.147 5 C -0.034 4.034 6 C -0.203 4.203 7 C 0.161 3.839 8 O -0.280 6.280 9 C 0.066 3.934 10 C 0.463 3.537 11 O -0.476 6.476 12 O -0.351 6.351 13 C 0.073 3.927 14 C -0.089 4.089 15 H 0.087 0.913 16 C -0.111 4.111 17 C -0.111 4.111 18 C 0.102 3.898 19 H 0.055 0.945 20 O -0.569 6.569 21 C -0.152 4.152 22 C -0.113 4.113 23 C -0.118 4.118 24 Br -0.023 7.023 25 C -0.051 4.051 26 H 0.377 0.623 27 H 0.122 0.878 28 H -0.252 1.252 29 H -0.256 1.256 30 H 0.139 0.861 31 H 0.142 0.858 32 H 0.111 0.889 33 H 0.110 0.890 34 H 0.075 0.925 35 H 0.076 0.924 36 H 0.070 0.930 37 H 0.076 0.924 38 H 0.074 0.926 39 H 0.072 0.928 40 H 0.379 0.621 41 H 0.073 0.927 42 H 0.067 0.933 43 H 0.065 0.935 44 H 0.074 0.926 45 H 0.144 0.856 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.238 -2.677 -1.776 3.443 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.335 6.335 2 C -0.177 4.177 3 Si 0.578 3.422 4 C -0.149 4.149 5 C -0.052 4.052 6 C -0.222 4.222 7 C 0.114 3.886 8 O -0.192 6.192 9 C -0.010 4.010 10 C 0.304 3.696 11 O -0.361 6.361 12 O -0.269 6.269 13 C 0.000 4.000 14 C -0.107 4.107 15 H 0.106 0.894 16 C -0.148 4.148 17 C -0.149 4.149 18 C 0.043 3.957 19 H 0.073 0.927 20 O -0.375 6.375 21 C -0.190 4.190 22 C -0.150 4.150 23 C -0.198 4.198 24 Br 0.062 6.938 25 C -0.070 4.070 26 H 0.225 0.775 27 H 0.140 0.860 28 H -0.177 1.177 29 H -0.181 1.181 30 H 0.157 0.843 31 H 0.159 0.841 32 H 0.129 0.871 33 H 0.128 0.872 34 H 0.094 0.906 35 H 0.095 0.905 36 H 0.089 0.911 37 H 0.094 0.906 38 H 0.093 0.907 39 H 0.091 0.909 40 H 0.226 0.774 41 H 0.091 0.909 42 H 0.085 0.915 43 H 0.084 0.916 44 H 0.093 0.907 45 H 0.161 0.839 Dipole moment (debyes) X Y Z Total from point charges -0.030 -1.531 -1.435 2.099 hybrid contribution -1.929 -0.489 0.333 2.018 sum -1.959 -2.020 -1.102 3.022 Atomic orbital electron populations 1.86610 1.17527 1.79938 1.49414 1.24912 0.84030 1.10840 0.97953 0.95010 0.91758 0.74697 0.80768 1.20211 1.02040 0.95022 0.97607 1.20966 0.94867 0.93385 0.96022 1.21322 1.03945 1.01093 0.95863 1.18557 0.93342 0.90619 0.86115 1.86197 1.73188 1.21214 1.38629 1.21949 1.02412 0.81557 0.95120 1.22732 0.78377 0.81050 0.87478 1.90774 1.37067 1.58091 1.50135 1.86400 1.72330 1.26256 1.41885 1.23255 0.98769 0.95219 0.82752 1.21289 0.96955 0.92771 0.99726 0.89447 1.21480 1.00859 0.95568 0.96931 1.21437 0.94406 0.95616 1.03407 1.21852 0.95921 0.81819 0.96070 0.92691 1.86522 1.30866 1.24287 1.95801 1.22276 1.00718 0.96544 0.99438 1.21544 0.94955 0.95822 1.02700 1.20986 1.08257 0.92260 0.98274 1.96821 1.72596 1.72764 1.51601 1.20915 0.95165 0.99918 0.91033 0.77518 0.86029 1.17713 1.18084 0.84349 0.84056 0.87085 0.87187 0.90632 0.90538 0.91116 0.90570 0.90713 0.90878 0.77363 0.90862 0.91459 0.91640 0.90728 0.83904 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 0.01 12.83 -35.23 -0.45 -0.45 16 2 C -0.07 0.10 2.80 36.01 0.10 0.20 16 3 Si 0.68 -0.96 29.88 -169.99 -5.08 -6.04 16 4 C -0.15 0.15 5.35 -104.60 -0.56 -0.41 16 5 C -0.03 0.05 9.68 -39.60 -0.38 -0.33 16 6 C -0.20 0.32 9.04 -39.44 -0.36 -0.04 16 7 C 0.16 0.12 6.68 -39.20 -0.26 -0.14 16 8 O -0.28 -0.45 9.01 -39.43 -0.36 -0.81 16 9 C 0.07 -0.11 5.33 36.01 0.19 0.08 16 10 C 0.46 0.48 8.03 36.01 0.29 0.77 16 11 O -0.48 -2.35 16.25 -25.48 -0.41 -2.76 16 12 O -0.35 0.08 9.76 -39.25 -0.38 -0.30 16 13 C 0.07 -0.06 4.84 37.16 0.18 0.12 16 14 C -0.09 0.18 2.44 -90.62 -0.22 -0.04 16 15 H 0.09 -0.16 8.14 -51.93 -0.42 -0.58 16 16 C -0.11 0.24 5.20 -26.73 -0.14 0.10 16 17 C -0.11 0.10 5.57 -26.73 -0.15 -0.05 16 18 C 0.10 -0.09 3.47 -26.73 -0.09 -0.18 16 19 H 0.06 -0.07 8.14 -51.92 -0.42 -0.50 16 20 O -0.57 -0.30 13.32 -35.23 -0.47 -0.77 16 21 C -0.15 0.28 5.55 -26.73 -0.15 0.13 16 22 C -0.11 0.23 5.10 -26.73 -0.14 0.09 16 23 C -0.12 -0.17 6.24 -39.38 -0.25 -0.41 16 24 Br -0.02 -0.06 33.16 -68.01 -2.26 -2.32 16 25 C -0.05 0.01 8.40 -39.58 -0.33 -0.32 16 26 H 0.38 -0.99 8.70 45.56 0.40 -0.59 16 27 H 0.12 -0.29 7.96 -51.93 -0.41 -0.71 16 28 H -0.25 -0.45 7.11 56.52 0.40 -0.05 16 29 H -0.26 -0.14 7.00 56.52 0.40 0.25 16 30 H 0.14 -0.38 8.06 -52.48 -0.42 -0.80 16 31 H 0.14 -0.61 6.30 -52.48 -0.33 -0.94 16 32 H 0.11 -0.48 7.66 -51.93 -0.40 -0.88 16 33 H 0.11 -0.47 7.66 -51.93 -0.40 -0.87 16 34 H 0.08 -0.05 8.13 -51.93 -0.42 -0.47 16 35 H 0.08 -0.05 8.13 -51.93 -0.42 -0.48 16 36 H 0.07 -0.17 8.14 -51.93 -0.42 -0.59 16 37 H 0.08 -0.20 8.14 -51.92 -0.42 -0.62 16 38 H 0.07 -0.04 8.14 -51.93 -0.42 -0.46 16 39 H 0.07 -0.03 8.14 -51.93 -0.42 -0.45 16 40 H 0.38 -1.25 9.08 45.56 0.41 -0.83 16 41 H 0.07 -0.08 8.14 -51.93 -0.42 -0.50 16 42 H 0.07 -0.17 8.14 -51.93 -0.42 -0.59 16 43 H 0.06 -0.14 8.14 -51.93 -0.42 -0.56 16 44 H 0.07 -0.14 7.82 -51.93 -0.41 -0.54 16 45 H 0.14 -0.18 4.83 -52.49 -0.25 -0.43 16 LS Contribution 389.66 15.07 5.87 5.87 Total: 0.00 -8.73 389.66 -11.46 -20.19 By element: Atomic # 1 Polarization: -6.51 SS G_CDS: -5.67 Total: -12.17 kcal Atomic # 6 Polarization: 1.82 SS G_CDS: -2.26 Total: -0.45 kcal Atomic # 8 Polarization: -3.01 SS G_CDS: -2.07 Total: -5.09 kcal Atomic # 14 Polarization: -0.96 SS G_CDS: -5.08 Total: -6.04 kcal Atomic # 35 Polarization: -0.06 SS G_CDS: -2.26 Total: -2.32 kcal Total LS contribution 5.87 Total: 5.87 kcal Total: -8.73 -11.46 -20.19 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_1458_6201216_16737258.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -157.254 kcal (2) G-P(sol) polarization free energy of solvation -8.729 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -165.984 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.464 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.194 kcal (6) G-S(sol) free energy of system = (1) + (5) -177.448 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.75 seconds