Wall clock time and date at job start Tue Mar 9 2021 18:23:13 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42903 * 1 3 3 C 1.42898 * 113.99987 * 2 1 4 4 C 1.53004 * 112.84712 * 294.01057 * 3 2 1 5 5 F 1.39903 * 109.47123 * 195.88954 * 4 3 2 6 6 F 1.39901 * 109.46948 * 315.88807 * 4 3 2 7 7 F 1.39894 * 109.47008 * 75.89040 * 4 3 2 8 8 C 1.53788 * 113.69389 * 162.74373 * 3 2 1 9 9 C 1.53783 * 87.07916 * 270.86959 * 8 3 2 10 10 H 1.08994 * 113.68937 * 220.00346 * 9 8 3 11 11 C 1.53001 * 113.61398 * 89.11323 * 9 8 3 12 12 O 1.45204 * 109.46970 * 87.50076 * 11 9 8 13 13 C 1.34227 * 116.99653 * 179.97438 * 12 11 9 14 14 O 1.20830 * 120.00277 * 0.02562 * 13 12 11 15 15 C 1.50698 * 119.99706 * 180.02562 * 13 12 11 16 16 O 1.42904 * 109.47240 * 180.02562 * 15 13 12 17 17 C 1.35915 * 117.00271 * 179.97438 * 16 15 13 18 18 C 1.38790 * 120.06333 * 180.02562 * 17 16 15 19 19 Br 1.89105 * 120.03291 * 0.02562 * 18 17 16 20 20 C 1.38234 * 119.93280 * 179.97438 * 18 17 16 21 21 C 1.38245 * 120.04421 * 359.97438 * 20 18 17 22 22 C 1.50691 * 119.94293 * 179.97438 * 21 20 18 23 23 O 1.42899 * 109.47139 * 300.00109 * 22 21 20 24 24 Si 1.86297 * 109.47501 * 180.02562 * 22 21 20 25 25 C 1.38287 * 120.11472 * 0.26036 * 21 20 18 26 26 C 1.38141 * 120.07213 * 359.48389 * 25 21 20 27 27 C 1.53778 * 113.61883 * 65.20541 * 3 2 1 28 28 H 1.08998 * 109.47571 * 304.84704 * 1 2 3 29 29 H 1.09002 * 109.46708 * 64.84642 * 1 2 3 30 30 H 1.08999 * 109.46867 * 184.84585 * 1 2 3 31 31 H 1.08995 * 113.61432 * 156.31714 * 8 3 2 32 32 H 1.09000 * 113.61030 * 25.41678 * 8 3 2 33 33 H 1.08999 * 109.47394 * 327.50291 * 11 9 8 34 34 H 1.08995 * 109.47187 * 207.50167 * 11 9 8 35 35 H 1.09000 * 109.47581 * 59.99900 * 15 13 12 36 36 H 1.08999 * 109.46947 * 300.00052 * 15 13 12 37 37 H 1.07998 * 119.97986 * 179.97438 * 20 18 17 38 38 H 1.09000 * 109.47438 * 60.00050 * 22 21 20 39 39 H 0.96710 * 114.00325 * 179.97438 * 23 22 21 40 40 H 1.48502 * 110.00010 * 59.99849 * 24 22 21 41 41 H 1.48500 * 110.00439 * 181.32029 * 24 22 21 42 42 H 1.08000 * 119.95824 * 179.72405 * 25 21 20 43 43 H 1.08000 * 120.01943 * 180.25945 * 26 25 21 44 44 H 1.09004 * 113.61564 * 334.65213 * 27 3 2 45 45 H 1.09001 * 113.69524 * 203.75955 * 27 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0102 1.3054 0.0000 4 6 1.7277 2.0815 -1.2880 5 9 2.6016 3.1704 -1.3776 6 9 1.9162 1.2405 -2.3900 7 9 0.4073 2.5433 -1.2741 8 6 3.4902 1.3230 0.4178 9 6 2.9981 1.4843 1.8658 10 1 3.5936 2.1810 2.4556 11 6 2.7566 0.1544 2.5827 12 8 3.9919 -0.2939 3.2002 13 6 3.9502 -1.4539 3.8744 14 8 2.9158 -2.0743 3.9457 15 6 5.1935 -1.9823 4.5423 16 8 4.8966 -3.2213 5.1895 17 6 5.9171 -3.8357 5.8439 18 6 5.6996 -5.0424 6.4941 19 35 3.9826 -5.8344 6.4701 20 6 6.7397 -5.6653 7.1584 21 6 7.9954 -5.0873 7.1747 22 6 9.1273 -5.7679 7.9000 23 8 8.7923 -5.9067 9.2822 24 14 10.6748 -4.7436 7.7366 25 6 8.2130 -3.8825 6.5316 26 6 7.1784 -3.2586 5.8618 27 6 1.7211 2.1086 1.2791 28 1 -0.3634 0.5872 0.8433 29 1 -0.3633 0.4368 -0.9302 30 1 -0.3633 -1.0240 0.0868 31 1 4.0391 2.1874 0.0442 32 1 4.0068 0.3808 0.2345 33 1 2.4193 -0.5908 1.8622 34 1 1.9945 0.2886 3.3503 35 1 5.5439 -1.2611 5.2806 36 1 5.9689 -2.1409 3.7929 37 1 6.5712 -6.6041 7.6649 38 1 9.2962 -6.7536 7.4664 39 1 9.4771 -6.3382 9.8116 40 1 10.4573 -3.3974 8.3245 41 1 11.8062 -5.4198 8.4206 42 1 9.1940 -3.4310 6.5497 43 1 7.3504 -2.3198 5.3563 44 1 0.8094 1.8008 1.7913 45 1 1.7858 3.1881 1.1425 There are 72 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 72 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_1458_6201216_17321610.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 18:23:13 Heat of formation + Delta-G solvation = -264.438307 kcal Electronic energy + Delta-G solvation = -36635.942145 eV Core-core repulsion = 30833.482214 eV Total energy + Delta-G solvation = -5802.459931 eV No. of doubly occupied orbitals = 72 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 455.037 amu Computer time = 1.07 seconds Orbital eigenvalues (eV) -51.25328 -48.78447 -48.72830 -42.02835 -41.50173 -40.92749 -39.26417 -37.83759 -37.38290 -36.89950 -33.67268 -32.11224 -31.26080 -30.47176 -29.76338 -28.22617 -27.30702 -26.77187 -26.29494 -24.19104 -23.36527 -22.48182 -21.95230 -20.65955 -19.84783 -19.68614 -19.54145 -19.24276 -18.62840 -18.44674 -18.08552 -17.98654 -17.24718 -16.96120 -16.76904 -16.69403 -16.50535 -15.87266 -15.76496 -15.66393 -15.59971 -15.56934 -15.28395 -15.15936 -14.98384 -14.88007 -14.80140 -14.64148 -14.36654 -14.22879 -14.10843 -13.89128 -13.73357 -13.50846 -13.29980 -13.15791 -12.79039 -12.62438 -12.38447 -12.33117 -12.16053 -12.04506 -11.87400 -11.83345 -11.71766 -11.68823 -11.50367 -11.22306 -10.82054 -10.49820 -9.96285 -9.33673 -4.89149 -0.06342 0.11319 0.61481 0.91556 1.01125 1.33565 1.53299 1.65224 1.99824 2.07480 2.28499 2.36635 2.56955 2.62686 2.88451 3.19714 3.29613 3.33734 3.41961 3.55504 3.63472 3.69159 3.83359 3.87860 4.00001 4.02201 4.10510 4.19243 4.22565 4.25788 4.29969 4.36492 4.45715 4.50721 4.52065 4.61673 4.64448 4.69342 4.77044 4.83551 4.83786 4.98575 5.00098 5.25606 5.29316 5.45906 5.69434 6.00121 6.58557 6.59889 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.006 3.994 2 O -0.348 6.348 3 C 0.029 3.971 4 C 0.433 3.567 5 F -0.174 7.174 6 F -0.189 7.189 7 F -0.186 7.186 8 C -0.110 4.110 9 C -0.090 4.090 10 H 0.129 0.871 11 C 0.076 3.924 12 O -0.342 6.342 13 C 0.465 3.535 14 O -0.524 6.524 15 C 0.061 3.939 16 O -0.308 6.308 17 C 0.150 3.850 18 C -0.142 4.142 19 Br -0.052 7.052 20 C -0.036 4.036 21 C -0.113 4.113 22 C -0.087 4.087 23 O -0.560 6.560 24 Si 0.773 3.227 25 C -0.057 4.057 26 C -0.186 4.186 27 C -0.137 4.137 28 H 0.069 0.931 29 H 0.047 0.953 30 H 0.107 0.893 31 H 0.132 0.868 32 H 0.093 0.907 33 H 0.078 0.922 34 H 0.076 0.924 35 H 0.144 0.856 36 H 0.147 0.853 37 H 0.138 0.862 38 H 0.095 0.905 39 H 0.396 0.604 40 H -0.289 1.289 41 H -0.291 1.291 42 H 0.164 0.836 43 H 0.184 0.816 44 H 0.100 0.900 45 H 0.130 0.870 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 7.172 4.065 -0.318 8.250 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.089 4.089 2 O -0.266 6.266 3 C -0.013 4.013 4 C 0.379 3.621 5 F -0.155 7.155 6 F -0.170 7.170 7 F -0.167 7.167 8 C -0.147 4.147 9 C -0.108 4.108 10 H 0.147 0.853 11 C 0.003 3.997 12 O -0.259 6.259 13 C 0.307 3.693 14 O -0.412 6.412 15 C -0.014 4.014 16 O -0.221 6.221 17 C 0.102 3.898 18 C -0.222 4.222 19 Br 0.033 6.967 20 C -0.056 4.056 21 C -0.114 4.114 22 C -0.195 4.195 23 O -0.371 6.371 24 Si 0.678 3.322 25 C -0.074 4.074 26 C -0.205 4.205 27 C -0.174 4.174 28 H 0.088 0.912 29 H 0.065 0.935 30 H 0.125 0.875 31 H 0.150 0.850 32 H 0.112 0.888 33 H 0.097 0.903 34 H 0.095 0.905 35 H 0.162 0.838 36 H 0.164 0.836 37 H 0.156 0.844 38 H 0.113 0.887 39 H 0.246 0.754 40 H -0.217 1.217 41 H -0.219 1.219 42 H 0.181 0.819 43 H 0.201 0.799 44 H 0.119 0.881 45 H 0.148 0.852 Dipole moment (debyes) X Y Z Total from point charges 6.134 4.110 -0.185 7.386 hybrid contribution -0.716 -0.498 0.648 1.087 sum 5.418 3.612 0.464 6.528 Atomic orbital electron populations 1.23244 0.78878 1.05073 1.01746 1.88077 1.21955 1.22747 1.93846 1.24304 1.01122 0.86177 0.89740 1.21504 0.74123 0.78725 0.87795 1.93174 1.69278 1.56441 1.96627 1.93188 1.94858 1.71330 1.57639 1.93180 1.36973 1.89733 1.96857 1.23368 0.90152 1.06137 0.95063 1.22041 0.98021 0.95451 0.95267 0.85311 1.23121 0.83459 0.96301 0.96810 1.86376 1.39632 1.37062 1.62786 1.23393 0.90357 0.79142 0.76372 1.90762 1.34167 1.58432 1.57870 1.22340 0.93180 0.85968 0.99940 1.86158 1.34675 1.35862 1.65423 1.18677 0.87815 0.91096 0.92200 1.21244 0.93602 0.98013 1.09352 1.96755 1.20289 1.81367 1.98244 1.20872 0.90659 0.99472 0.94549 1.19447 0.94217 0.96662 1.01062 1.25079 1.04743 1.06714 0.82990 1.86551 1.47583 1.83417 1.19506 0.94207 0.72073 0.75742 0.90218 1.21222 0.99931 0.92495 0.93770 1.21570 0.90132 1.03645 1.05166 1.23669 0.99801 1.01763 0.92156 0.91242 0.93461 0.87451 0.85014 0.88837 0.90348 0.90547 0.83845 0.83551 0.84431 0.88715 0.75388 1.21662 1.21869 0.81900 0.79926 0.88113 0.85230 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 -0.01 10.30 113.37 1.17 1.16 16 2 O -0.35 -0.51 8.37 -148.98 -1.25 -1.75 16 3 C 0.03 -0.05 0.84 -10.26 -0.01 -0.06 16 4 C 0.43 0.70 2.52 71.98 0.18 0.88 16 5 F -0.17 -0.13 15.81 44.97 0.71 0.58 16 6 F -0.19 -1.13 17.10 44.97 0.77 -0.37 16 7 F -0.19 -0.48 15.39 44.97 0.69 0.21 16 8 C -0.11 0.58 6.89 31.12 0.21 0.79 16 9 C -0.09 0.61 4.21 -10.27 -0.04 0.56 16 10 H 0.13 -1.33 8.14 -2.39 -0.02 -1.35 16 11 C 0.08 -0.13 5.05 71.98 0.36 0.23 16 12 O -0.34 0.53 10.22 -51.39 -0.53 0.01 16 13 C 0.46 0.92 8.03 71.24 0.57 1.49 16 14 O -0.52 -6.03 16.25 28.38 0.46 -5.57 16 15 C 0.06 -0.31 5.33 71.24 0.38 0.07 16 16 O -0.31 -1.15 9.01 -73.52 -0.66 -1.81 16 17 C 0.15 0.32 6.68 22.52 0.15 0.47 16 18 C -0.14 -0.82 6.24 22.40 0.14 -0.68 16 19 Br -0.05 -0.47 33.16 -20.37 -0.68 -1.14 16 20 C -0.04 -0.13 9.35 22.27 0.21 0.08 16 21 C -0.11 0.03 5.42 -19.85 -0.11 -0.08 16 22 C -0.09 0.27 2.81 71.23 0.20 0.47 16 23 O -0.56 -0.32 12.74 -148.98 -1.90 -2.22 16 24 Si 0.77 -4.42 29.78 68.60 2.04 -2.38 16 25 C -0.06 0.25 8.66 22.26 0.19 0.44 16 26 C -0.19 0.93 9.04 22.36 0.20 1.13 16 27 C -0.14 0.92 6.51 31.12 0.20 1.13 16 28 H 0.07 -0.32 6.55 -2.39 -0.02 -0.34 16 29 H 0.05 -0.01 6.69 -2.39 -0.02 -0.03 16 30 H 0.11 -0.31 8.14 -2.39 -0.02 -0.33 16 31 H 0.13 -1.06 7.02 -2.39 -0.02 -1.07 16 32 H 0.09 -0.36 8.10 -2.39 -0.02 -0.38 16 33 H 0.08 0.15 6.12 -2.39 -0.01 0.14 16 34 H 0.08 -0.11 8.13 -2.39 -0.02 -0.13 16 35 H 0.14 -1.69 7.66 -2.39 -0.02 -1.71 16 36 H 0.15 -1.78 7.66 -2.39 -0.02 -1.79 16 37 H 0.14 0.48 8.06 -2.91 -0.02 0.45 16 38 H 0.10 -0.61 7.96 -2.39 -0.02 -0.63 16 39 H 0.40 -2.86 8.74 -74.05 -0.65 -3.50 16 40 H -0.29 -0.11 7.11 99.48 0.71 0.60 16 41 H -0.29 0.13 7.11 99.48 0.71 0.84 16 42 H 0.16 -1.64 4.87 -2.91 -0.01 -1.65 16 43 H 0.18 -2.47 6.30 -2.91 -0.02 -2.49 16 44 H 0.10 -0.76 6.63 -2.38 -0.02 -0.77 16 45 H 0.13 -1.23 8.05 -2.39 -0.02 -1.25 16 Total: 0.00 -25.93 404.75 4.16 -21.76 By element: Atomic # 1 Polarization: -15.87 SS G_CDS: 0.48 Total: -15.39 kcal Atomic # 6 Polarization: 4.05 SS G_CDS: 4.02 Total: 8.07 kcal Atomic # 8 Polarization: -7.47 SS G_CDS: -3.87 Total: -11.35 kcal Atomic # 9 Polarization: -1.75 SS G_CDS: 2.17 Total: 0.43 kcal Atomic # 14 Polarization: -4.42 SS G_CDS: 2.04 Total: -2.38 kcal Atomic # 35 Polarization: -0.47 SS G_CDS: -0.68 Total: -1.14 kcal Total: -25.93 4.16 -21.76 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_1458_6201216_17321610.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -242.676 kcal (2) G-P(sol) polarization free energy of solvation -25.925 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -268.602 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 4.163 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.762 kcal (6) G-S(sol) free energy of system = (1) + (5) -264.438 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.07 seconds