Wall clock time and date at job start Tue Mar 9 2021 12:52:29 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 Si 1.86295 * 1 3 3 C 1.86300 * 109.47191 * 2 1 4 4 C 1.86299 * 109.47206 * 240.00205 * 2 1 3 5 5 C 1.86301 * 109.47343 * 120.00038 * 2 1 3 6 6 O 1.45199 * 109.47013 * 179.97438 * 5 2 1 7 7 C 1.34796 * 117.00026 * 75.00185 * 6 5 2 8 8 O 1.21567 * 120.00103 * 359.97438 * 7 6 5 9 9 C 1.47033 * 120.00060 * 179.97438 * 7 6 5 10 10 C 1.36097 * 123.47734 * 0.03024 * 9 7 6 11 11 S 1.70443 * 110.80947 * 179.97438 * 10 9 7 12 12 C 1.75499 * 92.45646 * 0.02562 * 11 10 9 13 13 C 1.50694 * 124.70001 * 179.97438 * 12 11 10 14 14 O 1.42908 * 109.47053 * 120.02422 * 13 12 11 15 15 Si 1.86299 * 109.47326 * 0.02562 * 13 12 11 16 16 H 1.48498 * 109.47092 * 60.00119 * 15 13 12 17 17 H 1.48504 * 109.46929 * 180.02562 * 15 13 12 18 18 H 1.48501 * 109.46912 * 299.99850 * 15 13 12 19 19 C 1.32747 * 110.59438 * 359.71149 * 12 11 10 20 20 H 1.09001 * 109.47207 * 300.00047 * 1 2 3 21 21 H 1.08996 * 109.47670 * 59.99752 * 1 2 3 22 22 H 1.09002 * 109.47039 * 180.02562 * 1 2 3 23 23 H 1.08996 * 109.47484 * 180.02562 * 3 2 1 24 24 H 1.09000 * 109.46936 * 300.00163 * 3 2 1 25 25 H 1.09001 * 109.47083 * 59.99877 * 3 2 1 26 26 H 1.09002 * 109.46890 * 299.99808 * 4 2 1 27 27 H 1.09000 * 109.47207 * 59.99662 * 4 2 1 28 28 H 1.08996 * 109.47367 * 179.97438 * 4 2 1 29 29 H 1.09002 * 109.47148 * 59.99951 * 5 2 1 30 30 H 1.09001 * 109.46900 * 300.00103 * 5 2 1 31 31 H 1.08009 * 124.59252 * 0.03152 * 10 9 7 32 32 H 1.09008 * 109.47108 * 240.01736 * 13 12 11 33 33 H 0.96700 * 113.99955 * 299.99564 * 14 13 12 34 34 H 1.08002 * 123.44938 * 180.25178 * 19 12 11 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 14 1.8630 0.0000 0.0000 3 6 2.4840 1.7564 0.0000 4 6 2.4840 -0.8782 -1.5212 5 6 2.4840 -0.8782 1.5211 6 8 3.9360 -0.8787 1.5207 7 6 4.5485 0.2812 1.8313 8 8 3.8868 1.2664 2.0948 9 6 6.0168 0.3549 1.8514 10 6 6.8255 -0.7024 1.5680 11 16 8.4668 -0.2583 1.6867 12 6 8.0663 1.3919 2.1297 13 6 9.0768 2.4716 2.4197 14 8 8.8963 3.5520 1.5018 15 14 10.7963 1.7792 2.2333 16 1 10.9835 1.2860 0.8452 17 1 11.7920 2.8430 2.5197 18 1 10.9839 0.6565 3.1871 19 6 6.7499 1.5587 2.1683 20 1 -0.3634 0.5138 0.8900 21 1 -0.3634 0.5138 -0.8899 22 1 -0.3633 -1.0277 0.0005 23 1 3.5739 1.7565 -0.0005 24 1 2.1206 2.2703 -0.8900 25 1 2.1206 2.2703 0.8900 26 1 2.1207 -1.9058 -1.5211 27 1 2.1206 -0.3643 -2.4111 28 1 3.5739 -0.8778 -1.5214 29 1 2.1207 -1.9059 1.5211 30 1 2.1207 -0.3644 2.4111 31 1 6.4747 -1.6889 1.3029 32 1 8.9393 2.8337 3.4386 33 1 9.0043 3.3020 0.5740 34 1 6.2758 2.4972 2.4150 RHF calculation, no. of doubly occupied orbitals= 45 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_1458_6894092_4858416.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:52:29 Heat of formation + Delta-G solvation = -120.683594 kcal Electronic energy + Delta-G solvation = -17127.613824 eV Core-core repulsion = 14276.254020 eV Total energy + Delta-G solvation = -2851.359804 eV No. of doubly occupied orbitals = 45 Molecular weight (most abundant/longest-lived isotopes) = 274.065 amu Computer time = 0.26 seconds Orbital eigenvalues (eV) -41.36824 -39.09265 -37.48579 -36.95973 -32.05864 -29.71566 -28.50067 -28.33547 -28.27201 -27.04129 -25.47590 -22.27353 -20.64095 -18.95034 -18.50931 -17.76143 -17.36021 -17.23595 -16.37162 -15.81870 -15.31880 -14.59564 -14.54934 -14.30980 -14.17992 -14.01205 -13.85538 -13.74275 -13.66001 -13.39041 -13.23432 -13.04913 -12.96254 -12.71771 -12.44710 -12.43831 -12.26877 -11.91067 -11.30969 -10.91109 -10.75264 -10.67717 -10.38608 -10.05308 -9.62528 -0.45724 0.22353 0.58172 0.71203 1.00295 1.30088 1.40402 1.47988 1.55764 1.80215 1.83666 2.02733 2.15328 2.53942 3.28888 3.56576 3.89927 4.03686 4.20519 4.25809 4.43866 4.63734 4.66401 4.68031 4.69013 4.72629 4.75626 4.92083 4.94720 4.97847 5.13526 5.40393 5.44223 5.50106 5.76868 6.40135 6.85201 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.446 4.446 2 Si 0.998 3.002 3 C -0.436 4.436 4 C -0.446 4.446 5 C -0.237 4.237 6 O -0.334 6.334 7 C 0.512 3.488 8 O -0.486 6.486 9 C -0.151 4.151 10 C -0.173 4.173 11 S 0.187 5.813 12 C -0.246 4.246 13 C -0.038 4.038 14 O -0.532 6.532 15 Si 0.892 3.108 16 H -0.233 1.233 17 H -0.225 1.225 18 H -0.232 1.232 19 C -0.048 4.048 20 H 0.071 0.929 21 H 0.075 0.925 22 H 0.070 0.930 23 H 0.066 0.934 24 H 0.062 0.938 25 H 0.077 0.923 26 H 0.070 0.930 27 H 0.071 0.929 28 H 0.069 0.931 29 H 0.110 0.890 30 H 0.081 0.919 31 H 0.182 0.818 32 H 0.128 0.872 33 H 0.378 0.622 34 H 0.161 0.839 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.694 -2.614 -1.246 3.355 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.554 4.554 2 Si 1.194 2.806 3 C -0.544 4.544 4 C -0.554 4.554 5 C -0.356 4.356 6 O -0.251 6.251 7 C 0.354 3.646 8 O -0.375 6.375 9 C -0.167 4.167 10 C -0.311 4.311 11 S 0.454 5.546 12 C -0.363 4.363 13 C -0.151 4.151 14 O -0.337 6.337 15 Si 0.711 3.289 16 H -0.155 1.155 17 H -0.147 1.147 18 H -0.154 1.154 19 C -0.077 4.077 20 H 0.091 0.909 21 H 0.094 0.906 22 H 0.089 0.911 23 H 0.085 0.915 24 H 0.081 0.919 25 H 0.096 0.904 26 H 0.089 0.911 27 H 0.090 0.910 28 H 0.089 0.911 29 H 0.128 0.872 30 H 0.100 0.900 31 H 0.200 0.800 32 H 0.146 0.854 33 H 0.226 0.774 34 H 0.179 0.821 Dipole moment (debyes) X Y Z Total from point charges 3.590 -3.149 -0.875 4.854 hybrid contribution -2.036 0.385 -0.084 2.074 sum 1.554 -2.764 -0.960 3.313 Atomic orbital electron populations 1.26039 1.19739 1.04677 1.04983 0.79716 0.67627 0.67784 0.65469 1.26240 1.06163 1.17827 1.04198 1.26059 1.06450 1.07938 1.14908 1.28362 0.79380 1.10437 1.17422 1.86468 1.22622 1.35541 1.80426 1.20398 0.88085 0.81456 0.74639 1.90871 1.66085 1.36278 1.44280 1.19437 0.90572 0.94541 1.12112 1.25993 0.98655 1.03943 1.02485 1.83302 1.03791 1.03611 1.63907 1.24771 0.98900 0.99364 1.13246 1.24378 1.04935 0.88316 0.97436 1.86557 1.94416 1.33146 1.19578 0.86301 0.76904 0.82124 0.83568 1.15540 1.14664 1.15444 1.20991 0.91495 0.97902 0.97270 0.90938 0.90634 0.91065 0.91496 0.91916 0.90387 0.91093 0.90953 0.91131 0.87214 0.90035 0.80029 0.85423 0.77406 0.82114 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.45 0.50 8.65 101.05 0.87 1.37 16 2 Si 1.00 -1.08 12.12 -169.99 -2.06 -3.14 16 3 C -0.44 -0.66 7.10 101.05 0.72 0.06 16 4 C -0.45 0.31 8.65 101.05 0.87 1.18 16 5 C -0.24 -0.01 5.40 101.05 0.55 0.54 16 6 O -0.33 -0.61 9.57 -40.75 -0.39 -1.00 16 7 C 0.51 1.51 6.70 34.30 0.23 1.74 16 8 O -0.49 -2.27 12.50 -19.32 -0.24 -2.51 16 9 C -0.15 -0.25 5.98 -104.65 -0.63 -0.88 16 10 C -0.17 0.04 10.55 29.96 0.32 0.36 16 11 S 0.19 -0.18 20.18 -107.50 -2.17 -2.35 16 12 C -0.25 0.05 5.68 -36.19 -0.21 -0.15 16 13 C -0.04 0.04 2.95 36.00 0.11 0.15 16 14 O -0.53 0.20 12.85 -35.23 -0.45 -0.26 16 15 Si 0.89 -1.35 26.19 -169.99 -4.45 -5.81 16 16 H -0.23 0.35 7.11 56.52 0.40 0.76 16 17 H -0.22 0.10 7.11 56.52 0.40 0.50 16 18 H -0.23 0.26 7.11 56.52 0.40 0.67 16 19 C -0.05 -0.06 9.91 -39.01 -0.39 -0.45 16 20 H 0.07 -0.07 7.96 -51.93 -0.41 -0.48 16 21 H 0.07 -0.08 7.96 -51.93 -0.41 -0.50 16 22 H 0.07 -0.12 7.96 -51.93 -0.41 -0.53 16 23 H 0.07 0.19 6.28 -51.93 -0.33 -0.14 16 24 H 0.06 0.05 7.96 -51.93 -0.41 -0.36 16 25 H 0.08 0.20 7.42 -51.93 -0.39 -0.18 16 26 H 0.07 -0.09 7.96 -51.93 -0.41 -0.50 16 27 H 0.07 -0.06 7.96 -51.93 -0.41 -0.47 16 28 H 0.07 -0.01 7.96 -51.93 -0.41 -0.42 16 29 H 0.11 -0.22 7.96 -51.93 -0.41 -0.63 16 30 H 0.08 0.04 7.53 -51.93 -0.39 -0.35 16 31 H 0.18 -0.36 8.02 -52.48 -0.42 -0.78 16 32 H 0.13 -0.26 7.96 -51.92 -0.41 -0.67 16 33 H 0.38 -1.36 8.70 45.56 0.40 -0.96 16 34 H 0.16 0.24 8.06 -52.49 -0.42 -0.18 16 LS Contribution 303.96 15.07 4.58 4.58 Total: 0.00 -4.99 303.96 -6.81 -11.80 By element: Atomic # 1 Polarization: -1.18 SS G_CDS: -4.07 Total: -5.24 kcal Atomic # 6 Polarization: 1.48 SS G_CDS: 2.45 Total: 3.93 kcal Atomic # 8 Polarization: -2.68 SS G_CDS: -1.08 Total: -3.76 kcal Atomic # 14 Polarization: -2.43 SS G_CDS: -6.51 Total: -8.95 kcal Atomic # 16 Polarization: -0.18 SS G_CDS: -2.17 Total: -2.35 kcal Total LS contribution 4.58 Total: 4.58 kcal Total: -4.99 -6.81 -11.80 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_1458_6894092_4858416.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -108.886 kcal (2) G-P(sol) polarization free energy of solvation -4.992 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -113.878 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.805 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -11.797 kcal (6) G-S(sol) free energy of system = (1) + (5) -120.684 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.26 seconds