Wall clock time and date at job start Tue Mar 9 2021 13:25:35 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42891 * 1 3 3 C 1.42898 * 113.99915 * 2 1 4 4 C 1.53004 * 112.85085 * 294.12946 * 3 2 1 5 5 F 1.39899 * 109.47146 * 195.74543 * 4 3 2 6 6 F 1.39892 * 109.47133 * 315.75055 * 4 3 2 7 7 F 1.39901 * 109.46899 * 75.75239 * 4 3 2 8 8 C 1.53786 * 113.61477 * 162.82351 * 3 2 1 9 9 C 1.53775 * 87.08153 * 270.88461 * 8 3 2 10 10 H 1.09001 * 113.69623 * 220.00627 * 9 8 3 11 11 C 1.53002 * 113.61616 * 89.11478 * 9 8 3 12 12 O 1.45203 * 109.46954 * 87.50264 * 11 9 8 13 13 C 1.34753 * 116.99622 * 180.02562 * 12 11 9 14 14 O 1.21503 * 120.00327 * 359.97438 * 13 12 11 15 15 C 1.47523 * 119.99498 * 180.02562 * 13 12 11 16 16 C 1.38215 * 119.29287 * 179.97438 * 15 13 12 17 17 C 1.40597 * 119.34431 * 179.97438 * 16 15 13 18 18 N 1.32033 * 135.61424 * 179.67973 * 17 16 15 19 19 N 1.28493 * 110.76901 * 179.97438 * 18 17 16 20 20 C 1.34187 * 112.09557 * 0.38413 * 19 18 17 21 21 C 1.50706 * 126.54557 * 179.78778 * 20 19 18 22 22 O 1.42896 * 109.46946 * 104.97595 * 21 20 19 23 23 Si 1.86305 * 109.47031 * 344.98301 * 21 20 19 24 24 C 1.38141 * 106.91354 * 359.77435 * 20 19 18 25 25 C 1.40912 * 136.20135 * 179.97438 * 24 20 19 26 26 C 1.35361 * 119.75972 * 180.02562 * 25 24 20 27 27 C 1.53780 * 113.61385 * 65.32820 * 3 2 1 28 28 H 1.09001 * 109.47276 * 183.09261 * 1 2 3 29 29 H 1.08997 * 109.47308 * 303.08948 * 1 2 3 30 30 H 1.08998 * 109.47494 * 63.09282 * 1 2 3 31 31 H 1.08997 * 113.61221 * 156.33499 * 8 3 2 32 32 H 1.09002 * 113.61062 * 25.43530 * 8 3 2 33 33 H 1.09007 * 109.47009 * 327.50426 * 11 9 8 34 34 H 1.09001 * 109.47570 * 207.50360 * 11 9 8 35 35 H 1.07998 * 120.32656 * 359.97438 * 16 15 13 36 36 H 0.97009 * 123.94958 * 180.19831 * 19 18 17 37 37 H 1.08993 * 109.47297 * 224.98244 * 21 20 19 38 38 H 0.96701 * 114.00425 * 300.00929 * 22 21 20 39 39 H 1.48493 * 109.99964 * 179.97438 * 23 21 20 40 40 H 1.48500 * 109.99814 * 301.31621 * 23 21 20 41 41 H 1.07992 * 120.12348 * 0.05434 * 25 24 20 42 42 H 1.07993 * 119.23799 * 179.97438 * 26 25 24 43 43 H 1.09000 * 113.61285 * 334.56795 * 27 3 2 44 44 H 1.09007 * 113.61415 * 203.66486 * 27 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4289 0.0000 0.0000 3 6 2.0101 1.3054 0.0000 4 6 1.7252 2.0827 -1.2868 5 9 2.5967 3.1735 -1.3754 6 9 1.9146 1.2436 -2.3900 7 9 0.4038 2.5418 -1.2713 8 6 3.4905 1.3207 0.4161 9 6 3.0003 1.4808 1.8648 10 1 3.5973 2.1762 2.4549 11 6 2.7580 0.1504 2.5805 12 8 3.9935 -0.3001 3.1961 13 6 3.9512 -1.4658 3.8707 14 8 2.9104 -2.0886 3.9430 15 6 5.1684 -1.9853 4.5225 16 6 5.1084 -3.1822 5.2111 17 6 6.2680 -3.6786 5.8322 18 7 6.5708 -4.7434 6.5519 19 7 7.8105 -4.7276 6.8895 20 6 8.4454 -3.6392 6.4283 21 6 9.8971 -3.2917 6.6359 22 8 10.6218 -3.5319 5.4280 23 14 10.5991 -4.3470 8.0014 24 6 7.5146 -2.8980 5.7265 25 6 7.5113 -1.6844 5.0105 26 6 6.3684 -1.2500 4.4297 27 6 1.7233 2.1074 1.2804 28 1 -0.3634 -1.0262 0.0554 29 1 -0.3634 0.5610 0.8610 30 1 -0.3634 0.4650 -0.9164 31 1 4.0400 2.1849 0.0431 32 1 4.0057 0.3781 0.2311 33 1 2.4190 -0.5936 1.8595 34 1 1.9969 0.2846 3.3492 35 1 4.1801 -3.7307 5.2714 36 1 8.2368 -5.4201 7.4185 37 1 9.9836 -2.2400 6.9086 38 1 10.5885 -4.4496 5.1251 39 1 12.0304 -4.0145 8.2156 40 1 9.8337 -4.1302 9.2553 41 1 8.4174 -1.1032 4.9250 42 1 6.3753 -0.3185 3.8833 43 1 0.8120 1.8000 1.7932 44 1 1.7898 3.1868 1.1436 There are 70 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 70 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_1458_7964246_17321610.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:25:35 Heat of formation + Delta-G solvation = -171.704102 kcal Electronic energy + Delta-G solvation = -35858.417228 eV Core-core repulsion = 30331.174646 eV Total energy + Delta-G solvation = -5527.242582 eV No. of doubly occupied orbitals = 70 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 387.117 amu Computer time = 1.23 seconds Orbital eigenvalues (eV) -51.14554 -48.69275 -48.57698 -43.82162 -41.79603 -41.00581 -38.54824 -38.14367 -37.56929 -36.82988 -33.53238 -32.45248 -31.00156 -30.69072 -28.35345 -27.71278 -27.03742 -26.88060 -25.97595 -23.93162 -23.36646 -22.22589 -21.26953 -20.70923 -19.79095 -19.48049 -19.42758 -19.19925 -19.05386 -18.21603 -17.80717 -17.47956 -17.42642 -17.21010 -17.00321 -16.53432 -16.07165 -15.81334 -15.70955 -15.59013 -15.48428 -15.44123 -15.29152 -15.08551 -14.93715 -14.79712 -14.73997 -14.64609 -14.43015 -14.23258 -13.92588 -13.54961 -13.44528 -13.33195 -13.23225 -12.97365 -12.81567 -12.65289 -12.38477 -12.36604 -12.11172 -11.74827 -11.59162 -11.52038 -11.43870 -11.34357 -10.82878 -10.79884 -9.97409 -8.86449 -5.50598 -0.70859 0.16690 0.80206 1.22721 1.29958 1.42691 1.57428 1.61186 1.63687 1.70939 2.02630 2.55915 2.64290 2.75887 2.84389 2.99126 3.08829 3.23901 3.24650 3.34405 3.44634 3.60792 3.77388 3.88031 3.95570 4.09867 4.11032 4.17175 4.21246 4.24686 4.27847 4.33246 4.39823 4.43401 4.47350 4.54357 4.59630 4.68844 4.73211 4.89575 4.91657 5.15458 5.26479 5.38008 5.48510 5.64725 5.66277 5.72038 6.22973 6.69700 6.80739 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.010 3.990 2 O -0.332 6.332 3 C 0.037 3.963 4 C 0.437 3.563 5 F -0.175 7.175 6 F -0.174 7.174 7 F -0.182 7.182 8 C -0.112 4.112 9 C -0.099 4.099 10 H 0.108 0.892 11 C 0.078 3.922 12 O -0.348 6.348 13 C 0.513 3.487 14 O -0.503 6.503 15 C -0.101 4.101 16 C 0.007 3.993 17 C 0.045 3.955 18 N -0.268 5.268 19 N -0.325 5.325 20 C -0.016 4.016 21 C -0.030 4.030 22 O -0.529 6.529 23 Si 0.672 3.328 24 C -0.122 4.122 25 C -0.062 4.062 26 C -0.097 4.097 27 C -0.143 4.143 28 H 0.103 0.897 29 H 0.055 0.945 30 H 0.053 0.947 31 H 0.117 0.883 32 H 0.100 0.900 33 H 0.093 0.907 34 H 0.076 0.924 35 H 0.148 0.852 36 H 0.446 0.554 37 H 0.134 0.866 38 H 0.382 0.618 39 H -0.237 1.237 40 H -0.246 1.246 41 H 0.134 0.866 42 H 0.140 0.860 43 H 0.095 0.905 44 H 0.114 0.886 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.816 -0.828 2.897 4.863 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.085 4.085 2 O -0.249 6.249 3 C -0.005 4.005 4 C 0.383 3.617 5 F -0.156 7.156 6 F -0.155 7.155 7 F -0.163 7.163 8 C -0.149 4.149 9 C -0.118 4.118 10 H 0.126 0.874 11 C 0.005 3.995 12 O -0.265 6.265 13 C 0.358 3.642 14 O -0.391 6.391 15 C -0.106 4.106 16 C -0.013 4.013 17 C -0.101 4.101 18 N -0.105 5.105 19 N -0.036 5.036 20 C -0.150 4.150 21 C -0.143 4.143 22 O -0.333 6.333 23 Si 0.571 3.429 24 C -0.130 4.130 25 C -0.082 4.082 26 C -0.116 4.116 27 C -0.181 4.181 28 H 0.121 0.879 29 H 0.074 0.926 30 H 0.072 0.928 31 H 0.136 0.864 32 H 0.118 0.882 33 H 0.111 0.889 34 H 0.094 0.906 35 H 0.166 0.834 36 H 0.293 0.707 37 H 0.151 0.849 38 H 0.229 0.771 39 H -0.160 1.160 40 H -0.170 1.170 41 H 0.152 0.848 42 H 0.158 0.842 43 H 0.114 0.886 44 H 0.132 0.868 Dipole moment (debyes) X Y Z Total from point charges 3.587 -1.521 4.162 5.701 hybrid contribution -0.288 1.150 -0.610 1.333 sum 3.300 -0.371 3.551 4.862 Atomic orbital electron populations 1.23151 0.79394 1.04497 1.01507 1.88099 1.21235 1.21787 1.93812 1.24057 1.00110 0.86413 0.89938 1.21173 0.74304 0.78712 0.87554 1.93179 1.69510 1.56327 1.96612 1.93220 1.94766 1.70951 1.56576 1.93191 1.36531 1.89758 1.96843 1.23277 0.90882 1.05837 0.94917 1.22106 0.97603 0.96456 0.95616 0.87350 1.23012 0.83883 0.95534 0.97082 1.86483 1.38783 1.37848 1.63346 1.20995 0.88375 0.78801 0.76052 1.90876 1.32204 1.58042 1.58010 1.18697 0.92252 0.96605 1.03055 1.20246 0.96150 0.93091 0.91859 1.20346 0.95174 0.93225 1.01337 1.73651 0.96271 1.22426 1.18145 1.43448 1.06349 1.17527 1.36306 1.21824 0.97104 0.91481 1.04594 1.24551 0.85327 1.07496 0.96903 1.86593 1.71827 1.33927 1.40939 0.95672 0.82718 0.87374 0.77172 1.19385 0.92472 0.98004 1.03122 1.20051 0.98505 0.93505 0.96163 1.20735 0.90837 1.00188 0.99852 1.23605 0.99647 1.01136 0.93682 0.87892 0.92599 0.92795 0.86448 0.88191 0.88876 0.90559 0.83412 0.70682 0.84922 0.77063 1.15966 1.17000 0.84845 0.84181 0.88628 0.86818 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 -0.01 10.33 101.05 1.04 1.04 16 2 O -0.33 -0.29 8.36 -35.23 -0.29 -0.59 16 3 C 0.04 -0.01 0.84 -89.80 -0.08 -0.09 16 4 C 0.44 0.53 2.52 37.16 0.09 0.62 16 5 F -0.17 -0.19 15.82 2.25 0.04 -0.16 16 6 F -0.17 -0.53 17.11 2.25 0.04 -0.49 16 7 F -0.18 -0.28 15.34 2.25 0.03 -0.25 16 8 C -0.11 0.15 6.89 -25.92 -0.18 -0.02 16 9 C -0.10 0.19 4.21 -89.81 -0.38 -0.19 16 10 H 0.11 -0.32 8.14 -51.93 -0.42 -0.74 16 11 C 0.08 0.02 5.06 37.16 0.19 0.20 16 12 O -0.35 -0.51 9.37 -40.64 -0.38 -0.89 16 13 C 0.51 1.60 7.88 34.52 0.27 1.87 16 14 O -0.50 -2.80 16.04 -19.27 -0.31 -3.11 16 15 C -0.10 -0.22 5.86 -105.06 -0.62 -0.83 16 16 C 0.01 0.02 9.64 -38.70 -0.37 -0.35 16 17 C 0.05 0.12 7.53 -83.14 -0.63 -0.51 16 18 N -0.27 -0.50 12.20 33.21 0.41 -0.09 16 19 N -0.33 0.48 6.26 33.87 0.21 0.69 16 20 C -0.02 0.02 6.19 -81.60 -0.51 -0.49 16 21 C -0.03 0.09 3.03 36.01 0.11 0.20 16 22 O -0.53 1.22 12.88 -35.23 -0.45 0.76 16 23 Si 0.67 -2.86 31.14 -169.99 -5.29 -8.15 16 24 C -0.12 -0.16 6.38 -105.17 -0.67 -0.83 16 25 C -0.06 -0.03 10.05 -39.60 -0.40 -0.42 16 26 C -0.10 -0.06 9.47 -39.55 -0.37 -0.43 16 27 C -0.14 0.32 6.52 -25.92 -0.17 0.15 16 28 H 0.10 -0.18 8.14 -51.93 -0.42 -0.60 16 29 H 0.06 -0.12 6.60 -51.93 -0.34 -0.46 16 30 H 0.05 -0.02 6.56 -51.93 -0.34 -0.36 16 31 H 0.12 -0.29 7.03 -51.93 -0.37 -0.66 16 32 H 0.10 -0.08 8.10 -51.93 -0.42 -0.50 16 33 H 0.09 0.13 6.12 -51.93 -0.32 -0.19 16 34 H 0.08 0.00 8.14 -51.93 -0.42 -0.42 16 35 H 0.15 0.35 7.57 -52.49 -0.40 -0.04 16 36 H 0.45 -2.35 6.88 -190.42 -1.31 -3.66 16 37 H 0.13 -0.37 7.96 -51.93 -0.41 -0.79 16 38 H 0.38 -2.32 8.70 45.56 0.40 -1.93 16 39 H -0.24 0.21 7.11 56.52 0.40 0.61 16 40 H -0.25 0.41 7.11 56.52 0.40 0.82 16 41 H 0.13 -0.18 8.06 -52.49 -0.42 -0.60 16 42 H 0.14 -0.14 7.51 -52.49 -0.39 -0.54 16 43 H 0.10 -0.27 6.64 -51.93 -0.34 -0.62 16 44 H 0.11 -0.37 8.04 -51.93 -0.42 -0.79 16 LS Contribution 381.30 15.07 5.75 5.75 Total: 0.00 -9.61 381.30 -8.47 -18.08 By element: Atomic # 1 Polarization: -5.92 SS G_CDS: -5.56 Total: -11.47 kcal Atomic # 6 Polarization: 2.57 SS G_CDS: -2.66 Total: -0.09 kcal Atomic # 7 Polarization: -0.02 SS G_CDS: 0.62 Total: 0.60 kcal Atomic # 8 Polarization: -2.39 SS G_CDS: -1.44 Total: -3.83 kcal Atomic # 9 Polarization: -1.00 SS G_CDS: 0.11 Total: -0.89 kcal Atomic # 14 Polarization: -2.86 SS G_CDS: -5.29 Total: -8.15 kcal Total LS contribution 5.75 Total: 5.75 kcal Total: -9.61 -8.47 -18.08 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_1458_7964246_17321610.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -153.623 kcal (2) G-P(sol) polarization free energy of solvation -9.607 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -163.231 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.474 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.081 kcal (6) G-S(sol) free energy of system = (1) + (5) -171.704 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.23 seconds