Wall clock time and date at job start Tue Mar 9 2021 13:34:23 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50704 * 1 3 3 C 1.37848 * 125.89379 * 2 1 4 4 C 1.47105 * 127.02535 * 359.96389 * 3 2 1 5 5 O 1.21544 * 120.00212 * 0.02562 * 4 3 2 6 6 O 1.34790 * 119.99689 * 179.97438 * 4 3 2 7 7 C 1.45199 * 116.99877 * 180.02562 * 6 4 3 8 8 C 1.52996 * 109.47089 * 180.02562 * 7 6 4 9 9 H 1.09002 * 109.47064 * 179.97438 * 8 7 6 10 10 O 1.42965 * 109.47158 * 299.99656 * 8 7 6 11 11 C 1.43089 * 113.76880 * 178.79357 * 10 8 7 12 12 C 1.53258 * 108.94690 * 302.03141 * 11 10 8 13 13 H 1.08999 * 109.67944 * 294.65446 * 12 11 10 14 14 N 1.46503 * 109.57807 * 174.33082 * 12 11 10 15 15 C 1.34524 * 124.45774 * 120.63786 * 14 12 11 16 16 O 1.21453 * 125.70963 * 359.97438 * 15 14 12 17 17 C 1.47810 * 108.58056 * 180.24432 * 15 14 12 18 18 C 1.40954 * 105.87965 * 359.57494 * 17 15 14 19 19 C 1.38556 * 119.82165 * 180.16364 * 18 17 15 20 20 C 1.38618 * 119.71983 * 359.57828 * 19 18 17 21 21 C 1.38232 * 120.45614 * 0.60824 * 20 19 18 22 22 C 1.38561 * 134.30136 * 179.73829 * 17 15 14 23 23 C 1.34519 * 124.46271 * 300.61731 * 14 12 11 24 24 O 1.21451 * 125.70564 * 0.02562 * 23 14 12 25 25 C 1.53262 * 108.84424 * 54.52346 * 12 11 10 26 26 O 1.42973 * 109.47260 * 59.99903 * 8 7 6 27 27 C 1.46744 * 105.94849 * 180.22316 * 3 2 1 28 28 C 1.34442 * 106.37458 * 359.62984 * 27 3 2 29 29 C 1.50692 * 125.45625 * 180.09902 * 28 27 3 30 30 O 1.42902 * 109.46966 * 120.31765 * 29 28 27 31 31 Si 1.86301 * 109.47514 * 0.31928 * 29 28 27 32 32 N 1.34621 * 125.89571 * 179.97438 * 2 1 3 33 33 H 1.08993 * 109.47012 * 89.99869 * 1 2 3 34 34 H 1.09000 * 109.47288 * 210.00445 * 1 2 3 35 35 H 1.09003 * 109.47140 * 330.00069 * 1 2 3 36 36 H 1.08994 * 109.47304 * 59.99698 * 7 6 4 37 37 H 1.09007 * 109.46922 * 300.00072 * 7 6 4 38 38 H 1.09005 * 109.55905 * 182.19250 * 11 10 8 39 39 H 1.09006 * 109.55822 * 61.87081 * 11 10 8 40 40 H 1.08000 * 120.14105 * 180.30037 * 19 18 17 41 41 H 1.07998 * 119.77475 * 180.18491 * 20 19 18 42 42 H 1.08006 * 119.76976 * 179.58073 * 21 20 19 43 43 H 1.08004 * 120.13737 * 0.02562 * 22 17 15 44 44 H 1.09004 * 109.55647 * 65.31546 * 25 12 11 45 45 H 1.08994 * 109.55779 * 185.53256 * 25 12 11 46 46 H 1.07997 * 126.81281 * 179.76970 * 27 3 2 47 47 H 1.09000 * 109.47571 * 240.31489 * 29 28 27 48 48 H 0.96703 * 114.00388 * 299.99769 * 30 29 28 49 49 H 1.48497 * 110.00358 * 179.97438 * 31 29 28 50 50 H 1.48502 * 109.99997 * 301.31918 * 31 29 28 51 51 H 0.97001 * 124.81046 * 359.97438 * 32 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.3152 1.1167 0.0000 4 6 1.8831 2.5229 -0.0007 5 8 0.6985 2.7947 -0.0010 6 8 2.8011 3.5099 -0.0001 7 6 2.3026 4.8737 -0.0003 8 6 3.4823 5.8479 -0.0002 9 1 3.1081 6.8716 -0.0008 10 8 4.2786 5.6318 1.1673 11 6 5.4280 6.4804 1.2466 12 6 6.2933 6.2639 0.0004 13 1 6.6878 5.2479 -0.0006 14 7 7.4024 7.2212 0.0005 15 6 8.7033 6.8788 -0.0054 16 8 9.1378 5.7447 -0.0110 17 6 9.5154 8.1138 0.0028 18 6 8.5945 9.1809 0.0037 19 6 9.0544 10.4879 0.0074 20 6 10.4180 10.7366 0.0191 21 6 11.3211 9.6901 0.0145 22 6 10.8756 8.3775 0.0064 23 6 7.2539 8.5581 0.0060 24 8 6.1956 9.1538 0.0121 25 6 5.4285 6.4802 -1.2464 26 8 4.2792 5.6315 -1.1674 27 6 3.6946 0.6161 -0.0055 28 6 3.6109 -0.7257 0.0000 29 6 4.7816 -1.6745 -0.0005 30 8 4.7276 -2.4983 1.1660 31 14 6.3701 -0.7011 -0.0003 32 7 2.2963 -1.0905 0.0005 33 1 -0.3633 0.0000 -1.0276 34 1 -0.3634 -0.8899 0.5139 35 1 -0.3633 0.8900 0.5138 36 1 1.6947 5.0384 0.8892 37 1 1.6957 5.0385 -0.8907 38 1 6.0039 6.2324 2.1383 39 1 5.1100 7.5220 1.2937 40 1 8.3533 11.3095 0.0129 41 1 10.7774 11.7550 0.0250 42 1 12.3813 9.8966 0.0169 43 1 11.5858 7.5638 0.0024 44 1 5.1106 7.5217 -1.2937 45 1 6.0054 6.2338 -2.1377 46 1 4.5979 1.2082 -0.0105 47 1 4.7402 -2.3022 -0.8907 48 1 4.7602 -2.0055 1.9974 49 1 7.5323 -1.6255 -0.0002 50 1 6.4240 0.1832 -1.1920 51 1 1.9758 -2.0061 0.0013 There are 78 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 78 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_1458_9864948_13594054.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:34:23 Heat of formation + Delta-G solvation = -153.713100 kcal Electronic energy + Delta-G solvation = -41865.057256 eV Core-core repulsion = 36278.005612 eV Total energy + Delta-G solvation = -5587.051645 eV No. of doubly occupied orbitals = 78 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 429.144 amu Computer time = 1.56 seconds Orbital eigenvalues (eV) -43.66010 -42.42683 -41.27993 -40.53577 -39.79788 -39.56957 -37.81509 -37.23101 -36.94717 -36.90001 -34.51336 -32.95034 -32.37802 -32.36075 -31.58967 -29.81749 -29.02592 -27.35483 -26.33358 -25.98850 -25.36355 -24.26724 -23.55068 -23.23638 -22.27362 -21.52645 -21.00190 -20.56585 -19.21245 -18.99816 -18.98163 -18.71675 -18.06599 -17.72052 -17.55386 -17.30198 -17.02481 -16.89776 -16.71445 -16.45388 -16.38482 -16.14995 -16.02029 -15.89421 -15.59807 -15.34901 -15.26188 -15.23526 -15.14841 -14.64162 -14.61923 -14.56998 -14.21147 -14.02059 -13.99202 -13.93332 -13.84486 -13.53121 -13.42728 -13.18625 -12.97060 -12.85213 -12.64066 -12.30391 -12.12005 -12.06393 -11.94691 -11.68514 -11.54729 -11.49515 -11.19527 -10.80568 -10.73070 -10.70331 -10.44751 -10.41056 -9.92070 -9.18192 -4.97081 -1.15670 -0.25454 0.57754 0.81770 0.94407 1.15651 1.24977 1.67244 1.69035 1.75673 1.96700 2.32027 2.35505 2.37860 2.38684 2.41675 2.43035 3.07880 3.25283 3.34706 3.36847 3.37195 3.54119 3.59608 3.69569 3.76938 3.82197 3.86878 3.90825 3.96844 4.04114 4.11578 4.17064 4.18073 4.19581 4.27422 4.33256 4.36630 4.43408 4.50878 4.53672 4.55121 4.63678 4.66520 4.72474 4.80393 4.89661 4.95006 4.99662 5.12139 5.34429 5.42822 5.52435 5.62562 5.68249 5.88060 5.88827 5.99359 6.35151 6.43908 6.45197 7.10781 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.101 4.101 2 C 0.129 3.871 3 C -0.224 4.224 4 C 0.544 3.456 5 O -0.522 6.522 6 O -0.331 6.331 7 C 0.087 3.913 8 C 0.245 3.755 9 H 0.087 0.913 10 O -0.368 6.368 11 C 0.048 3.952 12 C 0.074 3.926 13 H 0.131 0.869 14 N -0.570 5.570 15 C 0.576 3.424 16 O -0.452 6.452 17 C -0.140 4.140 18 C -0.143 4.143 19 C -0.042 4.042 20 C -0.094 4.094 21 C -0.093 4.093 22 C -0.042 4.042 23 C 0.575 3.425 24 O -0.459 6.459 25 C 0.047 3.953 26 O -0.369 6.369 27 C -0.129 4.129 28 C -0.024 4.024 29 C -0.047 4.047 30 O -0.545 6.545 31 Si 0.713 3.287 32 N -0.529 5.529 33 H 0.083 0.917 34 H 0.070 0.930 35 H 0.103 0.897 36 H 0.097 0.903 37 H 0.096 0.904 38 H 0.110 0.890 39 H 0.074 0.926 40 H 0.144 0.856 41 H 0.145 0.855 42 H 0.145 0.855 43 H 0.145 0.855 44 H 0.074 0.926 45 H 0.109 0.891 46 H 0.158 0.842 47 H 0.114 0.886 48 H 0.383 0.617 49 H -0.252 1.252 50 H -0.251 1.251 51 H 0.421 0.579 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.420 4.218 1.626 6.323 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.158 4.158 2 C 0.009 3.991 3 C -0.232 4.232 4 C 0.391 3.609 5 O -0.413 6.413 6 O -0.247 6.247 7 C 0.013 3.987 8 C 0.150 3.850 9 H 0.104 0.896 10 O -0.287 6.287 11 C -0.030 4.030 12 C -0.028 4.028 13 H 0.149 0.851 14 N -0.315 5.315 15 C 0.365 3.635 16 O -0.322 6.322 17 C -0.144 4.144 18 C -0.146 4.146 19 C -0.060 4.060 20 C -0.112 4.112 21 C -0.111 4.111 22 C -0.061 4.061 23 C 0.365 3.635 24 O -0.330 6.330 25 C -0.030 4.030 26 O -0.288 6.288 27 C -0.152 4.152 28 C -0.133 4.133 29 C -0.158 4.158 30 O -0.350 6.350 31 Si 0.613 3.387 32 N -0.125 5.125 33 H 0.102 0.898 34 H 0.089 0.911 35 H 0.121 0.879 36 H 0.115 0.885 37 H 0.114 0.886 38 H 0.128 0.872 39 H 0.092 0.908 40 H 0.162 0.838 41 H 0.163 0.837 42 H 0.163 0.837 43 H 0.162 0.838 44 H 0.092 0.908 45 H 0.127 0.873 46 H 0.175 0.825 47 H 0.131 0.869 48 H 0.231 0.769 49 H -0.177 1.177 50 H -0.175 1.175 51 H 0.259 0.741 Dipole moment (debyes) X Y Z Total from point charges 4.265 3.231 0.749 5.403 hybrid contribution -0.558 -0.229 -0.376 0.710 sum 3.708 3.002 0.372 4.785 Atomic orbital electron populations 1.20675 0.86315 1.04767 1.04030 1.20677 0.93729 0.85215 0.99526 1.19211 0.93342 0.88706 1.21960 1.20029 0.83454 0.85328 0.72100 1.90819 1.18009 1.84525 1.47984 1.86667 1.38765 1.15018 1.84289 1.23027 0.93384 0.77855 1.04449 1.23678 0.87565 0.97506 0.76301 0.89614 1.88264 1.37112 1.61454 1.41881 1.23019 0.86845 0.95841 0.97254 1.22680 0.86781 0.94678 0.98634 0.85124 1.46458 1.08384 1.08279 1.68415 1.18404 0.81563 0.88877 0.74635 1.90856 1.75602 1.22698 1.43057 1.20478 0.95025 0.93080 1.05775 1.20471 0.93004 0.95136 1.06005 1.20856 0.96118 0.94594 0.94478 1.21557 0.92231 1.00551 0.96832 1.21559 1.01121 0.91661 0.96716 1.20866 0.92936 0.97818 0.94472 1.18453 0.89289 0.81318 0.74428 1.90818 1.31401 1.67106 1.43662 1.23012 0.86881 0.95807 0.97303 1.88268 1.37111 1.61450 1.41977 1.21877 0.96409 0.92054 1.04905 1.20820 0.84925 0.94906 1.12626 1.24843 1.02807 0.96949 0.91176 1.86485 1.96955 1.35936 1.15663 0.94031 0.74290 0.81118 0.89281 1.41518 1.05536 1.08739 1.56704 0.89813 0.91091 0.87857 0.88466 0.88565 0.87204 0.90777 0.83814 0.83736 0.83720 0.83761 0.90814 0.87330 0.82514 0.86877 0.76922 1.17668 1.17509 0.74072 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.10 0.00 9.90 36.01 0.36 0.35 16 2 C 0.13 0.21 7.22 -81.51 -0.59 -0.37 16 3 C -0.22 -0.79 6.33 -103.01 -0.65 -1.44 16 4 C 0.54 2.59 7.95 34.33 0.27 2.87 16 5 O -0.52 -3.14 14.67 -19.30 -0.28 -3.42 16 6 O -0.33 -1.41 9.92 -47.32 -0.47 -1.88 16 7 C 0.09 0.17 5.56 37.16 0.21 0.38 16 8 C 0.24 0.39 3.59 37.16 0.13 0.52 16 9 H 0.09 -0.04 8.14 -51.93 -0.42 -0.46 16 10 O -0.37 -0.87 10.44 -63.30 -0.66 -1.53 16 11 C 0.05 0.04 6.32 37.29 0.24 0.27 16 12 C 0.07 0.07 3.08 -67.66 -0.21 -0.14 16 13 H 0.13 0.19 7.59 -51.93 -0.39 -0.20 16 14 N -0.57 -0.50 2.53 -110.22 -0.28 -0.78 16 15 C 0.58 0.86 8.02 -12.46 -0.10 0.76 16 16 O -0.45 -1.78 17.44 5.41 0.09 -1.68 16 17 C -0.14 0.04 6.40 -104.84 -0.67 -0.64 16 18 C -0.14 0.06 6.40 -104.84 -0.67 -0.62 16 19 C -0.04 0.10 10.09 -39.32 -0.40 -0.30 16 20 C -0.09 0.37 10.04 -39.44 -0.40 -0.02 16 21 C -0.09 0.36 10.04 -39.45 -0.40 -0.03 16 22 C -0.04 0.10 10.09 -39.33 -0.40 -0.30 16 23 C 0.58 0.59 7.35 -12.46 -0.09 0.50 16 24 O -0.46 -1.24 15.16 5.41 0.08 -1.16 16 25 C 0.05 0.05 6.33 37.29 0.24 0.29 16 26 O -0.37 -0.99 10.44 -63.30 -0.66 -1.65 16 27 C -0.13 -0.26 9.47 -37.49 -0.35 -0.62 16 28 C -0.02 -0.02 6.47 -81.89 -0.53 -0.55 16 29 C -0.05 0.02 3.08 36.00 0.11 0.13 16 30 O -0.54 0.15 12.88 -35.23 -0.45 -0.31 16 31 Si 0.71 -0.38 30.55 -169.99 -5.19 -5.57 16 32 N -0.53 -0.06 5.89 -5.20 -0.03 -0.09 16 33 H 0.08 -0.03 8.14 -51.93 -0.42 -0.45 16 34 H 0.07 -0.14 8.14 -51.93 -0.42 -0.57 16 35 H 0.10 0.16 6.51 -51.93 -0.34 -0.17 16 36 H 0.10 0.09 8.14 -51.93 -0.42 -0.33 16 37 H 0.10 0.11 8.14 -51.92 -0.42 -0.31 16 38 H 0.11 -0.03 8.14 -51.93 -0.42 -0.45 16 39 H 0.07 0.06 6.65 -51.93 -0.35 -0.28 16 40 H 0.14 -0.53 8.06 -52.49 -0.42 -0.95 16 41 H 0.14 -0.91 8.06 -52.49 -0.42 -1.34 16 42 H 0.15 -0.91 8.06 -52.48 -0.42 -1.33 16 43 H 0.14 -0.51 8.06 -52.48 -0.42 -0.93 16 44 H 0.07 0.08 6.69 -51.93 -0.35 -0.27 16 45 H 0.11 0.03 8.14 -51.93 -0.42 -0.39 16 46 H 0.16 0.17 6.20 -52.49 -0.33 -0.15 16 47 H 0.11 -0.03 7.96 -51.93 -0.41 -0.45 16 48 H 0.38 -1.41 8.70 45.56 0.40 -1.02 16 49 H -0.25 -0.56 7.11 56.52 0.40 -0.15 16 50 H -0.25 -0.55 7.11 56.52 0.40 -0.15 16 51 H 0.42 -0.89 8.96 -40.82 -0.37 -1.26 16 LS Contribution 436.35 15.07 6.58 6.58 Total: 0.00 -10.90 436.35 -11.16 -22.06 By element: Atomic # 1 Polarization: -5.64 SS G_CDS: -5.98 Total: -11.62 kcal Atomic # 6 Polarization: 4.95 SS G_CDS: -3.90 Total: 1.05 kcal Atomic # 7 Polarization: -0.56 SS G_CDS: -0.31 Total: -0.87 kcal Atomic # 8 Polarization: -9.28 SS G_CDS: -2.35 Total: -11.63 kcal Atomic # 14 Polarization: -0.38 SS G_CDS: -5.19 Total: -5.57 kcal Total LS contribution 6.58 Total: 6.58 kcal Total: -10.90 -11.16 -22.06 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_1458_9864948_13594054.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -131.648 kcal (2) G-P(sol) polarization free energy of solvation -10.904 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -142.552 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.161 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.065 kcal (6) G-S(sol) free energy of system = (1) + (5) -153.713 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.56 seconds