Wall clock time and date at job start Tue Mar 9 2021 13:45:08 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42894 * 1 3 3 C 1.42899 * 114.00078 * 2 1 4 4 H 1.08996 * 112.90761 * 341.24502 * 3 2 1 5 5 C 1.53775 * 113.61519 * 112.50507 * 3 2 1 6 6 C 1.53781 * 87.08329 * 139.97852 * 5 3 2 7 7 H 1.08999 * 113.69164 * 89.12826 * 6 5 3 8 8 N 1.46500 * 113.61351 * 220.01499 * 6 5 3 9 9 C 1.46502 * 119.99764 * 37.50196 * 8 6 5 10 10 C 1.34777 * 119.99890 * 217.49523 * 8 6 5 11 11 O 1.21277 * 120.00276 * 0.02562 * 10 8 6 12 12 C 1.50698 * 119.99538 * 180.02562 * 10 8 6 13 13 N 1.46509 * 109.47085 * 179.97438 * 12 10 8 14 14 C 1.36824 * 125.06514 * 265.00565 * 13 12 10 15 15 C 1.34236 * 109.93935 * 179.97438 * 14 13 12 16 16 C 1.50702 * 126.50319 * 179.97438 * 15 14 13 17 17 O 1.42900 * 109.47362 * 254.97724 * 16 15 14 18 18 Si 1.86305 * 109.47038 * 14.97261 * 16 15 14 19 19 C 1.46493 * 106.99702 * 359.97438 * 15 14 13 20 20 C 1.39593 * 134.03132 * 179.97438 * 19 15 14 21 21 C 1.36656 * 119.76054 * 180.02562 * 20 19 15 22 22 C 1.38788 * 120.53190 * 0.02562 * 21 20 19 23 23 C 1.37793 * 120.66312 * 0.02562 * 22 21 20 24 24 C 1.37692 * 125.05901 * 84.99689 * 13 12 10 25 25 C 1.53781 * 87.08108 * 334.56497 * 6 5 3 26 26 H 1.09004 * 109.47603 * 300.00065 * 1 2 3 27 27 H 1.09004 * 109.47536 * 60.00240 * 1 2 3 28 28 H 1.09001 * 109.47606 * 180.02562 * 1 2 3 29 29 H 1.09001 * 113.61636 * 25.42337 * 5 3 2 30 30 H 1.09006 * 113.61338 * 254.52989 * 5 3 2 31 31 H 1.09011 * 109.46966 * 269.99169 * 9 8 6 32 32 H 1.08999 * 109.47698 * 29.99434 * 9 8 6 33 33 H 1.09002 * 109.46840 * 149.99839 * 9 8 6 34 34 H 1.09000 * 109.47419 * 60.00451 * 12 10 8 35 35 H 1.08993 * 109.47565 * 299.99774 * 12 10 8 36 36 H 1.07999 * 125.03296 * 359.97438 * 14 13 12 37 37 H 1.08994 * 109.47235 * 134.97198 * 16 15 14 38 38 H 0.96705 * 114.00137 * 59.99472 * 17 16 15 39 39 H 1.48494 * 110.00215 * 179.97438 * 18 16 15 40 40 H 1.48502 * 109.99968 * 301.32495 * 18 16 15 41 41 H 1.08003 * 120.11889 * 359.97438 * 20 19 15 42 42 H 1.08004 * 119.73127 * 179.97438 * 21 20 19 43 43 H 1.07995 * 119.67042 * 179.97438 * 22 21 20 44 44 H 1.08001 * 120.10544 * 180.27771 * 23 22 21 45 45 H 1.08993 * 113.61345 * 139.97823 * 25 6 5 46 46 H 1.08997 * 113.61371 * 270.88684 * 25 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4289 0.0000 0.0000 3 6 2.0102 1.3054 0.0000 4 1 1.3143 2.0797 -0.3228 5 6 2.7534 1.6488 1.3017 6 6 3.8227 2.3180 0.4221 7 1 3.6236 3.3693 0.2142 8 7 5.1935 2.0785 0.8803 9 6 5.5625 0.7743 1.4362 10 6 6.1149 3.0579 0.7903 11 8 5.8093 4.1377 0.3304 12 6 7.5251 2.8112 1.2611 13 7 8.3265 4.0207 1.0574 14 6 9.1127 4.2680 -0.0348 15 6 9.7097 5.4636 0.0923 16 6 10.6538 6.1033 -0.8928 17 8 11.9911 6.0161 -0.3967 18 14 10.5393 5.2175 -2.5278 19 6 9.2695 6.0284 1.3702 20 6 9.5372 7.2188 2.0485 21 6 8.9518 7.4553 3.2605 22 6 8.0934 6.5211 3.8231 23 6 7.8161 5.3392 3.1713 24 6 8.4006 5.0777 1.9366 25 6 3.3756 1.3718 -0.7046 26 1 -0.3634 0.5138 0.8900 27 1 -0.3634 0.5138 -0.8900 28 1 -0.3634 -1.0276 0.0005 29 1 3.1165 0.7740 1.8410 30 1 2.2140 2.3477 1.9411 31 1 5.3974 0.7787 2.5138 32 1 4.9504 -0.0025 0.9780 33 1 6.6145 0.5763 1.2307 34 1 7.9591 1.9884 0.6931 35 1 7.5150 2.5559 2.3206 36 1 9.2348 3.6003 -0.8747 37 1 10.3837 7.1506 -1.0274 38 1 12.2991 5.1108 -0.2529 39 1 11.4651 5.8393 -3.5083 40 1 10.8742 3.7815 -2.3521 41 1 10.2052 7.9498 1.6173 42 1 9.1596 8.3762 3.7851 43 1 7.6387 6.7222 4.7819 44 1 7.1432 4.6206 3.6153 45 1 3.3384 1.8469 -1.6848 46 1 3.9088 0.4212 -0.7137 There are 61 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 61 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_10122440_9818708.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:45:08 Heat of formation + Delta-G solvation = 1.983950 kcal Electronic energy + Delta-G solvation = -28541.089343 eV Core-core repulsion = 24592.884940 eV Total energy + Delta-G solvation = -3948.204403 eV No. of doubly occupied orbitals = 61 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 331.162 amu Computer time = 0.87 seconds Orbital eigenvalues (eV) -42.51301 -41.46159 -39.86578 -38.03335 -37.73779 -37.37904 -35.36590 -33.92675 -31.36260 -30.11836 -29.12868 -28.44591 -27.77413 -26.85757 -26.04876 -24.75421 -23.55613 -22.52111 -21.28930 -20.57695 -20.21047 -18.83912 -18.40281 -18.04664 -17.64720 -17.31094 -16.91578 -16.76696 -16.32445 -16.28234 -16.07166 -15.86096 -15.44163 -15.15351 -15.04056 -14.75314 -14.61813 -14.38053 -14.27629 -13.99518 -13.78647 -13.55864 -13.50891 -13.38062 -13.20146 -12.84323 -12.59206 -12.44813 -12.36310 -12.27002 -12.02464 -11.94452 -11.86644 -11.61962 -11.03944 -10.58548 -10.40696 -10.34325 -9.83837 -9.01638 -8.52334 -4.85572 0.28599 0.80244 1.34778 1.37542 1.39999 1.62832 1.70941 1.93579 2.03285 2.77439 3.07520 3.20275 3.36312 3.40083 3.46631 3.59617 3.66405 3.71758 3.73838 3.78385 3.86372 3.88194 4.06913 4.17694 4.21674 4.32276 4.34912 4.36909 4.38143 4.44198 4.56708 4.59069 4.60695 4.68796 4.73303 4.78611 4.81820 4.82210 4.91456 4.95083 5.00379 5.26425 5.31429 5.65564 5.81903 5.87460 5.90924 6.06049 6.13258 6.27976 6.36671 6.60492 6.93258 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.028 3.972 2 O -0.375 6.375 3 C 0.065 3.935 4 H 0.093 0.907 5 C -0.166 4.166 6 C 0.124 3.876 7 H 0.124 0.876 8 N -0.602 5.602 9 C 0.068 3.932 10 C 0.494 3.506 11 O -0.512 6.512 12 C 0.093 3.907 13 N -0.466 5.466 14 C 0.066 3.934 15 C -0.193 4.193 16 C -0.036 4.036 17 O -0.531 6.531 18 Si 0.682 3.318 19 C -0.086 4.086 20 C -0.065 4.065 21 C -0.146 4.146 22 C -0.096 4.096 23 C -0.128 4.128 24 C 0.109 3.891 25 C -0.149 4.149 26 H 0.043 0.957 27 H 0.044 0.956 28 H 0.087 0.913 29 H 0.097 0.903 30 H 0.077 0.923 31 H 0.063 0.937 32 H 0.082 0.918 33 H 0.074 0.926 34 H 0.121 0.879 35 H 0.117 0.883 36 H 0.168 0.832 37 H 0.114 0.886 38 H 0.372 0.628 39 H -0.256 1.256 40 H -0.260 1.260 41 H 0.123 0.877 42 H 0.123 0.877 43 H 0.125 0.875 44 H 0.114 0.886 45 H 0.080 0.920 46 H 0.096 0.904 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.788 -5.403 0.937 6.665 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.068 4.068 2 O -0.294 6.294 3 C 0.006 3.994 4 H 0.111 0.889 5 C -0.204 4.204 6 C 0.020 3.980 7 H 0.142 0.858 8 N -0.336 5.336 9 C -0.075 4.075 10 C 0.280 3.720 11 O -0.386 6.386 12 C -0.033 4.033 13 N -0.149 5.149 14 C -0.059 4.059 15 C -0.200 4.200 16 C -0.147 4.147 17 O -0.337 6.337 18 Si 0.583 3.417 19 C -0.090 4.090 20 C -0.083 4.083 21 C -0.165 4.165 22 C -0.116 4.116 23 C -0.148 4.148 24 C 0.005 3.995 25 C -0.187 4.187 26 H 0.062 0.938 27 H 0.062 0.938 28 H 0.106 0.894 29 H 0.116 0.884 30 H 0.096 0.904 31 H 0.082 0.918 32 H 0.101 0.899 33 H 0.092 0.908 34 H 0.139 0.861 35 H 0.135 0.865 36 H 0.185 0.815 37 H 0.132 0.868 38 H 0.220 0.780 39 H -0.180 1.180 40 H -0.185 1.185 41 H 0.141 0.859 42 H 0.141 0.859 43 H 0.143 0.857 44 H 0.132 0.868 45 H 0.099 0.901 46 H 0.114 0.886 Dipole moment (debyes) X Y Z Total from point charges -3.617 -5.084 0.060 6.240 hybrid contribution 0.360 -0.513 0.871 1.073 sum -3.257 -5.598 0.931 6.543 Atomic orbital electron populations 1.22836 0.80674 1.03104 1.00183 1.87934 1.20073 1.26801 1.94546 1.23441 0.93879 0.85866 0.96210 0.88921 1.23976 0.97062 1.01474 0.97907 1.22333 0.79804 1.00757 0.95110 0.85830 1.47754 1.09977 1.13214 1.62663 1.21921 1.01600 0.84666 0.99299 1.20998 0.87317 0.84452 0.79264 1.90797 1.80233 1.23877 1.43660 1.21652 0.89354 0.87513 1.04759 1.43252 1.39016 1.15525 1.17154 1.21575 0.95115 0.97979 0.91213 1.20575 1.05809 0.96033 0.97632 1.24276 0.81138 1.06261 1.03033 1.86606 1.28386 1.32203 1.86489 0.95017 0.90882 0.78394 0.77410 1.18936 0.99966 0.95083 0.95025 1.20308 0.98539 0.95197 0.94284 1.20670 0.99390 1.00054 0.96370 1.20823 0.98115 0.93053 0.99571 1.19953 1.02537 0.98997 0.93349 1.18169 1.00129 0.88279 0.92972 1.23713 0.95387 1.00724 0.98904 0.93845 0.93758 0.89426 0.88413 0.90414 0.91810 0.89902 0.90774 0.86084 0.86488 0.81492 0.86790 0.78040 1.18009 1.18526 0.85899 0.85923 0.85743 0.86805 0.90114 0.88588 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.04 10.85 101.05 1.10 1.05 16 2 O -0.38 -0.19 10.71 -35.23 -0.38 -0.57 16 3 C 0.06 -0.07 4.31 -25.92 -0.11 -0.19 16 4 H 0.09 -0.19 7.87 -51.93 -0.41 -0.60 16 5 C -0.17 0.28 7.34 -25.92 -0.19 0.09 16 6 C 0.12 -0.11 4.21 -67.12 -0.28 -0.39 16 7 H 0.12 0.09 7.23 -51.93 -0.38 -0.28 16 8 N -0.60 0.88 3.08 -173.00 -0.53 0.35 16 9 C 0.07 -0.31 8.84 59.85 0.53 0.22 16 10 C 0.49 0.33 7.74 -10.99 -0.09 0.25 16 11 O -0.51 -2.65 15.90 5.56 0.09 -2.56 16 12 C 0.09 -0.16 5.03 -5.19 -0.03 -0.18 16 13 N -0.47 -0.78 2.27 -115.71 -0.26 -1.04 16 14 C 0.07 0.09 9.89 -16.74 -0.17 -0.08 16 15 C -0.19 -0.51 5.58 -102.71 -0.57 -1.08 16 16 C -0.04 -0.06 3.06 36.01 0.11 0.05 16 17 O -0.53 -1.45 12.88 -35.23 -0.45 -1.90 16 18 Si 0.68 0.04 30.82 -169.99 -5.24 -5.20 16 19 C -0.09 -0.37 6.35 -105.14 -0.67 -1.04 16 20 C -0.06 -0.24 10.05 -39.65 -0.40 -0.64 16 21 C -0.15 -0.40 9.97 -39.95 -0.40 -0.80 16 22 C -0.10 -0.23 10.01 -39.54 -0.40 -0.62 16 23 C -0.13 -0.36 10.00 -39.43 -0.39 -0.75 16 24 C 0.11 0.40 6.80 -83.99 -0.57 -0.17 16 25 C -0.15 0.20 7.45 -25.91 -0.19 0.00 16 26 H 0.04 -0.09 8.14 -51.93 -0.42 -0.52 16 27 H 0.04 -0.10 8.14 -51.93 -0.42 -0.52 16 28 H 0.09 -0.20 8.14 -51.93 -0.42 -0.62 16 29 H 0.10 -0.18 6.72 -51.93 -0.35 -0.53 16 30 H 0.08 -0.14 8.14 -51.93 -0.42 -0.56 16 31 H 0.06 -0.33 8.14 -51.92 -0.42 -0.75 16 32 H 0.08 -0.37 6.34 -51.93 -0.33 -0.70 16 33 H 0.07 -0.47 6.44 -51.93 -0.33 -0.81 16 34 H 0.12 -0.58 7.38 -51.93 -0.38 -0.96 16 35 H 0.12 -0.42 8.11 -51.93 -0.42 -0.84 16 36 H 0.17 -0.22 6.27 -52.49 -0.33 -0.55 16 37 H 0.11 0.17 7.96 -51.93 -0.41 -0.24 16 38 H 0.37 -0.12 8.70 45.56 0.40 0.28 16 39 H -0.26 -0.81 7.11 56.52 0.40 -0.41 16 40 H -0.26 -0.24 7.00 56.52 0.40 0.15 16 41 H 0.12 0.34 8.06 -52.48 -0.42 -0.08 16 42 H 0.12 0.10 8.06 -52.48 -0.42 -0.33 16 43 H 0.12 0.02 8.06 -52.49 -0.42 -0.40 16 44 H 0.11 0.11 8.06 -52.49 -0.42 -0.31 16 45 H 0.08 -0.10 8.14 -51.93 -0.42 -0.52 16 46 H 0.10 -0.13 6.92 -51.93 -0.36 -0.49 16 LS Contribution 378.27 15.07 5.70 5.70 Total: 0.00 -9.58 378.27 -10.53 -20.11 By element: Atomic # 1 Polarization: -3.86 SS G_CDS: -6.74 Total: -10.60 kcal Atomic # 6 Polarization: -1.57 SS G_CDS: -2.72 Total: -4.29 kcal Atomic # 7 Polarization: 0.10 SS G_CDS: -0.80 Total: -0.69 kcal Atomic # 8 Polarization: -4.29 SS G_CDS: -0.74 Total: -5.03 kcal Atomic # 14 Polarization: 0.04 SS G_CDS: -5.24 Total: -5.20 kcal Total LS contribution 5.70 Total: 5.70 kcal Total: -9.58 -10.53 -20.11 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10122440_9818708.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 22.091 kcal (2) G-P(sol) polarization free energy of solvation -9.575 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 12.516 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.532 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.107 kcal (6) G-S(sol) free energy of system = (1) + (5) 1.984 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.87 seconds