Wall clock time and date at job start Tue Mar 9 2021 13:48:50 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50693 * 1 3 3 C 1.37792 * 119.85114 * 2 1 4 4 C 1.39703 * 119.91174 * 179.97438 * 3 2 1 5 5 C 1.47533 * 120.19092 * 179.97438 * 4 3 2 6 6 O 1.21588 * 120.00025 * 179.97438 * 5 4 3 7 7 N 1.34784 * 120.00117 * 359.97438 * 5 4 3 8 8 C 1.46493 * 119.99864 * 179.72963 * 7 5 4 9 9 H 1.09000 * 112.85483 * 334.66378 * 8 7 5 10 10 C 1.53777 * 113.61833 * 105.86275 * 8 7 5 11 11 C 1.54054 * 86.98542 * 89.15903 * 10 8 7 12 12 H 1.09000 * 113.68870 * 270.87285 * 11 10 8 13 13 C 1.50706 * 113.61760 * 139.98265 * 11 10 8 14 14 C 1.38219 * 119.96601 * 142.50665 * 13 11 10 15 15 C 1.38322 * 120.00651 * 180.02562 * 14 13 11 16 16 Cl 1.73602 * 120.02090 * 179.97438 * 15 14 13 17 17 C 1.38546 * 119.95401 * 359.97438 * 15 14 13 18 18 F 1.35099 * 120.03033 * 180.02562 * 17 15 14 19 19 C 1.38440 * 119.93897 * 359.97438 * 17 15 14 20 20 C 1.38206 * 119.98844 * 359.74899 * 19 17 15 21 21 C 1.53777 * 87.07820 * 25.43361 * 11 10 8 22 22 C 1.40140 * 119.61883 * 0.24982 * 4 3 2 23 23 O 1.35650 * 120.15097 * 179.72729 * 22 4 3 24 24 C 1.38713 * 119.69215 * 359.51498 * 22 4 3 25 25 C 1.50706 * 119.95057 * 180.24798 * 24 22 4 26 26 O 1.42902 * 109.46630 * 75.23943 * 25 24 22 27 27 Si 1.86299 * 109.46868 * 195.23576 * 25 24 22 28 28 C 1.38054 * 120.08806 * 0.49114 * 24 22 4 29 29 H 1.08998 * 109.46942 * 90.00512 * 1 2 3 30 30 H 1.09003 * 109.46933 * 210.00104 * 1 2 3 31 31 H 1.08995 * 109.47517 * 330.00052 * 1 2 3 32 32 H 1.08006 * 120.03785 * 0.02562 * 3 2 1 33 33 H 0.97000 * 119.99339 * 0.02562 * 7 5 4 34 34 H 1.09001 * 113.61733 * 203.66099 * 10 8 7 35 35 H 1.09003 * 113.61313 * 334.56504 * 10 8 7 36 36 H 1.08001 * 119.99321 * 359.97438 * 14 13 11 37 37 H 1.07998 * 120.01004 * 180.02562 * 19 17 15 38 38 H 1.07993 * 119.97789 * 180.27336 * 20 19 17 39 39 H 1.08998 * 113.61800 * 220.02412 * 21 11 10 40 40 H 1.08999 * 113.61311 * 89.11809 * 21 11 10 41 41 H 0.96695 * 114.00304 * 90.00181 * 23 22 4 42 42 H 1.08998 * 109.47598 * 315.24075 * 25 24 22 43 43 H 0.96700 * 113.99688 * 179.97438 * 26 25 24 44 44 H 1.48501 * 110.00099 * 178.68508 * 27 25 24 45 45 H 1.48497 * 110.00100 * 300.00440 * 27 25 24 46 46 H 1.08000 * 119.79906 * 179.76467 * 28 24 22 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5069 0.0000 0.0000 3 6 2.1928 1.1951 0.0000 4 6 3.5898 1.1966 0.0005 5 6 4.3304 2.4726 0.0000 6 8 5.5463 2.4698 0.0009 7 7 3.6591 3.6414 -0.0016 8 6 4.3945 4.9083 0.0038 9 1 5.3901 4.8181 0.4384 10 6 4.3773 5.6365 -1.3505 11 6 3.0840 6.3237 -0.8726 12 1 2.1778 5.7690 -1.1159 13 6 2.9984 7.7798 -1.2517 14 6 1.7847 8.3260 -1.6243 15 6 1.7053 9.6622 -1.9729 16 17 0.1811 10.3485 -2.4416 17 6 2.8429 10.4525 -1.9478 18 9 2.7671 11.7578 -2.2875 19 6 4.0574 9.9035 -1.5733 20 6 4.1329 8.5695 -1.2199 21 6 3.5832 6.0891 0.5628 22 6 4.2837 -0.0210 -0.0042 23 8 5.6402 -0.0321 -0.0093 24 6 3.5771 -1.2146 0.0008 25 6 4.3174 -2.5273 0.0013 26 8 4.8546 -2.7705 1.3030 27 14 3.1448 -3.9017 -0.4534 28 6 2.1966 -1.2016 0.0001 29 1 -0.3633 -0.0001 -1.0277 30 1 -0.3633 -0.8900 0.5139 31 1 -0.3634 0.8899 0.5138 32 1 1.6509 2.1294 0.0004 33 1 2.6891 3.6435 -0.0020 34 1 5.2121 6.3239 -1.4873 35 1 4.2313 4.9716 -2.2019 36 1 0.8983 7.7092 -1.6440 37 1 4.9449 10.5185 -1.5529 38 1 5.0795 8.1425 -0.9235 39 1 2.7965 5.7894 1.2552 40 1 4.2012 6.9001 0.9481 41 1 6.0368 -0.0369 0.8725 42 1 5.1291 -2.4870 -0.7250 43 1 5.3450 -3.6006 1.3773 44 1 3.8696 -5.1973 -0.4873 45 1 2.0334 -3.9671 0.5294 46 1 1.6511 -2.1337 0.0002 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_10156534_13422088.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:48:50 Heat of formation + Delta-G solvation = -74.320073 kcal Electronic energy + Delta-G solvation = -32868.387249 eV Core-core repulsion = 28052.131536 eV Total energy + Delta-G solvation = -4816.255713 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 392.102 amu Computer time = 1.33 seconds Orbital eigenvalues (eV) -50.04433 -41.91455 -41.18724 -39.99645 -38.75870 -38.03628 -37.71782 -37.51399 -34.69996 -33.17881 -32.75891 -32.11548 -31.19136 -27.54039 -26.78829 -26.67900 -26.43594 -24.95551 -24.23125 -22.77963 -21.82572 -21.61150 -20.28350 -19.45209 -18.98022 -18.63440 -18.33884 -17.71248 -17.61198 -17.19510 -16.85465 -16.73824 -16.56022 -16.04140 -16.00647 -15.76241 -15.41587 -15.33801 -15.04121 -14.91046 -14.63966 -14.47065 -14.37873 -14.27958 -14.08485 -13.77129 -13.74749 -13.52609 -13.40338 -13.19057 -12.96419 -12.59136 -12.52985 -12.48055 -12.41784 -12.34170 -11.88068 -11.81498 -11.72898 -11.62599 -11.25734 -10.92521 -10.48955 -10.24575 -10.04377 -9.98516 -9.58267 -9.48984 -4.95849 -0.33829 -0.13455 0.02982 0.07551 0.94147 1.24134 1.55748 1.70953 1.87532 2.03636 2.32705 2.53399 3.03934 3.18299 3.28975 3.43764 3.51519 3.56099 3.67012 3.70173 3.72761 3.83058 3.94075 4.04915 4.10593 4.12316 4.16788 4.19325 4.33496 4.52556 4.54759 4.61518 4.65656 4.78994 4.81058 4.84459 4.86176 4.87522 4.91884 4.95829 4.99666 5.04785 5.10454 5.15662 5.21343 5.25027 5.38820 5.42974 5.62200 5.65439 5.68337 6.47600 6.52028 6.68467 7.17853 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.117 4.117 2 C -0.094 4.094 3 C -0.060 4.060 4 C -0.179 4.179 5 C 0.560 3.440 6 O -0.562 6.562 7 N -0.696 5.696 8 C 0.114 3.886 9 H 0.086 0.914 10 C -0.143 4.143 11 C -0.063 4.063 12 H 0.119 0.881 13 C -0.063 4.063 14 C -0.079 4.079 15 C -0.086 4.086 16 Cl -0.062 7.062 17 C 0.077 3.923 18 F -0.143 7.143 19 C -0.139 4.139 20 C -0.080 4.080 21 C -0.123 4.123 22 C 0.161 3.839 23 O -0.491 6.491 24 C -0.118 4.118 25 C -0.087 4.087 26 O -0.556 6.556 27 Si 0.773 3.227 28 C -0.082 4.082 29 H 0.090 0.910 30 H 0.072 0.928 31 H 0.085 0.915 32 H 0.165 0.835 33 H 0.414 0.586 34 H 0.103 0.897 35 H 0.067 0.933 36 H 0.160 0.840 37 H 0.159 0.841 38 H 0.163 0.837 39 H 0.091 0.909 40 H 0.107 0.893 41 H 0.401 0.599 42 H 0.079 0.921 43 H 0.395 0.605 44 H -0.287 1.287 45 H -0.279 1.279 46 H 0.148 0.852 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.794 -3.276 0.514 5.829 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.173 4.173 2 C -0.094 4.094 3 C -0.078 4.078 4 C -0.183 4.183 5 C 0.348 3.652 6 O -0.441 6.441 7 N -0.348 5.348 8 C 0.008 3.992 9 H 0.104 0.896 10 C -0.182 4.182 11 C -0.081 4.081 12 H 0.137 0.863 13 C -0.064 4.064 14 C -0.098 4.098 15 C -0.114 4.114 16 Cl -0.033 7.033 17 C 0.058 3.942 18 F -0.122 7.122 19 C -0.158 4.158 20 C -0.098 4.098 21 C -0.161 4.161 22 C 0.115 3.885 23 O -0.302 6.302 24 C -0.119 4.119 25 C -0.195 4.195 26 O -0.366 6.366 27 Si 0.676 3.324 28 C -0.099 4.099 29 H 0.109 0.891 30 H 0.091 0.909 31 H 0.104 0.896 32 H 0.182 0.818 33 H 0.253 0.747 34 H 0.121 0.879 35 H 0.086 0.914 36 H 0.178 0.822 37 H 0.177 0.823 38 H 0.180 0.820 39 H 0.110 0.890 40 H 0.125 0.875 41 H 0.260 0.740 42 H 0.097 0.903 43 H 0.245 0.755 44 H -0.214 1.214 45 H -0.206 1.206 46 H 0.165 0.835 Dipole moment (debyes) X Y Z Total from point charges -4.769 -3.307 0.226 5.807 hybrid contribution 0.846 0.193 1.052 1.364 sum -3.923 -3.114 1.278 5.169 Atomic orbital electron populations 1.20917 0.87938 1.04329 1.04127 1.20111 0.98163 0.91680 0.99491 1.21440 0.90948 0.99825 0.95586 1.20399 0.95065 0.92530 1.10268 1.18235 0.86855 0.84268 0.75810 1.90809 1.14966 1.87857 1.50480 1.45447 1.10680 1.04140 1.74564 1.21879 0.96827 0.82614 0.97869 0.89592 1.23643 0.98047 0.99184 0.97288 1.21684 0.99636 0.90022 0.96782 0.86259 1.19879 0.91971 0.96449 0.98053 1.21114 0.99888 0.91445 0.97330 1.21222 0.86782 0.95511 1.07859 1.98401 1.29196 1.85082 1.90657 1.17824 0.94609 0.78546 1.03269 1.91513 1.97065 1.33577 1.90019 1.21402 0.96099 0.97330 1.00962 1.21307 1.00039 0.91794 0.96663 1.23410 1.00134 0.96811 0.95739 1.18521 0.83637 0.90833 0.95524 1.84640 1.15280 1.96076 1.34252 1.19736 0.94127 0.93502 1.04531 1.25011 1.04478 1.02116 0.87872 1.86500 1.74086 1.45869 1.30160 0.93928 0.77305 0.73483 0.87664 1.21360 0.92263 0.99767 0.96545 0.89134 0.90865 0.89593 0.81801 0.74743 0.87909 0.91398 0.82241 0.82318 0.81988 0.88995 0.87481 0.74018 0.90295 0.75485 1.21375 1.20617 0.83475 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 1.11 10.00 71.23 0.71 1.82 16 2 C -0.09 0.38 5.87 -19.90 -0.12 0.26 16 3 C -0.06 0.24 9.18 22.52 0.21 0.45 16 4 C -0.18 -0.54 5.89 -20.01 -0.12 -0.66 16 5 C 0.56 2.78 7.76 86.69 0.67 3.45 16 6 O -0.56 -7.66 14.78 16.93 0.25 -7.41 16 7 N -0.70 2.41 5.21 -443.20 -2.31 0.10 16 8 C 0.11 -0.47 4.29 45.52 0.20 -0.27 16 9 H 0.09 0.06 7.50 -2.39 -0.02 0.05 16 10 C -0.14 0.83 7.27 31.21 0.23 1.06 16 11 C -0.06 0.57 3.87 -10.92 -0.04 0.53 16 12 H 0.12 -1.44 8.09 -2.39 -0.02 -1.46 16 13 C -0.06 0.36 5.29 -19.86 -0.11 0.25 16 14 C -0.08 0.25 9.49 22.29 0.21 0.46 16 15 C -0.09 -0.18 6.33 22.36 0.14 -0.04 16 16 Cl -0.06 -0.25 28.62 -2.72 -0.08 -0.33 16 17 C 0.08 0.26 7.28 22.39 0.16 0.42 16 18 F -0.14 -1.06 16.84 44.97 0.76 -0.31 16 19 C -0.14 0.26 10.03 22.31 0.22 0.48 16 20 C -0.08 0.44 8.59 22.27 0.19 0.63 16 21 C -0.12 1.14 7.29 31.12 0.23 1.36 16 22 C 0.16 1.03 6.69 22.85 0.15 1.19 16 23 O -0.49 -4.56 10.90 -68.73 -0.75 -5.31 16 24 C -0.12 -0.38 5.30 -19.79 -0.10 -0.48 16 25 C -0.09 -0.11 2.37 71.24 0.17 0.06 16 26 O -0.56 -1.51 12.86 -148.98 -1.92 -3.42 16 27 Si 0.77 -2.02 30.19 68.60 2.07 0.05 16 28 C -0.08 0.08 8.30 22.30 0.19 0.26 16 29 H 0.09 -1.03 8.14 -2.39 -0.02 -1.05 16 30 H 0.07 -0.68 8.08 -2.39 -0.02 -0.70 16 31 H 0.09 -1.03 8.08 -2.39 -0.02 -1.05 16 32 H 0.16 -1.93 6.40 -2.91 -0.02 -1.95 16 33 H 0.41 -4.17 6.73 -92.71 -0.62 -4.79 16 34 H 0.10 -0.71 6.33 -2.39 -0.02 -0.73 16 35 H 0.07 -0.20 8.14 -2.39 -0.02 -0.22 16 36 H 0.16 -1.14 8.05 -2.91 -0.02 -1.17 16 37 H 0.16 -0.81 8.06 -2.91 -0.02 -0.84 16 38 H 0.16 -1.61 6.68 -2.91 -0.02 -1.63 16 39 H 0.09 -1.00 8.14 -2.39 -0.02 -1.02 16 40 H 0.11 -1.06 7.71 -2.39 -0.02 -1.07 16 41 H 0.40 2.08 9.06 -74.06 -0.67 1.41 16 42 H 0.08 0.09 7.82 -2.39 -0.02 0.07 16 43 H 0.39 -1.92 8.74 -74.06 -0.65 -2.57 16 44 H -0.29 -0.55 7.11 99.48 0.71 0.16 16 45 H -0.28 -0.45 6.74 99.48 0.67 0.22 16 46 H 0.15 -0.59 4.87 -2.91 -0.01 -0.60 16 Total: 0.00 -24.69 400.98 0.37 -24.33 By element: Atomic # 1 Polarization: -18.09 SS G_CDS: -0.85 Total: -18.94 kcal Atomic # 6 Polarization: 8.04 SS G_CDS: 3.19 Total: 11.23 kcal Atomic # 7 Polarization: 2.41 SS G_CDS: -2.31 Total: 0.10 kcal Atomic # 8 Polarization: -13.72 SS G_CDS: -2.41 Total: -16.13 kcal Atomic # 9 Polarization: -1.06 SS G_CDS: 0.76 Total: -0.31 kcal Atomic # 14 Polarization: -2.02 SS G_CDS: 2.07 Total: 0.05 kcal Atomic # 17 Polarization: -0.25 SS G_CDS: -0.08 Total: -0.33 kcal Total: -24.69 0.37 -24.33 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10156534_13422088.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -49.994 kcal (2) G-P(sol) polarization free energy of solvation -24.693 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -74.687 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.367 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.326 kcal (6) G-S(sol) free energy of system = (1) + (5) -74.320 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.33 seconds