Wall clock time and date at job start Tue Mar 9 2021 13:49:33 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42896 * 1 3 3 Si 1.86308 * 109.47370 * 2 1 4 4 C 1.50702 * 109.47252 * 120.00059 * 2 1 3 5 5 C 1.38237 * 119.97414 * 245.02188 * 4 2 1 6 6 C 1.38289 * 120.11494 * 179.72543 * 5 4 2 7 7 C 1.38125 * 120.05202 * 0.50894 * 6 5 4 8 8 C 1.38755 * 119.93999 * 359.48967 * 7 6 5 9 9 O 1.35906 * 120.05296 * 180.27973 * 8 7 6 10 10 C 1.42901 * 117.00155 * 359.97438 * 9 8 7 11 11 C 1.52991 * 109.47372 * 180.02562 * 10 9 8 12 12 C 1.50707 * 109.47416 * 180.02562 * 11 10 9 13 13 O 1.21282 * 119.99659 * 0.02562 * 12 11 10 14 14 N 1.34778 * 120.00105 * 180.02562 * 12 11 10 15 15 C 1.46494 * 119.99831 * 180.02562 * 14 12 11 16 16 H 1.09000 * 112.85531 * 23.79680 * 15 14 12 17 17 C 1.53779 * 113.61571 * 155.00031 * 15 14 12 18 18 C 1.53782 * 87.08278 * 89.11425 * 17 15 14 19 19 H 1.09004 * 113.60925 * 270.79801 * 18 17 15 20 20 C 1.50698 * 113.61397 * 139.98333 * 18 17 15 21 21 C 1.38217 * 119.96814 * 120.00178 * 20 18 17 22 22 C 1.38319 * 120.01067 * 179.97438 * 21 20 18 23 23 Cl 1.73607 * 120.02308 * 179.97438 * 22 21 20 24 24 C 1.38552 * 119.95061 * 0.02562 * 22 21 20 25 25 F 1.35102 * 120.02459 * 179.97438 * 24 22 21 26 26 C 1.38435 * 119.93914 * 0.02562 * 24 22 21 27 27 C 1.38195 * 119.98867 * 359.70102 * 26 24 22 28 28 C 1.53777 * 87.08323 * 25.43208 * 18 17 15 29 29 C 1.38167 * 119.96727 * 65.00196 * 4 2 1 30 30 H 0.96701 * 113.99925 * 299.99936 * 1 2 3 31 31 H 1.09001 * 109.47306 * 240.00516 * 2 1 3 32 32 H 1.48491 * 109.99957 * 300.00303 * 3 2 1 33 33 H 1.48501 * 109.99457 * 61.31769 * 3 2 1 34 34 H 1.08001 * 119.94627 * 359.97438 * 5 4 2 35 35 H 1.07995 * 119.98087 * 180.27524 * 6 5 4 36 36 H 1.08002 * 120.03152 * 179.77429 * 7 6 5 37 37 H 1.09003 * 109.47208 * 300.00726 * 10 9 8 38 38 H 1.09006 * 109.47043 * 60.00389 * 10 9 8 39 39 H 1.09003 * 109.47447 * 300.00457 * 11 10 9 40 40 H 1.09003 * 109.47081 * 60.00580 * 11 10 9 41 41 H 0.97001 * 119.99730 * 359.97438 * 14 12 11 42 42 H 1.09007 * 113.61105 * 203.65968 * 17 15 14 43 43 H 1.09003 * 113.61174 * 334.55906 * 17 15 14 44 44 H 1.08000 * 119.99610 * 359.97438 * 21 20 18 45 45 H 1.08003 * 120.00790 * 180.02562 * 26 24 22 46 46 H 1.08006 * 119.97747 * 180.29426 * 27 26 24 47 47 H 1.08997 * 113.61787 * 220.02456 * 28 18 17 48 48 H 1.09003 * 113.61363 * 89.11735 * 28 18 17 49 49 H 1.07992 * 120.03345 * 0.04168 * 29 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7565 0.0000 4 6 1.9313 -0.7104 1.2305 5 6 2.6383 -0.0117 2.1911 6 6 3.0957 -0.6594 3.3241 7 6 2.8562 -2.0092 3.4934 8 6 2.1468 -2.7127 2.5306 9 8 1.9049 -4.0396 2.6976 10 6 2.4108 -4.6465 3.8883 11 6 2.0436 -6.1317 3.8994 12 6 2.5766 -6.7716 5.1554 13 8 3.1895 -6.1052 5.9624 14 7 2.3722 -8.0844 5.3819 15 6 2.8899 -8.7063 6.6031 16 1 3.0413 -7.9906 7.4112 17 6 2.1143 -9.9634 7.0308 18 6 3.0836 -10.7663 6.1473 19 1 2.7505 -10.8680 5.1144 20 6 3.5106 -12.0770 6.7562 21 6 3.2397 -13.2635 6.1010 22 6 3.6316 -14.4669 6.6589 23 17 3.2909 -15.9575 5.8365 24 6 4.2954 -14.4821 7.8749 25 9 4.6785 -15.6568 8.4214 26 6 4.5648 -13.2926 8.5299 27 6 4.1770 -12.0913 7.9675 28 6 4.0962 -9.6289 6.3608 29 6 1.6845 -2.0596 1.3976 30 1 -0.3933 0.4417 0.7651 31 1 1.7923 -0.5137 -0.8900 32 1 1.5615 2.4679 -1.2084 33 1 1.5879 2.4585 1.2243 34 1 2.8303 1.0428 2.0586 35 1 3.6440 -0.1105 4.0753 36 1 3.2168 -2.5155 4.3766 37 1 3.4953 -4.5405 3.9176 38 1 1.9743 -4.1574 4.7591 39 1 0.9591 -6.2381 3.8699 40 1 2.4805 -6.6206 3.0286 41 1 1.8817 -8.6173 4.7366 42 1 2.2022 -10.1902 8.0934 43 1 1.0835 -9.9818 6.6768 44 1 2.7218 -13.2509 5.1533 45 1 5.0825 -13.3031 9.4777 46 1 4.3915 -11.1630 8.4764 47 1 4.6655 -9.3773 5.4660 48 1 4.7259 -9.7643 7.2402 49 1 1.1325 -2.6051 0.6467 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_10156534_4549614.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:49:33 Heat of formation + Delta-G solvation = -72.819168 kcal Electronic energy + Delta-G solvation = -33151.713688 eV Core-core repulsion = 28179.985441 eV Total energy + Delta-G solvation = -4971.728248 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 406.118 amu Computer time = 1.48 seconds Orbital eigenvalues (eV) -50.05576 -41.69206 -41.27993 -40.44836 -39.24307 -38.80309 -37.55891 -37.37365 -34.59296 -33.23835 -32.48817 -32.15427 -31.39355 -30.70764 -27.12589 -26.67580 -26.40992 -25.14440 -24.26370 -23.68827 -22.81851 -22.16751 -21.48055 -20.22214 -19.40448 -18.97590 -18.27846 -17.84297 -17.68685 -17.47806 -17.21726 -17.03471 -17.01163 -16.86693 -16.68890 -16.25149 -16.02507 -15.81004 -15.58562 -15.30947 -14.94683 -14.86273 -14.62222 -14.51213 -14.42178 -14.28407 -14.12682 -14.05110 -13.75575 -13.50870 -13.40284 -13.21740 -12.94507 -12.85840 -12.59052 -12.49317 -12.40577 -12.34058 -11.95866 -11.82594 -11.80662 -11.62434 -11.56123 -11.26922 -11.05636 -10.65076 -10.10407 -10.05072 -9.95304 -9.59274 -9.27396 -4.89647 -0.14699 0.01645 0.19783 0.39326 0.92821 1.30128 1.51777 1.62248 1.70646 1.97079 2.31658 2.48907 2.65721 3.02757 3.42147 3.44636 3.51386 3.56522 3.64798 3.68857 3.70501 3.84760 3.89768 3.94030 3.98984 4.04450 4.09913 4.11399 4.16972 4.23454 4.28626 4.40309 4.53550 4.55053 4.63042 4.67024 4.68844 4.77839 4.79164 4.82300 4.85465 4.87787 4.96699 4.98174 5.04456 5.09876 5.17360 5.26039 5.38047 5.38232 5.44137 5.62466 5.64555 5.70441 6.33281 6.47513 6.47586 7.17265 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.548 6.548 2 C -0.086 4.086 3 Si 0.775 3.225 4 C -0.081 4.081 5 C -0.159 4.159 6 C -0.076 4.076 7 C -0.210 4.210 8 C 0.117 3.883 9 O -0.324 6.324 10 C 0.073 3.927 11 C -0.134 4.134 12 C 0.524 3.476 13 O -0.581 6.581 14 N -0.698 5.698 15 C 0.113 3.887 16 H 0.088 0.912 17 C -0.126 4.126 18 C -0.065 4.065 19 H 0.118 0.882 20 C -0.063 4.063 21 C -0.081 4.081 22 C -0.086 4.086 23 Cl -0.063 7.063 24 C 0.077 3.923 25 F -0.143 7.143 26 C -0.139 4.139 27 C -0.080 4.080 28 C -0.142 4.142 29 C -0.141 4.141 30 H 0.386 0.614 31 H 0.125 0.875 32 H -0.302 1.302 33 H -0.280 1.280 34 H 0.146 0.854 35 H 0.152 0.848 36 H 0.137 0.863 37 H 0.066 0.934 38 H 0.064 0.936 39 H 0.126 0.874 40 H 0.127 0.873 41 H 0.419 0.581 42 H 0.105 0.895 43 H 0.089 0.911 44 H 0.158 0.842 45 H 0.160 0.840 46 H 0.164 0.836 47 H 0.071 0.929 48 H 0.102 0.898 49 H 0.128 0.872 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.687 1.696 0.356 1.864 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.356 6.356 2 C -0.195 4.195 3 Si 0.680 3.320 4 C -0.081 4.081 5 C -0.176 4.176 6 C -0.094 4.094 7 C -0.229 4.229 8 C 0.072 3.928 9 O -0.239 6.239 10 C -0.002 4.002 11 C -0.173 4.173 12 C 0.311 3.689 13 O -0.461 6.461 14 N -0.350 5.350 15 C 0.008 3.992 16 H 0.106 0.894 17 C -0.163 4.163 18 C -0.084 4.084 19 H 0.136 0.864 20 C -0.064 4.064 21 C -0.100 4.100 22 C -0.114 4.114 23 Cl -0.034 7.034 24 C 0.057 3.943 25 F -0.122 7.122 26 C -0.157 4.157 27 C -0.098 4.098 28 C -0.181 4.181 29 C -0.160 4.160 30 H 0.235 0.765 31 H 0.143 0.857 32 H -0.231 1.231 33 H -0.207 1.207 34 H 0.163 0.837 35 H 0.170 0.830 36 H 0.155 0.845 37 H 0.084 0.916 38 H 0.082 0.918 39 H 0.144 0.856 40 H 0.145 0.855 41 H 0.257 0.743 42 H 0.123 0.877 43 H 0.108 0.892 44 H 0.176 0.824 45 H 0.177 0.823 46 H 0.182 0.818 47 H 0.089 0.911 48 H 0.120 0.880 49 H 0.146 0.854 Dipole moment (debyes) X Y Z Total from point charges 0.872 2.331 0.210 2.497 hybrid contribution -1.101 -1.257 0.518 1.750 sum -0.229 1.074 0.728 1.317 Atomic orbital electron populations 1.86576 1.18445 1.80477 1.50124 1.25332 0.83505 1.12243 0.98384 0.93875 0.90294 0.71461 0.76374 1.20144 0.97932 0.93299 0.96773 1.21203 1.00934 1.00774 0.94724 1.21240 0.97255 0.93444 0.97421 1.21556 1.04183 0.96497 1.00631 1.19137 0.95724 0.82987 0.94938 1.85954 1.74662 1.20302 1.42943 1.22452 0.99254 0.93101 0.85401 1.21443 1.05419 0.93455 0.97003 1.20575 0.78592 0.82356 0.87370 1.90742 1.42893 1.63580 1.48913 1.45534 1.57153 1.08943 1.23406 1.21866 0.95455 0.94341 0.87580 0.89356 1.23415 0.99217 0.92391 1.01317 1.21653 0.97381 0.88790 1.00527 0.86384 1.19903 0.97384 0.94478 0.94618 1.21115 0.98900 0.88917 1.01028 1.21230 1.05608 0.89724 0.94826 1.98402 1.93900 1.33114 1.78019 1.17837 1.01024 0.82499 0.92963 1.91514 1.89238 1.46147 1.85292 1.21409 1.02227 0.90156 1.01943 1.21317 0.95505 0.98201 0.94747 1.23592 0.96566 0.94382 1.03531 1.20338 1.03917 0.94336 0.97366 0.76453 0.85717 1.23086 1.20655 0.83667 0.83049 0.84502 0.91552 0.91773 0.85643 0.85499 0.74337 0.87703 0.89231 0.82425 0.82259 0.81824 0.91063 0.87955 0.85388 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -1.84 12.83 -148.98 -1.91 -3.75 16 2 C -0.09 -0.01 2.80 71.24 0.20 0.19 16 3 Si 0.77 -1.63 29.88 68.60 2.05 0.42 16 4 C -0.08 -0.12 5.35 -19.88 -0.11 -0.22 16 5 C -0.16 0.09 8.67 22.28 0.19 0.28 16 6 C -0.08 0.02 10.04 22.25 0.22 0.25 16 7 C -0.21 -0.47 9.04 22.37 0.20 -0.27 16 8 C 0.12 0.52 6.69 22.51 0.15 0.67 16 9 O -0.32 -1.11 10.14 -92.49 -0.94 -2.05 16 10 C 0.07 -0.01 4.03 71.98 0.29 0.28 16 11 C -0.13 0.79 6.07 29.85 0.18 0.97 16 12 C 0.52 -1.09 7.83 87.66 0.69 -0.41 16 13 O -0.58 -4.11 15.58 -3.04 -0.05 -4.15 16 14 N -0.70 5.48 5.26 -440.03 -2.32 3.17 16 15 C 0.11 -0.79 4.32 45.52 0.20 -0.59 16 16 H 0.09 -0.20 7.46 -2.39 -0.02 -0.22 16 17 C -0.13 1.32 7.29 31.12 0.23 1.55 16 18 C -0.07 0.67 3.86 -11.02 -0.04 0.63 16 19 H 0.12 -1.52 8.09 -2.39 -0.02 -1.54 16 20 C -0.06 0.40 5.29 -19.86 -0.11 0.30 16 21 C -0.08 0.27 9.49 22.28 0.21 0.48 16 22 C -0.09 -0.17 6.33 22.36 0.14 -0.03 16 23 Cl -0.06 -0.26 28.62 -2.72 -0.08 -0.34 16 24 C 0.08 0.23 7.28 22.39 0.16 0.39 16 25 F -0.14 -1.03 16.84 44.97 0.76 -0.28 16 26 C -0.14 0.34 10.03 22.31 0.22 0.57 16 27 C -0.08 0.50 8.62 22.27 0.19 0.70 16 28 C -0.14 1.17 7.25 31.12 0.23 1.39 16 29 C -0.14 -0.59 9.62 22.37 0.22 -0.37 16 30 H 0.39 -0.89 8.70 -74.06 -0.64 -1.53 16 31 H 0.13 -0.17 7.96 -2.39 -0.02 -0.19 16 32 H -0.30 -1.68 7.11 99.48 0.71 -0.97 16 33 H -0.28 -0.34 7.01 99.48 0.70 0.36 16 34 H 0.15 -0.67 4.84 -2.91 -0.01 -0.68 16 35 H 0.15 -0.77 8.06 -2.91 -0.02 -0.80 16 36 H 0.14 0.08 6.30 -2.91 -0.02 0.06 16 37 H 0.07 0.07 7.62 -2.39 -0.02 0.05 16 38 H 0.06 0.08 7.62 -2.38 -0.02 0.06 16 39 H 0.13 -1.16 8.14 -2.39 -0.02 -1.18 16 40 H 0.13 -1.21 8.14 -2.39 -0.02 -1.23 16 41 H 0.42 -5.80 8.70 -92.71 -0.81 -6.61 16 42 H 0.10 -1.14 7.73 -2.38 -0.02 -1.15 16 43 H 0.09 -1.04 8.14 -2.39 -0.02 -1.06 16 44 H 0.16 -1.10 8.05 -2.91 -0.02 -1.13 16 45 H 0.16 -0.93 8.06 -2.91 -0.02 -0.95 16 46 H 0.16 -1.83 6.64 -2.91 -0.02 -1.85 16 47 H 0.07 -0.44 8.14 -2.39 -0.02 -0.46 16 48 H 0.10 -0.93 6.30 -2.39 -0.02 -0.95 16 49 H 0.13 0.57 8.06 -2.91 -0.02 0.54 16 Total: 0.00 -22.42 425.90 0.79 -21.63 By element: Atomic # 1 Polarization: -21.01 SS G_CDS: -0.40 Total: -21.41 kcal Atomic # 6 Polarization: 3.09 SS G_CDS: 3.67 Total: 6.76 kcal Atomic # 7 Polarization: 5.48 SS G_CDS: -2.32 Total: 3.17 kcal Atomic # 8 Polarization: -7.06 SS G_CDS: -2.90 Total: -9.95 kcal Atomic # 9 Polarization: -1.03 SS G_CDS: 0.76 Total: -0.28 kcal Atomic # 14 Polarization: -1.63 SS G_CDS: 2.05 Total: 0.42 kcal Atomic # 17 Polarization: -0.26 SS G_CDS: -0.08 Total: -0.34 kcal Total: -22.42 0.79 -21.63 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10156534_4549614.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -51.185 kcal (2) G-P(sol) polarization free energy of solvation -22.424 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -73.609 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.789 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.634 kcal (6) G-S(sol) free energy of system = (1) + (5) -72.819 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.48 seconds