Wall clock time and date at job start Tue Mar 9 2021 13:50:20 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42902 * 1 3 3 C 1.35977 * 117.00643 * 2 1 4 4 C 1.38671 * 120.00276 * 180.02562 * 3 2 1 5 5 C 1.38151 * 120.00237 * 180.02562 * 4 3 2 6 6 C 1.50703 * 120.00239 * 180.02562 * 5 4 3 7 7 O 1.42894 * 109.47052 * 104.98012 * 6 5 4 8 8 Si 1.86296 * 109.47002 * 344.97861 * 6 5 4 9 9 C 1.38681 * 119.99769 * 0.02562 * 5 4 3 10 10 O 1.35982 * 119.99865 * 180.02562 * 9 5 4 11 11 C 1.42904 * 116.99888 * 179.97438 * 10 9 5 12 12 C 1.50703 * 109.46869 * 179.97438 * 11 10 9 13 13 O 1.21280 * 120.00323 * 0.02562 * 12 11 10 14 14 N 1.34778 * 119.99817 * 179.97438 * 12 11 10 15 15 C 1.46499 * 119.99940 * 180.02562 * 14 12 11 16 16 H 1.09004 * 112.91032 * 23.75105 * 15 14 12 17 17 C 1.53784 * 113.61434 * 155.00095 * 15 14 12 18 18 C 1.53787 * 87.07923 * 89.11404 * 17 15 14 19 19 H 1.08998 * 113.61447 * 270.79825 * 18 17 15 20 20 C 1.50702 * 113.60869 * 139.98154 * 18 17 15 21 21 C 1.38213 * 119.96537 * 120.00363 * 20 18 17 22 22 C 1.38327 * 120.01160 * 180.02562 * 21 20 18 23 23 Cl 1.73597 * 120.02786 * 179.97438 * 22 21 20 24 24 C 1.38550 * 119.94932 * 359.97438 * 22 21 20 25 25 F 1.35099 * 120.02886 * 180.02562 * 24 22 21 26 26 C 1.38447 * 119.93947 * 359.97438 * 24 22 21 27 27 C 1.38192 * 119.98545 * 359.75489 * 26 24 22 28 28 C 1.53779 * 113.61357 * 252.49697 * 15 14 12 29 29 C 1.38712 * 120.00247 * 0.26787 * 9 5 4 30 30 C 1.38118 * 119.99684 * 359.45572 * 29 9 5 31 31 H 1.09000 * 109.46783 * 59.99278 * 1 2 3 32 32 H 1.08994 * 109.47880 * 180.02562 * 1 2 3 33 33 H 1.09006 * 109.46678 * 299.99870 * 1 2 3 34 34 H 1.08001 * 120.00156 * 0.04238 * 4 3 2 35 35 H 1.09001 * 109.46913 * 224.98017 * 6 5 4 36 36 H 0.96701 * 114.00319 * 60.00246 * 7 6 5 37 37 H 1.48506 * 110.00110 * 178.67909 * 8 6 5 38 38 H 1.48497 * 110.00425 * 299.99911 * 8 6 5 39 39 H 1.08994 * 109.46996 * 60.00007 * 11 10 9 40 40 H 1.08990 * 109.47179 * 299.99817 * 11 10 9 41 41 H 0.97000 * 119.99785 * 0.02562 * 14 12 11 42 42 H 1.09004 * 113.61451 * 334.56890 * 17 15 14 43 43 H 1.08994 * 113.61477 * 203.66192 * 17 15 14 44 44 H 1.07996 * 120.00000 * 359.97438 * 21 20 18 45 45 H 1.07994 * 120.00537 * 179.97438 * 26 24 22 46 46 H 1.07998 * 119.97974 * 180.24835 * 27 26 24 47 47 H 1.09006 * 113.61307 * 156.33848 * 28 15 14 48 48 H 1.08999 * 113.69146 * 25.44334 * 28 15 14 49 49 H 1.07995 * 120.00513 * 179.70153 * 29 9 5 50 50 H 1.08001 * 120.00107 * 180.25515 * 30 29 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0465 1.2115 0.0000 4 6 3.4313 1.2840 -0.0005 5 6 4.0586 2.5148 0.0000 6 6 5.5636 2.5936 -0.0012 7 8 6.0200 2.9674 -1.3027 8 14 6.2727 0.9316 0.4521 9 6 3.3034 3.6780 0.0016 10 8 3.9208 4.8895 0.0016 11 6 3.0809 6.0457 0.0027 12 6 3.9353 7.2872 0.0032 13 8 5.1443 7.1913 0.0021 14 7 3.3558 8.5040 0.0038 15 6 4.1863 9.7108 0.0036 16 1 5.1837 9.5395 -0.4013 17 6 3.4832 10.9424 -0.5912 18 6 2.9656 11.2342 0.8272 19 1 2.0133 10.7539 1.0519 20 6 2.9822 12.6977 1.1866 21 6 1.8046 13.3402 1.5192 22 6 1.8186 14.6836 1.8487 23 17 0.3397 15.4912 2.2660 24 6 3.0140 15.3841 1.8454 25 9 3.0297 16.6961 2.1675 26 6 4.1925 14.7382 1.5129 27 6 4.1763 13.3947 1.1896 28 6 4.1870 10.4582 1.3476 29 6 1.9182 3.6055 0.0083 30 6 1.2910 2.3750 0.0020 31 1 -0.3633 0.5140 -0.8899 32 1 -0.3634 -1.0276 0.0005 33 1 -0.3633 0.5139 0.8901 34 1 4.0195 0.3782 -0.0016 35 1 5.8890 3.3379 0.7256 36 1 5.6892 3.8245 -1.6044 37 1 7.7565 0.9875 0.4234 38 1 5.8056 0.5315 1.8037 39 1 2.4524 6.0373 0.8932 40 1 2.4510 6.0380 -0.8867 41 1 2.3888 8.5806 0.0042 42 1 2.6943 10.6943 -1.3014 43 1 4.1717 11.6982 -0.9689 44 1 0.8732 12.7936 1.5212 45 1 5.1248 15.2833 1.5096 46 1 5.0962 12.8900 0.9341 47 1 5.0680 11.0818 1.4999 48 1 3.9667 9.8203 2.2036 49 1 1.3300 4.5113 0.0144 50 1 0.2125 2.3185 0.0030 There are 74 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 74 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_10156534_4974302.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:50:20 Heat of formation + Delta-G solvation = -101.277845 kcal Electronic energy + Delta-G solvation = -36487.375114 eV Core-core repulsion = 31195.730613 eV Total energy + Delta-G solvation = -5291.644501 eV No. of doubly occupied orbitals = 74 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 422.117 amu Computer time = 1.39 seconds Orbital eigenvalues (eV) -50.06555 -41.89738 -41.53022 -40.57489 -39.84681 -38.87080 -38.06286 -37.55431 -36.91626 -34.65716 -32.80838 -32.19477 -31.62133 -30.90134 -29.34502 -27.95130 -26.69806 -26.58704 -26.06720 -24.33778 -23.84665 -22.79399 -22.40578 -21.87384 -20.29554 -19.52600 -19.01505 -18.79965 -18.45967 -18.05607 -17.76203 -17.56918 -17.41586 -17.09181 -16.87577 -16.78375 -16.59674 -16.10816 -15.92969 -15.78008 -15.53165 -15.43607 -15.37103 -15.04567 -14.79338 -14.48230 -14.47381 -14.31326 -14.16584 -14.08296 -13.78028 -13.62193 -13.52549 -13.43795 -13.37674 -13.02747 -12.62142 -12.53417 -12.47109 -12.36907 -12.30078 -12.02693 -11.83781 -11.64796 -11.43475 -11.30296 -11.29388 -11.22626 -10.99700 -10.16660 -10.08766 -10.06171 -9.60343 -8.81269 -4.93218 -0.15684 0.00763 0.07401 0.34331 0.92169 1.33962 1.42512 1.44471 1.58376 1.91606 2.30568 2.35865 2.55092 2.58110 3.01951 3.42210 3.47234 3.50871 3.55725 3.67110 3.68829 3.75065 3.86593 3.91486 3.96399 4.02802 4.09197 4.10079 4.10376 4.14534 4.16065 4.22011 4.28636 4.45650 4.46519 4.52310 4.62657 4.71280 4.77314 4.80398 4.80844 4.84039 4.85066 4.94056 4.98224 5.02726 5.08283 5.13107 5.14208 5.21816 5.35017 5.42716 5.58872 5.63343 6.14026 6.41875 6.47433 6.53499 7.12565 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.017 3.983 2 O -0.334 6.334 3 C 0.090 3.910 4 C -0.119 4.119 5 C -0.119 4.119 6 C -0.080 4.080 7 O -0.545 6.545 8 Si 0.809 3.191 9 C 0.090 3.910 10 O -0.316 6.316 11 C 0.036 3.964 12 C 0.516 3.484 13 O -0.569 6.569 14 N -0.692 5.692 15 C 0.114 3.886 16 H 0.085 0.915 17 C -0.123 4.123 18 C -0.063 4.063 19 H 0.122 0.878 20 C -0.064 4.064 21 C -0.079 4.079 22 C -0.087 4.087 23 Cl -0.062 7.062 24 C 0.077 3.923 25 F -0.143 7.143 26 C -0.140 4.140 27 C -0.081 4.081 28 C -0.144 4.144 29 C -0.159 4.159 30 C -0.162 4.162 31 H 0.068 0.932 32 H 0.114 0.886 33 H 0.066 0.934 34 H 0.151 0.849 35 H 0.062 0.938 36 H 0.372 0.628 37 H -0.294 1.294 38 H -0.265 1.265 39 H 0.123 0.877 40 H 0.127 0.873 41 H 0.422 0.578 42 H 0.094 0.906 43 H 0.104 0.896 44 H 0.160 0.840 45 H 0.158 0.842 46 H 0.162 0.838 47 H 0.100 0.900 48 H 0.070 0.930 49 H 0.169 0.831 50 H 0.161 0.839 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -8.559 -1.550 -2.011 8.927 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.077 4.077 2 O -0.248 6.248 3 C 0.045 3.955 4 C -0.137 4.137 5 C -0.120 4.120 6 C -0.187 4.187 7 O -0.351 6.351 8 Si 0.710 3.290 9 C 0.045 3.955 10 O -0.230 6.230 11 C -0.041 4.041 12 C 0.302 3.698 13 O -0.447 6.447 14 N -0.346 5.346 15 C 0.009 3.991 16 H 0.103 0.897 17 C -0.161 4.161 18 C -0.081 4.081 19 H 0.140 0.860 20 C -0.064 4.064 21 C -0.098 4.098 22 C -0.114 4.114 23 Cl -0.034 7.034 24 C 0.057 3.943 25 F -0.122 7.122 26 C -0.159 4.159 27 C -0.099 4.099 28 C -0.183 4.183 29 C -0.177 4.177 30 C -0.180 4.180 31 H 0.086 0.914 32 H 0.132 0.868 33 H 0.085 0.915 34 H 0.168 0.832 35 H 0.080 0.920 36 H 0.221 0.779 37 H -0.222 1.222 38 H -0.191 1.191 39 H 0.140 0.860 40 H 0.145 0.855 41 H 0.260 0.740 42 H 0.112 0.888 43 H 0.122 0.878 44 H 0.178 0.822 45 H 0.176 0.824 46 H 0.180 0.820 47 H 0.119 0.881 48 H 0.089 0.911 49 H 0.186 0.814 50 H 0.179 0.821 Dipole moment (debyes) X Y Z Total from point charges -6.776 -2.639 -1.369 7.399 hybrid contribution -1.042 2.690 0.700 2.969 sum -7.818 0.051 -0.669 7.846 Atomic orbital electron populations 1.23354 0.76383 1.05603 1.02370 1.86086 1.23391 1.26371 1.88937 1.18984 0.91940 0.85375 0.99217 1.20181 0.92438 0.96805 1.04296 1.19449 0.95995 0.91022 1.05522 1.25479 0.92853 1.12378 0.88025 1.86662 1.74245 1.42244 1.31957 0.92226 0.76267 0.79154 0.81338 1.18780 0.91711 0.84241 1.00734 1.86085 1.35547 1.11922 1.89443 1.22733 0.92660 0.81876 1.06878 1.20500 0.88289 0.85433 0.75533 1.90779 1.16742 1.87310 1.49904 1.45335 1.11155 1.03624 1.74506 1.21860 0.95630 0.83885 0.97742 0.89690 1.23410 1.00963 0.95880 0.95857 1.21660 1.00304 0.89288 0.96880 0.85975 1.19900 0.91865 0.96551 0.98098 1.21120 1.00589 0.90657 0.97412 1.21235 0.86789 0.95179 1.08206 1.98402 1.33236 1.79734 1.91987 1.17837 0.94346 0.78593 1.03518 1.91514 1.97290 1.33018 1.90382 1.21403 0.96895 0.96310 1.01243 1.21311 0.99532 0.92403 0.96615 1.23605 0.98748 0.98576 0.97358 1.21374 0.92035 1.00014 1.04285 1.21427 1.01590 0.90948 1.04055 0.91376 0.86787 0.91548 0.83162 0.92003 0.77944 1.22200 1.19052 0.85960 0.85518 0.74024 0.88785 0.87772 0.82193 0.82395 0.82010 0.88142 0.91106 0.81409 0.82137 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.11 9.81 113.37 1.11 1.00 16 2 O -0.33 -0.51 10.50 -93.29 -0.98 -1.49 16 3 C 0.09 0.17 6.69 22.49 0.15 0.32 16 4 C -0.12 -0.44 8.59 22.35 0.19 -0.25 16 5 C -0.12 -0.60 5.27 -19.78 -0.10 -0.71 16 6 C -0.08 -0.59 2.33 71.24 0.17 -0.42 16 7 O -0.54 -4.91 12.65 -148.98 -1.89 -6.80 16 8 Si 0.81 3.95 30.17 68.60 2.07 6.02 16 9 C 0.09 0.19 6.62 22.49 0.15 0.34 16 10 O -0.32 -0.89 8.56 -74.31 -0.64 -1.53 16 11 C 0.04 -0.24 5.22 71.24 0.37 0.14 16 12 C 0.52 -0.59 7.91 87.66 0.69 0.10 16 13 O -0.57 -6.12 16.10 16.01 0.26 -5.87 16 14 N -0.69 6.02 5.26 -440.03 -2.32 3.70 16 15 C 0.11 -0.80 4.32 45.52 0.20 -0.60 16 16 H 0.08 -0.11 7.47 -2.39 -0.02 -0.13 16 17 C -0.12 1.39 7.29 31.12 0.23 1.62 16 18 C -0.06 0.70 3.86 -11.01 -0.04 0.66 16 19 H 0.12 -1.78 8.09 -2.39 -0.02 -1.80 16 20 C -0.06 0.44 5.29 -19.86 -0.11 0.33 16 21 C -0.08 0.33 9.49 22.28 0.21 0.54 16 22 C -0.09 -0.12 6.33 22.37 0.14 0.02 16 23 Cl -0.06 -0.22 28.62 -2.72 -0.08 -0.30 16 24 C 0.08 0.21 7.28 22.39 0.16 0.38 16 25 F -0.14 -1.02 16.84 44.97 0.76 -0.26 16 26 C -0.14 0.34 10.03 22.31 0.22 0.56 16 27 C -0.08 0.51 8.62 22.27 0.19 0.70 16 28 C -0.14 1.18 7.25 31.12 0.23 1.40 16 29 C -0.16 0.59 9.03 22.35 0.20 0.80 16 30 C -0.16 0.47 9.03 22.36 0.20 0.67 16 31 H 0.07 -0.60 7.66 -2.39 -0.02 -0.62 16 32 H 0.11 -1.02 8.14 -2.39 -0.02 -1.04 16 33 H 0.07 -0.58 7.66 -2.38 -0.02 -0.59 16 34 H 0.15 0.17 5.13 -2.91 -0.01 0.15 16 35 H 0.06 0.60 7.82 -2.39 -0.02 0.59 16 36 H 0.37 2.34 8.60 -74.06 -0.64 1.71 16 37 H -0.29 -3.31 7.11 99.48 0.71 -2.61 16 38 H -0.26 -1.83 7.11 99.48 0.71 -1.12 16 39 H 0.12 -1.52 7.65 -2.39 -0.02 -1.54 16 40 H 0.13 -1.65 7.67 -2.39 -0.02 -1.67 16 41 H 0.42 -6.86 8.70 -92.71 -0.81 -7.67 16 42 H 0.09 -1.24 8.14 -2.39 -0.02 -1.26 16 43 H 0.10 -1.16 7.73 -2.39 -0.02 -1.18 16 44 H 0.16 -1.32 8.05 -2.91 -0.02 -1.35 16 45 H 0.16 -0.87 8.06 -2.91 -0.02 -0.89 16 46 H 0.16 -1.74 6.64 -2.91 -0.02 -1.76 16 47 H 0.10 -0.86 6.29 -2.38 -0.01 -0.87 16 48 H 0.07 -0.43 8.14 -2.39 -0.02 -0.45 16 49 H 0.17 -1.96 6.29 -2.91 -0.02 -1.98 16 50 H 0.16 -1.39 6.29 -2.91 -0.02 -1.41 16 Total: 0.00 -27.81 433.40 1.39 -26.42 By element: Atomic # 1 Polarization: -27.13 SS G_CDS: -0.37 Total: -27.49 kcal Atomic # 6 Polarization: 3.03 SS G_CDS: 4.57 Total: 7.60 kcal Atomic # 7 Polarization: 6.02 SS G_CDS: -2.32 Total: 3.70 kcal Atomic # 8 Polarization: -12.44 SS G_CDS: -3.24 Total: -15.68 kcal Atomic # 9 Polarization: -1.02 SS G_CDS: 0.76 Total: -0.26 kcal Atomic # 14 Polarization: 3.95 SS G_CDS: 2.07 Total: 6.02 kcal Atomic # 17 Polarization: -0.22 SS G_CDS: -0.08 Total: -0.30 kcal Total: -27.81 1.39 -26.42 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10156534_4974302.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -74.861 kcal (2) G-P(sol) polarization free energy of solvation -27.807 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -102.668 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.390 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -26.417 kcal (6) G-S(sol) free energy of system = (1) + (5) -101.278 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.40 seconds